RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 DGAT1O75907 488 aa18.65■□□□□ 0.58
SDCBP-201ENST00000260130 BRD1O95696 1058 aa18.65■□□□□ 0.58
SDCBP-201ENST00000260130 MARCKSP29966 332 aaPredicted RBP18.65■□□□□ 0.58
SDCBP-201ENST00000260130 LONP1P36776 959 aaKnown RBP18.65■□□□□ 0.58
SDCBP-201ENST00000260130 EMC2Q15006 297 aa18.65■□□□□ 0.58
SDCBP-201ENST00000260130 SLC39A14Q15043 492 aa18.65■□□□□ 0.58
SDCBP-201ENST00000260130 APBB2Q92870 758 aa18.65■□□□□ 0.58
SDCBP-201ENST00000260130 ADAMTS10Q9H324 1103 aa18.65■□□□□ 0.58
SDCBP-201ENST00000260130 AGO3Q9H9G7 860 aaKnown RBP18.65■□□□□ 0.58
SDCBP-201ENST00000260130 BMP2KQ9NSY1 1161 aaPredicted RBP18.65■□□□□ 0.58
SDCBP-201ENST00000260130 DDX19AQ9NUU7 478 aaKnown RBP18.65■□□□□ 0.58
SDCBP-201ENST00000260130 TFIP11Q9UBB9 837 aaKnown RBP18.65■□□□□ 0.58
SDCBP-201ENST00000260130 TET1Q8NFU7 2136 aa18.65■□□□□ 0.58
SDCBP-201ENST00000260130 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.65■□□□□ 0.58
SDCBP-201ENST00000260130 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.65■□□□□ 0.58
SDCBP-201ENST00000260130 EFCAB14O75071 495 aa18.65■□□□□ 0.58
SDCBP-201ENST00000260130 GRIN1Q05586 938 aa18.65■□□□□ 0.58
SDCBP-201ENST00000260130 OSMRQ99650 979 aa18.65■□□□□ 0.58
SDCBP-201ENST00000260130 MTRQ99707 1265 aa18.65■□□□□ 0.58
SDCBP-201ENST00000260130 CD52P31358 61 aa18.64■□□□□ 0.57
SDCBP-201ENST00000260130 GPC3P51654 580 aa18.64■□□□□ 0.57
SDCBP-201ENST00000260130 FOXD4L6Q3SYB3 417 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-201ENST00000260130 FOXD4L3Q6VB84 417 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-201ENST00000260130 TMEM40Q8WWA1 233 aa18.64■□□□□ 0.57
SDCBP-201ENST00000260130 TCP11Q8WWU5 503 aa18.64■□□□□ 0.57
SDCBP-201ENST00000260130 TMEM143Q96AN5 459 aa18.64■□□□□ 0.57
SDCBP-201ENST00000260130 DNM3Q9UQ16 869 aa18.64■□□□□ 0.57
SDCBP-201ENST00000260130 SRPRBQ9Y5M8 271 aaKnown RBP18.64■□□□□ 0.57
SDCBP-201ENST00000260130 MORC2Q9Y6X9 1032 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-201ENST00000260130 SOX1O00570 391 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-201ENST00000260130 MSNP26038 577 aaKnown RBP18.64■□□□□ 0.57
SDCBP-201ENST00000260130 KCNJ6P48051 423 aa18.64■□□□□ 0.57
SDCBP-201ENST00000260130 ZRSR1Q15695 479 aaKnown RBP18.64■□□□□ 0.57
SDCBP-201ENST00000260130 LRSAM1Q6UWE0 723 aa18.64■□□□□ 0.57
SDCBP-201ENST00000260130 RHPN2Q8IUC4 686 aa18.64■□□□□ 0.57
SDCBP-201ENST00000260130 PRPF31Q8WWY3 499 aaKnown RBP18.64■□□□□ 0.57
SDCBP-201ENST00000260130 EVPLQ92817 2033 aa18.64■□□□□ 0.57
SDCBP-201ENST00000260130 ZNF668Q96K58 619 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-201ENST00000260130 ATP6V0A4Q9HBG4 840 aa18.64■□□□□ 0.57
SDCBP-201ENST00000260130 XPNPEP1Q9NQW7 623 aa18.64■□□□□ 0.57
SDCBP-201ENST00000260130 FBXO2Q9UK22 296 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-201ENST00000260130 PADI3Q9ULW8 664 aa18.64■□□□□ 0.57
SDCBP-201ENST00000260130 NOC2LQ9Y3T9 749 aaKnown RBP18.64■□□□□ 0.57
SDCBP-201ENST00000260130 ARHGEF35A5YM69 484 aa18.63■□□□□ 0.57
SDCBP-201ENST00000260130 RPS6KA5O75582 802 aa18.63■□□□□ 0.57
SDCBP-201ENST00000260130 UBA7P41226 1012 aa18.63■□□□□ 0.57
SDCBP-201ENST00000260130 WDR5P61964 334 aaKnown RBP18.63■□□□□ 0.57
SDCBP-201ENST00000260130 PAK2Q13177 524 aa18.63■□□□□ 0.57
SDCBP-201ENST00000260130 HYIQ5T013 277 aa18.63■□□□□ 0.57
SDCBP-201ENST00000260130 FAM109BQ6ICB4 259 aaPredicted RBP18.63■□□□□ 0.57
SDCBP-201ENST00000260130 CABP7Q86V35 215 aa18.63■□□□□ 0.57
SDCBP-201ENST00000260130 KCTD17Q8N5Z5 321 aa18.63■□□□□ 0.57
SDCBP-201ENST00000260130 LINC00301Q8NCQ3 95 aa18.63■□□□□ 0.57
SDCBP-201ENST00000260130 PHOSPHO2Q8TCD6 241 aa18.63■□□□□ 0.57
SDCBP-201ENST00000260130 NLRP7Q8WX94 980 aa18.63■□□□□ 0.57
SDCBP-201ENST00000260130 PSPC1Q8WXF1 523 aaKnown RBP18.63■□□□□ 0.57
SDCBP-201ENST00000260130 SCLT1Q96NL6 688 aa18.63■□□□□ 0.57
SDCBP-201ENST00000260130 NT5C3AQ9H0P0 336 aa18.63■□□□□ 0.57
SDCBP-201ENST00000260130 RBSNQ9H1K0 784 aa18.63■□□□□ 0.57
SDCBP-201ENST00000260130 USO1O60763 962 aaKnown RBP18.62■□□□□ 0.57
SDCBP-201ENST00000260130 ATP2A2P16615 1042 aaKnown RBP18.62■□□□□ 0.57
SDCBP-201ENST00000260130 EIF4BP23588 611 aaKnown RBP18.62■□□□□ 0.57
SDCBP-201ENST00000260130 FXR1P51114 621 aaKnown RBP eCLIP18.62■□□□□ 0.57
SDCBP-201ENST00000260130 SMAD3P84022 425 aaKnown RBP18.62■□□□□ 0.57
SDCBP-201ENST00000260130 STK38Q15208 465 aa18.62■□□□□ 0.57
SDCBP-201ENST00000260130 PADI6Q6TGC4 694 aa18.62■□□□□ 0.57
SDCBP-201ENST00000260130 KSR1Q8IVT5 923 aa18.62■□□□□ 0.57
SDCBP-201ENST00000260130 CSRNP2Q9H175 543 aa18.62■□□□□ 0.57
SDCBP-201ENST00000260130 BHMT2Q9H2M3 363 aa18.62■□□□□ 0.57
SDCBP-201ENST00000260130 COL4A3BPQ9Y5P4 624 aa18.62■□□□□ 0.57
SDCBP-201ENST00000260130 E9PMD0 336 aa18.62■□□□□ 0.57
SDCBP-201ENST00000260130 SLC26A4O43511 780 aa18.62■□□□□ 0.57
SDCBP-201ENST00000260130 NFX1Q12986 1120 aaKnown RBP18.62■□□□□ 0.57
SDCBP-201ENST00000260130 ODR4Q5SWX8 454 aa18.62■□□□□ 0.57
SDCBP-201ENST00000260130 ATL3Q6DD88 541 aa18.62■□□□□ 0.57
SDCBP-201ENST00000260130 ZNF410Q86VK4 478 aa18.62■□□□□ 0.57
SDCBP-201ENST00000260130 CDK5RAP3Q96JB5 506 aa18.62■□□□□ 0.57
SDCBP-201ENST00000260130 PNMA5Q96PV4 448 aa18.62■□□□□ 0.57
SDCBP-201ENST00000260130 SLC9A7Q96T83 725 aa18.62■□□□□ 0.57
SDCBP-201ENST00000260130 A0A087WZ62 844 aa18.61■□□□□ 0.57
SDCBP-201ENST00000260130 GRXCR1A8MXD5 290 aa18.61■□□□□ 0.57
SDCBP-201ENST00000260130 GPR182O15218 404 aa18.61■□□□□ 0.57
SDCBP-201ENST00000260130 ASAP2O43150 1006 aa18.61■□□□□ 0.57
SDCBP-201ENST00000260130 YEATS4O95619 227 aa18.61■□□□□ 0.57
SDCBP-201ENST00000260130 EYA4O95677 639 aa18.61■□□□□ 0.57
SDCBP-201ENST00000260130 GRB10Q13322 594 aa18.61■□□□□ 0.57
SDCBP-201ENST00000260130 KRI1Q8N9T8 703 aaKnown RBP18.61■□□□□ 0.57
SDCBP-201ENST00000260130 LRCH3Q96II8 777 aa18.61■□□□□ 0.57
SDCBP-201ENST00000260130 FDXACB1Q9BRP7 624 aaPredicted RBP18.61■□□□□ 0.57
SDCBP-201ENST00000260130 GCOM2Q9BZD3 368 aaPredicted RBP18.61■□□□□ 0.57
SDCBP-201ENST00000260130 ST3GAL5Q9UNP4 418 aa18.61■□□□□ 0.57
SDCBP-201ENST00000260130 SPTLC2O15270 562 aa18.61■□□□□ 0.57
SDCBP-201ENST00000260130 DARSP14868 501 aaKnown RBP18.61■□□□□ 0.57
SDCBP-201ENST00000260130 LAMTOR4Q0VGL1 99 aa18.61■□□□□ 0.57
SDCBP-201ENST00000260130 MXD4Q14582 209 aaPredicted RBP18.61■□□□□ 0.57
SDCBP-201ENST00000260130 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.61■□□□□ 0.57
SDCBP-201ENST00000260130 KCNK18Q7Z418 384 aa18.61■□□□□ 0.57
SDCBP-201ENST00000260130 FAM228AQ86W67 206 aa18.61■□□□□ 0.57
SDCBP-201ENST00000260130 MCPH1Q8NEM0 835 aa18.61■□□□□ 0.57
SDCBP-201ENST00000260130 SYAP1Q96A49 352 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms