RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 IBSPP21815 317 aaPredicted RBP14.98□□□□□ -0.01
SGCA-201ENST00000262018 CEBPZQ03701 1054 aaKnown RBP14.98□□□□□ -0.01
SGCA-201ENST00000262018 QRICH1Q2TAL8 776 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 CWF19L1Q69YN2 538 aaKnown RBP14.98□□□□□ -0.01
SGCA-201ENST00000262018 TMEM184AQ6ZMB5 413 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 TSHZ1Q6ZSZ6 1077 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 RSPH3Q86UC2 560 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 RTN4RL1Q86UN2 441 aaPredicted RBP14.98□□□□□ -0.01
SGCA-201ENST00000262018 VSIG10LQ86VR7 867 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 CCDC105Q8IYK2 499 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 LINC00301Q8NCQ3 95 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 IL31RAQ8NI17 732 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 MTMR8Q96EF0 704 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 HINFPQ9BQA5 517 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 VAT1LQ9HCJ6 419 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 ZNF215Q9UL58 517 aaPredicted RBP14.98□□□□□ -0.01
SGCA-201ENST00000262018 CLIC4Q9Y696 253 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 BAZ2BQ9UIF8 2168 aaKnown RBP14.97□□□□□ -0.01
SGCA-201ENST00000262018 GOLGA6L4A6NEF3 574 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 ZBTB5O15062 677 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 PI15O43692 258 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 ARP10275 920 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 CD52P31358 61 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 KRT2P35908 639 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 TRAF1Q13077 416 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 PGM5Q15124 567 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 CCDC183Q5T5S1 534 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 PLPP4Q5VZY2 271 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 TAF2Q6P1X5 1199 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 CRIPAKQ8N1N5 446 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 RRP36Q96EU6 259 aaKnown RBP14.97□□□□□ -0.01
SGCA-201ENST00000262018 POMKQ9H5K3 350 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 AGO3Q9H9G7 860 aaKnown RBP14.97□□□□□ -0.01
SGCA-201ENST00000262018 LRFN2Q9ULH4 789 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 CDY2AQ9Y6F7 541 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 DMXL1Q9Y485 3027 aa14.97□□□□□ -0.01
SGCA-201ENST00000262018 CEP250Q9BV73 2442 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 NRCAMQ92823 1304 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 PNMA6FA0A0J9YX94 578 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 FGF18O76093 207 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 HOXB8P17481 243 aaPredicted RBP14.96□□□□□ -0.01
SGCA-201ENST00000262018 AOC1P19801 751 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 HSD17B4P51659 736 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 KCNC3Q14003 757 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 STK38Q15208 465 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 NPY5RQ15761 445 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 PDE12Q6L8Q7 609 aaKnown RBP14.96□□□□□ -0.01
SGCA-201ENST00000262018 HOMER1Q86YM7 354 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 DTWD2Q8NBA8 298 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 DNAJB3Q8WWF6 145 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 PIGSQ96S52 555 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 AMNQ9BXJ7 453 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 SEMA4AQ9H3S1 761 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 BRMS1Q9HCU9 246 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 AAASQ9NRG9 546 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 TMEM260Q9NX78 707 aa14.96□□□□□ -0.01
SGCA-201ENST00000262018 SEC63Q9UGP8 760 aaKnown RBP14.96□□□□□ -0.01
SGCA-201ENST00000262018 FSCN2O14926 492 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 SPTLC2O15270 562 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 CCND2P30279 289 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 NR5A1Q13285 461 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 SLC39A14Q15043 492 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 CES5AQ6NT32 575 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 CYFIP1Q7L576 1253 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 THNSL1Q8IYQ7 743 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 OXER1Q8TDS5 423 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 TNFRSF25Q93038 417 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 NECTIN4Q96NY8 510 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 GPR20Q99678 358 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 FTHL17Q9BXU8 183 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 DLL3Q9NYJ7 618 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 LIMD1Q9UGP4 676 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 R4GN57 208 aa14.95□□□□□ -0.02
SGCA-201ENST00000262018 A0A1W2PQ27 194 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 A0A1W2PQ64 194 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 A0A1W2PQD8 194 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 GOLGA6L3A6NEY3 463 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 OPLAHO14841 1288 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 LETM1O95202 739 aaPredicted RBP14.94□□□□□ -0.02
SGCA-201ENST00000262018 LIG1P18858 919 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 HOXA13P31271 388 aaPredicted RBP14.94□□□□□ -0.02
SGCA-201ENST00000262018 SP4Q02446 784 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 PTPAQ15257 358 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 SF3A1Q15459 793 aaKnown RBP14.94□□□□□ -0.02
SGCA-201ENST00000262018 TPRNQ4KMQ1 711 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 RILPL1Q5EBL4 403 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 ADALQ6DHV7 355 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 METTL7BQ6UX53 244 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 TDRD5Q8NAT2 981 aaKnown RBP14.94□□□□□ -0.02
SGCA-201ENST00000262018 CYP2W1Q8TAV3 490 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 RASGRP4Q8TDF6 673 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 PCDHA7Q9UN72 937 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 TELO2Q9Y4R8 837 aa14.94□□□□□ -0.02
SGCA-201ENST00000262018 PPP1R11O60927 126 aaPredicted RBP14.93□□□□□ -0.02
SGCA-201ENST00000262018 PPP6R2O75170 966 aa14.93□□□□□ -0.02
SGCA-201ENST00000262018 NPR3P17342 541 aa14.93□□□□□ -0.02
SGCA-201ENST00000262018 ME1P48163 572 aa14.93□□□□□ -0.02
SGCA-201ENST00000262018 TOB1P50616 345 aaPredicted RBP14.93□□□□□ -0.02
SGCA-201ENST00000262018 NLRP5P59047 1200 aa14.93□□□□□ -0.02
SGCA-201ENST00000262018 MRPS6P82932 125 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms