RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 TIMP1P01033 207 aa12.92□□□□□ -0.34
PFDN1-201ENST00000261813 RPA1P27694 616 aa12.92□□□□□ -0.34
PFDN1-201ENST00000261813 CYP2C18P33260 490 aa12.92□□□□□ -0.34
PFDN1-201ENST00000261813 RBL2Q08999 1139 aa12.92□□□□□ -0.34
PFDN1-201ENST00000261813 TARBP2Q15633 366 aaKnown RBP12.92□□□□□ -0.34
PFDN1-201ENST00000261813 MTHFD1LQ6UB35 978 aa12.92□□□□□ -0.34
PFDN1-201ENST00000261813 ERMNQ8TAM6 284 aa12.92□□□□□ -0.34
PFDN1-201ENST00000261813 SNX29Q8TEQ0 813 aa12.92□□□□□ -0.34
PFDN1-201ENST00000261813 GDF15Q99988 308 aa12.92□□□□□ -0.34
PFDN1-201ENST00000261813 GDPD2Q9HCC8 539 aa12.92□□□□□ -0.34
PFDN1-201ENST00000261813 TUFT1Q9NNX1 390 aa12.92□□□□□ -0.34
PFDN1-201ENST00000261813 PRKAG2Q9UGJ0 569 aa12.92□□□□□ -0.34
PFDN1-201ENST00000261813 SRPRBQ9Y5M8 271 aaKnown RBP12.92□□□□□ -0.34
PFDN1-201ENST00000261813 MYH9P35579 1960 aaKnown RBP12.91□□□□□ -0.34
PFDN1-201ENST00000261813 A0A087WWV3 80 aa12.91□□□□□ -0.34
PFDN1-201ENST00000261813 RBAK-RBAKDNI3L0D1 243 aa12.91□□□□□ -0.34
PFDN1-201ENST00000261813 RAG1P15918 1043 aa12.91□□□□□ -0.34
PFDN1-201ENST00000261813 KLRC1P26715 233 aa12.91□□□□□ -0.34
PFDN1-201ENST00000261813 YWHABP31946 246 aaKnown RBP12.91□□□□□ -0.34
PFDN1-201ENST00000261813 CCT6AP40227 531 aaKnown RBP12.91□□□□□ -0.34
PFDN1-201ENST00000261813 NPEPPSP55786 919 aa12.91□□□□□ -0.34
PFDN1-201ENST00000261813 MTERF2Q49AM1 385 aa12.91□□□□□ -0.34
PFDN1-201ENST00000261813 HAUS3Q68CZ6 603 aa12.91□□□□□ -0.34
PFDN1-201ENST00000261813 TRAF7Q6Q0C0 670 aa12.91□□□□□ -0.34
PFDN1-201ENST00000261813 DEFB123Q8N688 67 aa12.91□□□□□ -0.34
PFDN1-201ENST00000261813 ANKK1Q8NFD2 765 aa12.91□□□□□ -0.34
PFDN1-201ENST00000261813 SYAP1Q96A49 352 aaPredicted RBP12.91□□□□□ -0.34
PFDN1-201ENST00000261813 CLIC6Q96NY7 704 aa12.91□□□□□ -0.34
PFDN1-201ENST00000261813 PYM1Q9BRP8 204 aaKnown RBP12.91□□□□□ -0.34
PFDN1-201ENST00000261813 WNT8AQ9H1J5 351 aa12.91□□□□□ -0.34
PFDN1-201ENST00000261813 PCDHA2Q9Y5H9 948 aa12.91□□□□□ -0.34
PFDN1-201ENST00000261813 TRIP12Q14669 1992 aaPredicted RBP12.9□□□□□ -0.34
PFDN1-201ENST00000261813 TRAK2O60296 914 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 CKBP12277 381 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 CMA1P23946 247 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 LONP1P36776 959 aaKnown RBP12.9□□□□□ -0.34
PFDN1-201ENST00000261813 CCL23P55773 120 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 BFSP2Q13515 415 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 KLHL40Q2TBA0 621 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 KRT79Q5XKE5 535 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 TAF2Q6P1X5 1199 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 CAGE1Q8TC20 777 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 PIGOQ8TEQ8 1089 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 DNAJB3Q8WWF6 145 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 BADQ92934 168 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 SCLYQ96I15 445 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 AK8Q96MA6 479 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 CSRNP2Q9H175 543 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 CYP26B1Q9NR63 512 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 FAM13BQ9NYF5 915 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 PCDHA7Q9UN72 937 aa12.9□□□□□ -0.34
PFDN1-201ENST00000261813 SMIM35A0A1B0GVV1 85 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 SMAPO00193 183 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 MUTP22033 750 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 THPOP40225 353 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 MAGEA10P43363 369 aaPredicted RBP12.89□□□□□ -0.35
PFDN1-201ENST00000261813 RARRES1P49788 294 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 MDM2Q00987 491 aaPredicted RBP12.89□□□□□ -0.35
PFDN1-201ENST00000261813 LRIT3Q3SXY7 679 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 SPECC1Q5M775 1068 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 HYIQ5T013 277 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 ZNF618Q5T7W0 954 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 MFSD5Q6N075 450 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 CCDC73Q6ZRK6 1079 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 NUDT18Q6ZVK8 323 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 USP49Q70CQ1 688 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 RPAINQ86UA6 219 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 CABP7Q86V35 215 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 CCDC155Q8N6L0 562 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 LINC01465Q8N7H1 131 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 CCDC34Q96HJ3 373 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 CEP170P1Q96L14 293 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 PNMA5Q96PV4 448 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 FAM49AQ9H0Q0 323 aaPredicted RBP12.89□□□□□ -0.35
PFDN1-201ENST00000261813 ANKEF1Q9NU02 776 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 DDX19AQ9NUU7 478 aaKnown RBP12.89□□□□□ -0.35
PFDN1-201ENST00000261813 KIAA1024Q9UPX6 916 aa12.89□□□□□ -0.35
PFDN1-201ENST00000261813 IGKV6-21A0A0C4DH24 114 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 MAGEB2O15479 319 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 MAFO75444 373 aaPredicted RBP12.88□□□□□ -0.35
PFDN1-201ENST00000261813 CTSHP09668 335 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 IQCF3P0C7M6 154 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 XRCC6P12956 609 aaKnown RBP eCLIP12.88□□□□□ -0.35
PFDN1-201ENST00000261813 SELPP16109 830 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 TXLNAP40222 546 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 CLCN3P51790 818 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 TBC1D8BQ0IIM8 1120 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 GRB10Q13322 594 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 DRP2Q13474 957 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 GPNMBQ14956 572 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 XKR9Q5GH70 373 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 LRRC8DQ7L1W4 858 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 OTUD6AQ7L8S5 288 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 KCNK18Q7Z418 384 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 KIAA0319LQ8IZA0 1049 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 TDHQ8IZJ6 230 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 LRRC71Q8N4P6 559 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 RETREG2Q8NC44 543 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 MRPS27Q92552 414 aaKnown RBP12.88□□□□□ -0.35
PFDN1-201ENST00000261813 VWCEQ96DN2 955 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms