RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 RNF43Q68DV7 783 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 VSIG1Q86XK7 387 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 IFNL2Q8IZJ0 200 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 ERP27Q96DN0 273 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 TGS1Q96RS0 853 aaKnown RBP14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 KIAA1683Q9H0B3 1180 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 PREBQ9HCU5 417 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 NLRP2Q9NX02 1062 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 PCDHA6Q9UN73 950 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 PCDHA8Q9Y5H6 950 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 M0R2N6 131 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 NVLO15381 856 aaKnown RBP14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 CREB3O43889 395 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 ATP9AO75110 1047 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 SERPINB4P48594 390 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 LRRC63Q05C16 580 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 ADCY1Q08828 1119 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 BICDL1Q6ZP65 573 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 RBM12BQ8IXT5 1001 aaKnown RBP14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 NRG4Q8WWG1 115 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 SLC7A6OSQ96CW6 309 aaPredicted RBP14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 GANQ9H2C0 597 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 MAGEF1Q9HAY2 307 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 TMEM165Q9HC07 324 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 TXLNGQ9NUQ3 528 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 CTNNAL1Q9UBT7 734 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 COL4A3BPQ9Y5P4 624 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 NUP188Q5SRE5 1749 aa14.36□□□□□ -0.11
TUBGCP4-201ENST00000260383 TRAF5O00463 557 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 ECEL1O95672 775 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 CALM1P0DP23 149 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 CALM2P0DP24 149 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 CALM3P0DP25 149 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 RPL21P46778 160 aaKnown RBP14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 AMPD3Q01432 767 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 KHDC1Q4VXA5 237 aaKnown RBP14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 AADACL2Q6P093 401 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 SEPT14Q6ZU15 432 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 ARHGAP27Q6ZUM4 889 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 C18orf8Q96DM3 657 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 TMEM109Q9BVC6 243 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 OSGEPQ9NPF4 335 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 METTL5Q9NRN9 209 aaKnown RBP14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 PHF24Q9UPV7 400 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 T-ENOLP0DO92 83 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 KCNA3P22001 575 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 CALML3P27482 149 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 TPP2P29144 1249 aaPredicted RBP14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 MAGEA8P43361 318 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 ZNF449Q6P9G9 518 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 BTNL9Q6UXG8 535 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 DDX50Q9BQ39 737 aaKnown RBP14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 ZWILCHQ9H900 591 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 DMAP1Q9NPF5 467 aaPredicted RBP14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 ATP8A2Q9NTI2 1148 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 BLOC1S4Q9NUP1 217 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 PPP1R9AQ9ULJ8 1098 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 CHKBQ9Y259 395 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 PCDHGA4Q9Y5G9 962 aa14.35□□□□□ -0.11
TUBGCP4-201ENST00000260383 PFASO15067 1338 aa14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 DDAH1O94760 285 aa14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 UNC13DQ70J99 1090 aa14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 AGGF1Q8N302 714 aaeCLIP14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 OPTNQ96CV9 577 aa14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 SEC63Q9UGP8 760 aaKnown RBP14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 CYP1A1P04798 512 aaPredicted RBP14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 TNIP1Q15025 636 aa14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 RFWD3Q6PCD5 774 aa14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 INTS8Q75QN2 995 aaKnown RBP14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 SV2BQ7L1I2 683 aa14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 SDCCAG8Q86SQ7 713 aaPredicted RBP14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 ZC3H18Q86VM9 953 aaKnown RBP14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 CCDC25Q86WR0 208 aa14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 DCAF5Q96JK2 942 aa14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 STMN4Q9H169 189 aaPredicted RBP14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 MMADHCQ9H3L0 296 aaPredicted RBP14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 GALNT8Q9NY28 637 aa14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 BLOC1S6Q9UL45 172 aa14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 USP20Q9Y2K6 914 aa14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 LRCH1Q9Y2L9 728 aa14.34□□□□□ -0.11
TUBGCP4-201ENST00000260383 ANKRD63C9JTQ0 380 aa14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 DDX3YO15523 660 aaKnown RBP14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 CBX6O95503 412 aa14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 PLCG2P16885 1265 aa14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 SLC9A1P19634 815 aa14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 MCL1Q07820 350 aa14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 CCDC15Q0P6D6 951 aa14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 MAPK7Q13164 816 aa14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 MTFR1Q15390 333 aa14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 ESCO1Q5FWF5 840 aa14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 FAM47AQ5JRC9 791 aa14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 MFSD5Q6N075 450 aa14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 SCG3Q8WXD2 468 aaKnown RBP14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 FGFBP2Q9BYJ0 223 aa14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 ANAPC4Q9UJX5 808 aa14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.33□□□□□ -0.11
TUBGCP4-201ENST00000260383 GLI3P10071 1580 aa14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 KIF1AQ12756 1690 aa14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 SPATA31D3P0C874 917 aa14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 KRT13P13646 458 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms