RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 RIOX2Q8IUF8 465 aa20.23■□□□□ 0.83
HOXC11-201ENST00000243082 DNERQ8NFT8 737 aa20.23■□□□□ 0.83
HOXC11-201ENST00000243082 TMEM174Q8WUU8 243 aa20.23■□□□□ 0.83
HOXC11-201ENST00000243082 CLMNQ96JQ2 1002 aa20.23■□□□□ 0.83
HOXC11-201ENST00000243082 ACCSQ96QU6 501 aa20.23■□□□□ 0.83
HOXC11-201ENST00000243082 SLC9A2Q9UBY0 812 aa20.23■□□□□ 0.83
HOXC11-201ENST00000243082 FBXL5Q9UKA1 691 aa20.23■□□□□ 0.83
HOXC11-201ENST00000243082 FHOD1Q9Y613 1164 aa20.23■□□□□ 0.83
HOXC11-201ENST00000243082 NCKAP1LP55160 1127 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 SP2Q02086 613 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 FSTL1Q12841 308 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 GNPTABQ3T906 1256 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 SWSAP1Q6NVH7 229 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 MOB2Q70IA6 237 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 SRGAP1Q7Z6B7 1085 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 ANKRD35Q8N283 1001 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 FAM133AQ8N9E0 248 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 PROCA1Q8NCQ7 364 aaPredicted RBP20.22■□□□□ 0.83
HOXC11-201ENST00000243082 OTUD5Q96G74 571 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 SRCAPQ6ZRS2 3230 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 A0A0G2JMZ2 1700 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 WDR81Q562E7 1941 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 TFRCP02786 760 aaKnown RBP20.22■□□□□ 0.83
HOXC11-201ENST00000243082 PSAPP07602 524 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 H2AFXP16104 143 aaPredicted RBP20.22■□□□□ 0.83
HOXC11-201ENST00000243082 MAGEA1P43355 309 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 PEX3P56589 373 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 ACTR2P61160 394 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 STXBP2Q15833 593 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 FAM102BQ5T8I3 360 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 ABHD15Q6UXT9 468 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 ATP6V0A1Q93050 837 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 CDCA5Q96FF9 252 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 GCNT4Q9P109 453 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 MYO6Q9UM54 1294 aa20.22■□□□□ 0.83
HOXC11-201ENST00000243082 MACROD2A1Z1Q3 448 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 TISP43B9A030 160 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 ENC1O14682 589 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 SLC16A4O15374 487 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 PJA2O43164 708 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 EXOC3O60645 756 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 FMO5P49326 533 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 PPP2R5AQ15172 486 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 ASIC2Q16515 512 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 OTUD6AQ7L8S5 288 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 TRAPPC11Q7Z392 1133 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 IRF2BP2Q7Z5L9 587 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 ERO1BQ86YB8 467 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 C12orf56Q8IXR9 622 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 CEP112Q8N8E3 955 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 SECISBP2LQ93073 1101 aaKnown RBP20.21■□□□□ 0.83
HOXC11-201ENST00000243082 FBXO40Q9UH90 709 aa20.21■□□□□ 0.83
HOXC11-201ENST00000243082 EIF3JO75822 258 aaKnown RBP20.2■□□□□ 0.83
HOXC11-201ENST00000243082 ATP1A1P05023 1023 aaKnown RBP20.2■□□□□ 0.83
HOXC11-201ENST00000243082 ICAM3P32942 547 aa20.2■□□□□ 0.83
HOXC11-201ENST00000243082 ARID5AQ03989 594 aa20.2■□□□□ 0.83
HOXC11-201ENST00000243082 KLHL30Q0D2K2 578 aa20.2■□□□□ 0.83
HOXC11-201ENST00000243082 PAPD7Q5XG87 772 aaKnown RBP20.2■□□□□ 0.83
HOXC11-201ENST00000243082 CCDC60Q8IWA6 550 aaPredicted RBP20.2■□□□□ 0.83
HOXC11-201ENST00000243082 ANKRD13AQ8IZ07 590 aa20.2■□□□□ 0.83
HOXC11-201ENST00000243082 L3MBTL3Q96JM7 780 aaPredicted RBP20.2■□□□□ 0.83
HOXC11-201ENST00000243082 SPATC1LQ9H0A9 340 aa20.2■□□□□ 0.83
HOXC11-201ENST00000243082 AJAP1Q9UKB5 411 aaPredicted RBP20.2■□□□□ 0.83
HOXC11-201ENST00000243082 DOCK5Q9H7D0 1870 aa20.2■□□□□ 0.82
HOXC11-201ENST00000243082 PFASO15067 1338 aa20.2■□□□□ 0.82
HOXC11-201ENST00000243082 CXCL11O14625 94 aa20.2■□□□□ 0.82
HOXC11-201ENST00000243082 SORBS3O60504 671 aa20.2■□□□□ 0.82
HOXC11-201ENST00000243082 DKC1O60832 514 aaKnown RBP eCLIP20.2■□□□□ 0.82
HOXC11-201ENST00000243082 SP4Q02446 784 aa20.2■□□□□ 0.82
HOXC11-201ENST00000243082 WHAMMP3Q1A5X7 153 aa20.2■□□□□ 0.82
HOXC11-201ENST00000243082 USP50Q70EL3 339 aaPredicted RBP20.2■□□□□ 0.82
HOXC11-201ENST00000243082 CEP170P1Q96L14 293 aa20.2■□□□□ 0.82
HOXC11-201ENST00000243082 SPAG5Q96R06 1193 aa20.2■□□□□ 0.82
HOXC11-201ENST00000243082 PCIF1Q9H4Z3 704 aa20.2■□□□□ 0.82
HOXC11-201ENST00000243082 HDAC6Q9UBN7 1215 aa20.2■□□□□ 0.82
HOXC11-201ENST00000243082 PUF60Q9UHX1 559 aaKnown RBP20.2■□□□□ 0.82
HOXC11-201ENST00000243082 SPDYE5A6NIY4 337 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 TRIM49P0CI25 452 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 TRIM49CP0CI26 452 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 ALDH5A1P51649 535 aaPredicted RBP20.19■□□□□ 0.82
HOXC11-201ENST00000243082 JAM2P57087 298 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 CHMP4BP1P59074 171 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 BFSP1Q12934 665 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 CBWD6Q4V339 395 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 CBWD3Q5JTY5 395 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 CBWD5Q5RIA9 395 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 TEX35Q5T0J7 233 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 RDH13Q8NBN7 331 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 GOLGA1Q92805 767 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 CBWD1Q9BRT8 395 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 EPC1Q9H2F5 836 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 MLXIPQ9HAP2 919 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 PDLIM7Q9NR12 457 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 NPTX2P47972 431 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 SLC18A3Q16572 532 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 DPY19L2Q6NUT2 758 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 GJB7Q6PEY0 223 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 SLC17A8Q8NDX2 589 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 TMEM161BQ8NDZ6 487 aa20.19■□□□□ 0.82
HOXC11-201ENST00000243082 ZC3H15Q8WU90 426 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms