RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 RPA1P27694 616 aa17.01■□□□□ 0.31
SIN3B-201ENST00000248054 TNFAIP2Q03169 654 aa17.01■□□□□ 0.31
SIN3B-201ENST00000248054 E2F5Q15329 346 aa17.01■□□□□ 0.31
SIN3B-201ENST00000248054 SNCBQ16143 134 aa17.01■□□□□ 0.31
SIN3B-201ENST00000248054 PACS2Q86VP3 889 aa17.01■□□□□ 0.31
SIN3B-201ENST00000248054 MICAL1Q8TDZ2 1067 aa17.01■□□□□ 0.31
SIN3B-201ENST00000248054 RNF34Q969K3 372 aa17.01■□□□□ 0.31
SIN3B-201ENST00000248054 L2HGDHQ9H9P8 463 aa17.01■□□□□ 0.31
SIN3B-201ENST00000248054 PASKQ96RG2 1323 aa17.01■□□□□ 0.31
SIN3B-201ENST00000248054 SH3BGRP55822 239 aaPredicted RBP17.01■□□□□ 0.31
SIN3B-201ENST00000248054 CCDC89Q8N998 374 aa17.01■□□□□ 0.31
SIN3B-201ENST00000248054 RDM1Q8NG50 284 aa17.01■□□□□ 0.31
SIN3B-201ENST00000248054 CFAP57Q96MR6 1250 aa17.01■□□□□ 0.31
SIN3B-201ENST00000248054 ZBTB12Q9Y330 459 aaPredicted RBP17.01■□□□□ 0.31
SIN3B-201ENST00000248054 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
SIN3B-201ENST00000248054 ASB14A6NK59 587 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 SNRPFP62306 86 aaKnown RBP17■□□□□ 0.31
SIN3B-201ENST00000248054 ST3GAL1Q11201 340 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 TTLL4Q14679 1199 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 FBXW10Q5XX13 1052 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 AFAP1L2Q8N4X5 818 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 RAB3IPQ96QF0 476 aaPredicted RBP17■□□□□ 0.31
SIN3B-201ENST00000248054 EPHB4P54760 987 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 ANKRD40Q6AI12 368 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 FAM83AQ86UY5 434 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 CLEC10AQ8IUN9 316 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 POLR3CQ9BUI4 534 aaPredicted RBP17■□□□□ 0.31
SIN3B-201ENST00000248054 GAKO14976 1311 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 SFI1A8K8P3 1242 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 PCK1P35558 622 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 GKAP1Q5VSY0 366 aaPredicted RBP17■□□□□ 0.31
SIN3B-201ENST00000248054 MCUR1Q96AQ8 359 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 TMEM60Q9H2L4 133 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 VCXQ9H320 206 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 HAUS2Q9NVX0 235 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 GABBR1Q9UBS5 961 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 SLC9A2Q9UBY0 812 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 DNAJC12Q9UKB3 198 aa17■□□□□ 0.31
SIN3B-201ENST00000248054 SETD1AO15047 1707 aaKnown RBP17■□□□□ 0.31
SIN3B-201ENST00000248054 I3L4J1 428 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 SLC8A1P32418 973 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 HMGCS2P54868 508 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 ENOSF1Q7L5Y1 443 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 IDI2Q9BXS1 227 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 VCX3BQ9H321 246 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 BCAP29Q9UHQ4 241 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 TEX33O43247 280 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 LRRN2O75325 713 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 FCER1AP12319 257 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 GMPSP49915 693 aaPredicted RBP16.99■□□□□ 0.31
SIN3B-201ENST00000248054 FAM47CQ5HY64 1035 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 EP400NLQ6ZTU2 488 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 ADGRG1Q9Y653 693 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 MAPK4P31152 587 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 CAP2P40123 477 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 AP3M2P53677 418 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 NR1I3Q14994 352 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 MAP7D3Q8IWC1 876 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 HINFPQ9BQA5 517 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 RPF1Q9H9Y2 349 aaKnown RBP16.99■□□□□ 0.31
SIN3B-201ENST00000248054 SATB1Q01826 763 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 ITIH3Q06033 890 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 DDR1Q08345 913 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 PKN1Q16512 942 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 PHLDB2Q86SQ0 1253 aa16.99■□□□□ 0.31
SIN3B-201ENST00000248054 TTC26A0AVF1 554 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 ARHGEF37A1IGU5 675 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 LRRC53A6NM62 1247 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 FMR1Q06787 632 aaKnown RBP eCLIP16.98■□□□□ 0.31
SIN3B-201ENST00000248054 MAPK6Q16659 721 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 TOGARAM2Q6ZUX3 1019 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 PDZD4Q76G19 769 aaPredicted RBP16.98■□□□□ 0.31
SIN3B-201ENST00000248054 LRRN4CLQ8ND94 238 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 MXRA8Q9BRK3 442 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 MTFR1LQ9H019 292 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 ENC1O14682 589 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 MYO1EQ12965 1108 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 MESDQ14696 234 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 USP49Q70CQ1 688 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 CCDC117Q8IWD4 279 aaPredicted RBP16.98■□□□□ 0.31
SIN3B-201ENST00000248054 PSPC1Q8WXF1 523 aaKnown RBP16.98■□□□□ 0.31
SIN3B-201ENST00000248054 BCL9LQ86UU0 1499 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 EIF3DO15371 548 aaKnown RBP eCLIP16.98■□□□□ 0.31
SIN3B-201ENST00000248054 MOCS3O95396 460 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 PHKA2P46019 1235 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 TOB1P50616 345 aaPredicted RBP16.98■□□□□ 0.31
SIN3B-201ENST00000248054 PNMA8AQ86V59 439 aaPredicted RBP16.98■□□□□ 0.31
SIN3B-201ENST00000248054 JPH1Q9HDC5 661 aaPredicted RBP16.98■□□□□ 0.31
SIN3B-201ENST00000248054 CHUKO15111 745 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 ZMYND10O75800 440 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 TROVE2P10155 538 aaKnown RBP eCLIP16.98■□□□□ 0.31
SIN3B-201ENST00000248054 PHBP35232 272 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 VAMP7P51809 220 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 FKBP1CQ5VVH2 108 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 ADAMTS1Q9UHI8 967 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 SCINQ9Y6U3 715 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 PFASO15067 1338 aa16.98■□□□□ 0.31
SIN3B-201ENST00000248054 DENND3A2RUS2 1198 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 CCDC160A6NGH7 325 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 CYP27A1Q02318 531 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms