RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 GTPBP4Q9BZE4 634 aaKnown RBP3.91□□□□□ -1.78
PHTF2-201ENST00000248550 USP29Q9HBJ7 922 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 NYAP2Q9P242 653 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 VPS4AQ9UN37 437 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 ZSCAN5CA6NGD5 496 aaPredicted RBP3.91□□□□□ -1.78
PHTF2-201ENST00000248550 EIF3CLB5ME19 914 aaKnown RBP3.91□□□□□ -1.78
PHTF2-201ENST00000248550 N4BP3O15049 544 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 CAPN5O15484 640 aaPredicted RBP3.91□□□□□ -1.78
PHTF2-201ENST00000248550 IL1R1P14778 569 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 SCP2P22307 547 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 AXLP30530 894 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 SFNP31947 248 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 MRPS9P82933 396 aaKnown RBP3.91□□□□□ -1.78
PHTF2-201ENST00000248550 SETQ01105 290 aaPredicted RBP3.91□□□□□ -1.78
PHTF2-201ENST00000248550 SMARCB1Q12824 385 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 POSTNQ15063 836 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 ALDH1L2Q3SY69 923 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 PPM1JQ5JR12 505 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 HFE2Q6ZVN8 426 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 MOB2Q70IA6 237 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 SPATA2LQ8IUW3 424 aaPredicted RBP3.91□□□□□ -1.78
PHTF2-201ENST00000248550 AVL9Q8NBF6 648 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 SNIP1Q8TAD8 396 aaKnown RBP3.91□□□□□ -1.78
PHTF2-201ENST00000248550 CALML4Q96GE6 196 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 UROC1Q96N76 676 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 MED10Q9BTT4 135 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 RAVER2Q9HCJ3 691 aaKnown RBP3.91□□□□□ -1.78
PHTF2-201ENST00000248550 TBC1D22BQ9NU19 505 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 UTP6Q9NYH9 597 aaKnown RBP3.91□□□□□ -1.78
PHTF2-201ENST00000248550 FTSJ1Q9UET6 329 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 DSEQ9UL01 958 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 PCDHGA5Q9Y5G8 931 aa3.91□□□□□ -1.78
PHTF2-201ENST00000248550 ACTN4O43707 911 aaKnown RBP3.9□□□□□ -1.78
PHTF2-201ENST00000248550 TNNC2P02585 160 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 CA3P07451 260 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 GLUD2P49448 558 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 WTAPQ15007 396 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 USP41Q3LFD5 358 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 CDC42EP5Q6NZY7 148 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 GIMAP6Q6P9H5 292 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 SND1Q7KZF4 910 aaKnown RBP eCLIP3.9□□□□□ -1.78
PHTF2-201ENST00000248550 GET4Q7L5D6 327 aaPredicted RBP3.9□□□□□ -1.78
PHTF2-201ENST00000248550 GLIS3Q8NEA6 775 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 P2RX5Q93086 422 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 TRIM5Q9C035 493 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 GREM2Q9H772 168 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 SEC31BQ9NQW1 1179 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 DAGLAQ9Y4D2 1042 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 ARHGEF35A5YM69 484 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 CHL1O00533 1208 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 IKBKBO14920 756 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 EIF3DO15371 548 aaKnown RBP eCLIP3.9□□□□□ -1.78
PHTF2-201ENST00000248550 ZNF217O75362 1048 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 PTPN2P17706 415 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 STIM1Q13586 685 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 NCAPHQ15003 741 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 PDGFRLQ15198 375 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 CXCL17Q6UXB2 119 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 ATG14Q6ZNE5 492 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 CATSPERGQ6ZRH7 1159 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 PRICKLE2Q7Z3G6 844 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 KDELC2Q7Z4H8 507 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 SYNPOQ8N3V7 929 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 TRIML1Q8N9V2 468 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 SEC14L1Q92503 715 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 CFAP36Q96G28 342 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 EDEM2Q9BV94 578 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 IDI2Q9BXS1 227 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 EHD4Q9H223 541 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 CDHR5Q9HBB8 845 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 ARHGEF3Q9NR81 526 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 SQORQ9Y6N5 450 aa3.9□□□□□ -1.78
PHTF2-201ENST00000248550 A0A087X0B3 334 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 LRRC72A6NJI9 287 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 IGF2BP3O00425 579 aaKnown RBP eCLIP3.9□□□□□ -1.79
PHTF2-201ENST00000248550 ADH1CP00326 375 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 DDX6P26196 483 aaKnown RBP eCLIP3.9□□□□□ -1.79
PHTF2-201ENST00000248550 NUDT1P36639 197 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 AMPD3Q01432 767 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 BMT2Q1RMZ1 405 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 TSR1Q2NL82 804 aaKnown RBP3.9□□□□□ -1.79
PHTF2-201ENST00000248550 RBM23Q86U06 439 aaKnown RBP3.9□□□□□ -1.79
PHTF2-201ENST00000248550 STK11IPQ8N1F8 1099 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 TTC39CQ8N584 583 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 BEST2Q8NFU1 509 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 LRCH3Q96II8 777 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 ZNF560Q96MR9 790 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 MOV10L1Q9BXT6 1211 aaKnown RBP3.9□□□□□ -1.79
PHTF2-201ENST00000248550 MIR1-1HGQ9H1L0 117 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 POLLQ9UGP5 575 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 GAS7O60861 476 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 APBB3O95704 486 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 SLC2A4P14672 509 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 CREB1P16220 341 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 RXRAP19793 462 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 ADSLP30566 484 aaPredicted RBP3.9□□□□□ -1.79
PHTF2-201ENST00000248550 HNRNPH1P31943 449 aaKnown RBP3.9□□□□□ -1.79
PHTF2-201ENST00000248550 NOS2P35228 1153 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 ZXDAP98168 799 aa3.9□□□□□ -1.79
PHTF2-201ENST00000248550 CREB5Q02930 508 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms