RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 THNSL1Q8IYQ7 743 aa14.08□□□□□ -0.15
NEK9-201ENST00000238616 TEX9Q8N6V9 391 aa14.08□□□□□ -0.15
NEK9-201ENST00000238616 CCNYL1Q8N7R7 359 aa14.08□□□□□ -0.15
NEK9-201ENST00000238616 BABAM1Q9NWV8 329 aa14.08□□□□□ -0.15
NEK9-201ENST00000238616 ANAPC7Q9UJX3 599 aa14.08□□□□□ -0.15
NEK9-201ENST00000238616 GYG2O15488 501 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 SLFN14P0C7P3 912 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 DR1Q01658 176 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 DHX9Q08211 1270 aaKnown RBP14.08□□□□□ -0.16
NEK9-201ENST00000238616 HS6ST3Q8IZP7 471 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 PPARGC1AQ9UBK2 798 aaKnown RBP14.08□□□□□ -0.16
NEK9-201ENST00000238616 KIAA0586Q9BVV6 1533 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 ZBTB7BO15156 539 aaPredicted RBP14.08□□□□□ -0.16
NEK9-201ENST00000238616 NBNO60934 754 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 ABCD1P33897 745 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 CUL1Q13616 776 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 FAM81BQ96LP2 452 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 TRIM54Q9BYV2 358 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.08□□□□□ -0.16
NEK9-201ENST00000238616 ARHGEF10O15013 1369 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 UGGT2Q9NYU1 1516 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 OCA2Q04671 838 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 SCRN1Q12765 414 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 CCDC142Q17RM4 750 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 GLYCTKQ8IVS8 523 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 MTBPQ96DY7 904 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 SNX5Q9Y5X3 404 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 PGRMC1O00264 195 aaKnown RBP14.08□□□□□ -0.16
NEK9-201ENST00000238616 PHKA1P46020 1223 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 ZNF496Q96IT1 587 aaPredicted RBP14.08□□□□□ -0.16
NEK9-201ENST00000238616 SOX11P35716 441 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 MRPS25P82663 173 aaKnown RBP14.08□□□□□ -0.16
NEK9-201ENST00000238616 WDR11Q9BZH6 1224 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 PCDHGB4Q9UN71 923 aa14.08□□□□□ -0.16
NEK9-201ENST00000238616 SKIP12755 728 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 RC3H1Q5TC82 1133 aaKnown RBP14.07□□□□□ -0.16
NEK9-201ENST00000238616 SPATA1Q5VX52 437 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 ANKRD49Q8WVL7 239 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 SERPINB13Q9UIV8 391 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 E9PMD0 336 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 KRT8P05787 483 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 HOXD10P28358 340 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 MTMR1Q13613 665 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 PDIK1LQ8N165 341 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 GPR101Q96P66 508 aaPredicted RBP14.07□□□□□ -0.16
NEK9-201ENST00000238616 MAGEB5Q9BZ81 275 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 PI4KBQ9UBF8 816 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 PDE4DIPQ5VU43 2346 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 CYFIP1Q7L576 1253 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 ZNF518AQ6AHZ1 1483 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 SEC24DO94855 1032 aaPredicted RBP14.07□□□□□ -0.16
NEK9-201ENST00000238616 FOSP01100 380 aaPredicted RBP14.07□□□□□ -0.16
NEK9-201ENST00000238616 SYTL3Q4VX76 610 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 FAM196AQ6ZSG2 479 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 ZNF274Q96GC6 653 aaPredicted RBP14.07□□□□□ -0.16
NEK9-201ENST00000238616 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.07□□□□□ -0.162e-7■■■□□ 15.2
NEK9-201ENST00000238616 NHEJ1Q9H9Q4 299 aaPredicted RBP14.07□□□□□ -0.16
NEK9-201ENST00000238616 SAYSD1Q9NPB0 183 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 ADCY3O60266 1144 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 MLXIPLQ9NP71 852 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 SPTLC3Q9NUV7 552 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 CARMIL3Q8ND23 1372 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 RPRD2Q5VT52 1461 aaKnown RBP14.07□□□□□ -0.16
NEK9-201ENST00000238616 H0Y3Z8 333 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 KCNJ6P48051 423 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 MXI1P50539 228 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 SYCP2LQ5T4T6 812 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 EPM2AIP1Q7L775 607 aaPredicted RBP14.07□□□□□ -0.16
NEK9-201ENST00000238616 APOBEC2Q9Y235 224 aaKnown RBP14.07□□□□□ -0.16
NEK9-201ENST00000238616 ABCC4O15439 1325 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 PCYT1AP49585 367 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 SLC16A1P53985 500 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 PTH1RQ03431 593 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 HEMGNQ9BXL5 484 aa14.07□□□□□ -0.16
NEK9-201ENST00000238616 ATP10DQ9P241 1426 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 COPEO14579 308 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 SERPINB2P05120 415 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 PLA2G4BP0C869 781 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 KRT17Q04695 432 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 FASTKD1Q53R41 847 aaKnown RBP14.06□□□□□ -0.16
NEK9-201ENST00000238616 OR9Q1Q8NGQ5 310 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 ZHX2Q9Y6X8 837 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 COL17A1Q9UMD9 1497 aaPredicted RBP14.06□□□□□ -0.16
NEK9-201ENST00000238616 SEMA3EO15041 775 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 TLR2O60603 784 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 LRRC8EQ6NSJ5 796 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 CYP4F11Q9HBI6 524 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 RNF103-CHMP3A0A140T963 221 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 SOWAHDA6NJG2 315 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 C21orf2O43822 256 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 SPAG7O75391 227 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 ALDH1A1P00352 501 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 USP17L8P0C7I0 530 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 TRIM60Q495X7 471 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 PPP1R13BQ96KQ4 1090 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 A0A087WWV3 80 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 KRT4P19013 534 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 PLCG1P19174 1290 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 GRIN2AQ12879 1464 aa14.06□□□□□ -0.16
NEK9-201ENST00000238616 GTF2H3Q13889 308 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms