RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 SF3A1Q15459 793 aaKnown RBP15.34■□□□□ 0.05
VEGFA-201ENST00000230480 XKR9Q5GH70 373 aa15.34■□□□□ 0.05
VEGFA-201ENST00000230480 USP49Q70CQ1 688 aa15.34■□□□□ 0.05
VEGFA-201ENST00000230480 BRAPQ7Z569 592 aa15.34■□□□□ 0.05
VEGFA-201ENST00000230480 NEK9Q8TD19 979 aa15.34■□□□□ 0.05
VEGFA-201ENST00000230480 SP7Q8TDD2 431 aaPredicted RBP15.34■□□□□ 0.05
VEGFA-201ENST00000230480 ASAP3Q8TDY4 903 aa15.34■□□□□ 0.05
VEGFA-201ENST00000230480 PRPF31Q8WWY3 499 aaKnown RBP15.34■□□□□ 0.05
VEGFA-201ENST00000230480 FDXACB1Q9BRP7 624 aaPredicted RBP15.34■□□□□ 0.05
VEGFA-201ENST00000230480 TSPYL2Q9H2G4 693 aaPredicted RBP15.34■□□□□ 0.05
VEGFA-201ENST00000230480 ZNF576Q9H609 170 aa15.34■□□□□ 0.05
VEGFA-201ENST00000230480 POLD4Q9HCU8 107 aa15.34■□□□□ 0.05
VEGFA-201ENST00000230480 SUCLA2Q9P2R7 463 aaPredicted RBP15.34■□□□□ 0.05
VEGFA-201ENST00000230480 GINS2Q9Y248 185 aa15.34■□□□□ 0.05
VEGFA-201ENST00000230480 BRWD1Q9NSI6 2320 aa15.33■□□□□ 0.05
VEGFA-201ENST00000230480 REV3LO60673 3130 aa15.33■□□□□ 0.05
VEGFA-201ENST00000230480 C9IYK1 514 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 LAD1O00515 517 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 EIF4BP23588 611 aaKnown RBP15.33■□□□□ 0.04
VEGFA-201ENST00000230480 FAM189BP81408 668 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 GRB10Q13322 594 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 EMC2Q15006 297 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 HYIQ5T013 277 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 FAM117BQ6P1L5 589 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 USP38Q8NB14 1042 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 BSNDQ8WZ55 320 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 APBB2Q92870 758 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 ZNF689Q96CS4 500 aaPredicted RBP15.33■□□□□ 0.04
VEGFA-201ENST00000230480 USP28Q96RU2 1077 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 CDX2Q99626 313 aaPredicted RBP15.33■□□□□ 0.04
VEGFA-201ENST00000230480 GPRC5CQ9NQ84 441 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 RNF19AQ9NV58 838 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 LRWD1Q9UFC0 647 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 DBR1Q9UK59 544 aaKnown RBP15.33■□□□□ 0.04
VEGFA-201ENST00000230480 AKT3Q9Y243 479 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 KIAA1671Q9BY89 1806 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 TCHHQ07283 1943 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 ATG2AQ2TAZ0 1938 aa15.33■□□□□ 0.04
VEGFA-201ENST00000230480 NLRC5Q86WI3 1866 aa15.32■□□□□ 0.04
VEGFA-201ENST00000230480 E9PMD0 336 aa15.32■□□□□ 0.04
VEGFA-201ENST00000230480 RFXAPO00287 272 aa15.32■□□□□ 0.04
VEGFA-201ENST00000230480 LPXNO60711 386 aa15.32■□□□□ 0.04
VEGFA-201ENST00000230480 RPS6KA5O75582 802 aa15.32■□□□□ 0.04
VEGFA-201ENST00000230480 PDCP20941 246 aa15.32■□□□□ 0.04
VEGFA-201ENST00000230480 GLRA2P23416 452 aa15.32■□□□□ 0.04
VEGFA-201ENST00000230480 RFC5P40937 340 aa15.32■□□□□ 0.04
VEGFA-201ENST00000230480 GATMP50440 423 aa15.32■□□□□ 0.04
VEGFA-201ENST00000230480 ARL6IP4Q66PJ3 421 aaKnown RBP15.32■□□□□ 0.04
VEGFA-201ENST00000230480 MYOCDQ8IZQ8 938 aa15.32■□□□□ 0.04
VEGFA-201ENST00000230480 SPRYD3Q8NCJ5 442 aa15.32■□□□□ 0.04
VEGFA-201ENST00000230480 CHAMP1Q96JM3 812 aa15.32■□□□□ 0.04
VEGFA-201ENST00000230480 MTIF3Q9H2K0 278 aaKnown RBP15.32■□□□□ 0.04
VEGFA-201ENST00000230480 PPME1Q9Y570 386 aa15.32■□□□□ 0.04
VEGFA-201ENST00000230480 TMEM265A0A087WTH1 108 aa15.31■□□□□ 0.04
VEGFA-201ENST00000230480 LINC01553A4QN01 128 aa15.31■□□□□ 0.04
VEGFA-201ENST00000230480 DKC1O60832 514 aaKnown RBP eCLIP15.31■□□□□ 0.04
VEGFA-201ENST00000230480 EFCAB14O75071 495 aa15.31■□□□□ 0.04
VEGFA-201ENST00000230480 LAMTOR4Q0VGL1 99 aa15.31■□□□□ 0.04
VEGFA-201ENST00000230480 RAB30Q15771 203 aa15.31■□□□□ 0.04
VEGFA-201ENST00000230480 DTHD1Q6ZMT9 781 aa15.31■□□□□ 0.04
VEGFA-201ENST00000230480 OTUD6AQ7L8S5 288 aa15.31■□□□□ 0.04
VEGFA-201ENST00000230480 HSCBQ8IWL3 235 aa15.31■□□□□ 0.04
VEGFA-201ENST00000230480 DAW1Q8N136 415 aa15.31■□□□□ 0.04
VEGFA-201ENST00000230480 RAD9AQ99638 391 aa15.31■□□□□ 0.04
VEGFA-201ENST00000230480 RGS18Q9NS28 235 aa15.31■□□□□ 0.04
VEGFA-201ENST00000230480 FBXO2Q9UK22 296 aaPredicted RBP15.31■□□□□ 0.04
VEGFA-201ENST00000230480 KIAA1024Q9UPX6 916 aa15.31■□□□□ 0.04
VEGFA-201ENST00000230480 VWA3AA6NCI4 1184 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 EDN1P05305 212 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 ATF7P17544 494 aaPredicted RBP15.3■□□□□ 0.04
VEGFA-201ENST00000230480 MUTP22033 750 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 TMOD1P28289 359 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 HOXA11P31270 313 aaPredicted RBP15.3■□□□□ 0.04
VEGFA-201ENST00000230480 CCT6AP40227 531 aaKnown RBP15.3■□□□□ 0.04
VEGFA-201ENST00000230480 KCNJ6P48051 423 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 NFX1Q12986 1120 aaKnown RBP15.3■□□□□ 0.04
VEGFA-201ENST00000230480 MAPK7Q13164 816 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 PAK2Q13177 524 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 CAPSQ13938 189 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 AMHR2Q16671 573 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 TMEM119Q4V9L6 283 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 IFNLR1Q8IU57 520 aaPredicted RBP15.3■□□□□ 0.04
VEGFA-201ENST00000230480 RHPN2Q8IUC4 686 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 MYLIPQ8WY64 445 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 NACC1Q96RE7 527 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 MAP7D2Q96T17 732 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 ADAM2Q99965 735 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 BLOC1S4Q9NUP1 217 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 DDX19AQ9NUU7 478 aaKnown RBP15.3■□□□□ 0.04
VEGFA-201ENST00000230480 COL4A3BPQ9Y5P4 624 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 EYSQ5T1H1 3165 aa15.3■□□□□ 0.04
VEGFA-201ENST00000230480 PRUNE2Q8WUY3 3088 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 TTLL13PA6NNM8 815 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 TLL1O43897 1013 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 DGAT1O75907 488 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 DGKIO75912 1065 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 UPP2O95045 317 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 AMHP03971 560 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 CYP11B2P19099 503 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 DEKP35659 375 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms