RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 GRIN2DO15399 1336 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 ARID2Q68CP9 1835 aa14.58□□□□□ -0.08
SLIRP-201ENST00000238688 RBM47A0AV96 593 aaKnown RBP14.58□□□□□ -0.08
SLIRP-201ENST00000238688 SSBP05455 408 aaKnown RBP eCLIP14.58□□□□□ -0.08
SLIRP-201ENST00000238688 MYCLP12524 364 aaPredicted RBP14.58□□□□□ -0.08
SLIRP-201ENST00000238688 ATP1A3P13637 1013 aa14.58□□□□□ -0.08
SLIRP-201ENST00000238688 ZNF131P52739 623 aa14.58□□□□□ -0.08
SLIRP-201ENST00000238688 ITGB3BPQ13352 177 aaPredicted RBP14.58□□□□□ -0.08
SLIRP-201ENST00000238688 TCP11X2Q5H9J9 407 aa14.58□□□□□ -0.08
SLIRP-201ENST00000238688 SPECC1LQ69YQ0 1117 aa14.58□□□□□ -0.08
SLIRP-201ENST00000238688 IQSEC1Q6DN90 963 aa14.58□□□□□ -0.08
SLIRP-201ENST00000238688 TLK2Q86UE8 772 aa14.58□□□□□ -0.08
SLIRP-201ENST00000238688 CSGALNACT2Q8N6G5 542 aa14.58□□□□□ -0.08
SLIRP-201ENST00000238688 SLC43A3Q8NBI5 491 aa14.58□□□□□ -0.08
SLIRP-201ENST00000238688 DYDC2Q96IM9 177 aa14.58□□□□□ -0.08
SLIRP-201ENST00000238688 GLT1D1Q96MS3 346 aa14.58□□□□□ -0.08
SLIRP-201ENST00000238688 BHMT2Q9H2M3 363 aa14.58□□□□□ -0.08
SLIRP-201ENST00000238688 VTA1Q9NP79 307 aa14.58□□□□□ -0.08
SLIRP-201ENST00000238688 PCDHA10Q9Y5I2 948 aa14.58□□□□□ -0.08
SLIRP-201ENST00000238688 ARHGEF35A5YM69 484 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 ARVCFO00192 962 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 PSAPP07602 524 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 TPM1P09493 284 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 KCNA2P16389 499 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 GIT2Q14161 759 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 NEDD9Q14511 834 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 NR1I3Q14994 352 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 NFIL3Q16649 462 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 HERC4Q5GLZ8 1057 aaPredicted RBP14.57□□□□□ -0.08
SLIRP-201ENST00000238688 RINT1Q6NUQ1 792 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 C1orf186Q6ZWK4 172 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 OTUD6AQ7L8S5 288 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 DYMQ7RTS9 669 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 TPH2Q8IWU9 490 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 FAM126BQ8IXS8 530 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 SMYD4Q8IYR2 804 aaPredicted RBP14.57□□□□□ -0.08
SLIRP-201ENST00000238688 GOLGA5Q8TBA6 731 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 GJA10Q969M2 543 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 C17orf75Q9HAS0 396 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 PARVGQ9HBI0 331 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 SPC25Q9HBM1 224 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 JPH1Q9HDC5 661 aaPredicted RBP14.57□□□□□ -0.08
SLIRP-201ENST00000238688 MTMR10Q9NXD2 777 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 CGNQ9P2M7 1197 aaKnown RBP14.57□□□□□ -0.08
SLIRP-201ENST00000238688 Q9Y3F1 56 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 PCDHA2Q9Y5H9 948 aa14.57□□□□□ -0.08
SLIRP-201ENST00000238688 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.57□□□□□ -0.086e-18■□□□□ 8
SLIRP-201ENST00000238688 A0A1W2PQC6 194 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 KCNJ18B7U540 433 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 DYNC1LI2O43237 492 aaPredicted RBP14.56□□□□□ -0.08
SLIRP-201ENST00000238688 CD4P01730 458 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 SFPQP23246 707 aaKnown RBP eCLIP14.56□□□□□ -0.08
SLIRP-201ENST00000238688 SNRPFP62306 86 aaKnown RBP14.56□□□□□ -0.08
SLIRP-201ENST00000238688 FKBP3Q00688 224 aaKnown RBP14.56□□□□□ -0.08
SLIRP-201ENST00000238688 CYP4A11Q02928 519 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 PPP2R3AQ06190 1150 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 KCNJ12Q14500 433 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 DUSP28Q4G0W2 176 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 ARSHQ5FYA8 562 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 CXCL17Q6UXB2 119 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 APTXQ7Z2E3 356 aaKnown RBP14.56□□□□□ -0.08
SLIRP-201ENST00000238688 CCDC186Q7Z3E2 898 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 DEFB123Q8N688 67 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 RETREG2Q8NC44 543 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 TMEM174Q8WUU8 243 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 CCDC51Q96ER9 411 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 DRC1Q96MC2 740 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 RTN4Q9NQC3 1192 aaKnown RBP14.56□□□□□ -0.08
SLIRP-201ENST00000238688 SAMSN1Q9NSI8 373 aaKnown RBP14.56□□□□□ -0.08
SLIRP-201ENST00000238688 TMEM39AQ9NV64 488 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 RGL1Q9NZL6 768 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 SLC9A2Q9UBY0 812 aa14.56□□□□□ -0.08
SLIRP-201ENST00000238688 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.56□□□□□ -0.08
SLIRP-201ENST00000238688 TRIP12Q14669 1992 aaPredicted RBP14.55□□□□□ -0.08
SLIRP-201ENST00000238688 A0A0U1RQG5 324 aaPredicted RBP14.55□□□□□ -0.08
SLIRP-201ENST00000238688 DCDC2CA8MYV0 355 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 PDXKO00764 312 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 CCP110O43303 1012 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 CHMP2AO43633 222 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 FAM13AO94988 1023 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 RAG1P15918 1043 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 RPL13P26373 211 aaKnown RBP14.55□□□□□ -0.08
SLIRP-201ENST00000238688 CLCN1P35523 988 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 DNM2P50570 870 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 MARSP56192 900 aaKnown RBP14.55□□□□□ -0.08
SLIRP-201ENST00000238688 MYBPC2Q14324 1141 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 HSP90AA2PQ14568 343 aaPredicted RBP14.55□□□□□ -0.08
SLIRP-201ENST00000238688 KRT31Q15323 416 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 FSCN1Q16658 493 aaKnown RBP14.55□□□□□ -0.08
SLIRP-201ENST00000238688 ZCWPW2Q504Y3 356 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 MIS18BP1Q6P0N0 1132 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 EPM2AIP1Q7L775 607 aaPredicted RBP14.55□□□□□ -0.08
SLIRP-201ENST00000238688 LRRC8AQ8IWT6 810 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 ZC3H3Q8IXZ2 948 aaKnown RBP14.55□□□□□ -0.08
SLIRP-201ENST00000238688 SPC24Q8NBT2 197 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 KCNN1Q92952 543 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 CCDC43Q96MW1 224 aaKnown RBP14.55□□□□□ -0.08
SLIRP-201ENST00000238688 REEP2Q9BRK0 252 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 ST6GALNAC4Q9H4F1 302 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 SLC39A2Q9NP94 309 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms