RNA–Protein interactions for RNA: ENST00000229729.10

SLC44A4-202, Transcript of solute carrier family 44 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC44A4, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4-202ENST00000229729 SYT15Q9BQS2 421 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 LRMDAQ9H2I8 198 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 GRHL1Q9NZI5 618 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 SHANK3Q9BYB0 1731 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 TMEM120BA0PK00 339 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 UPP2O95045 317 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 PDHA1P08559 390 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 ATP5DP30049 168 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 PEX5P50542 639 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 TUBP50607 506 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 COASYQ13057 564 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 PRPF4BQ13523 1007 aaKnown RBP13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 ACVR2BQ13705 512 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 FAM26FQ5R3K3 315 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 ENDOVQ8N8Q3 282 aaKnown RBP13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 MGARPQ8TDB4 240 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 GLG1Q92896 1179 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 TRIM4Q9C037 500 aa13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 DBR1Q9UK59 544 aaKnown RBP13.72□□□□□ -0.21
SLC44A4-202ENST00000229729 A0A1B0GUL6 1792 aa13.71□□□□□ -0.21
SLC44A4-202ENST00000229729 DDX3YO15523 660 aaKnown RBP13.71□□□□□ -0.21
SLC44A4-202ENST00000229729 RARGP13631 454 aa13.71□□□□□ -0.21
SLC44A4-202ENST00000229729 UCHL3P15374 230 aa13.71□□□□□ -0.21
SLC44A4-202ENST00000229729 ATF3P18847 181 aa13.71□□□□□ -0.21
SLC44A4-202ENST00000229729 TMEM154Q6P9G4 183 aa13.71□□□□□ -0.21
SLC44A4-202ENST00000229729 PNMA1Q8ND90 353 aa13.71□□□□□ -0.21
SLC44A4-202ENST00000229729 CABLES1Q8TDN4 633 aa13.71□□□□□ -0.21
SLC44A4-202ENST00000229729 ASAP3Q8TDY4 903 aa13.71□□□□□ -0.21
SLC44A4-202ENST00000229729 GRAMD1AQ96CP6 724 aa13.71□□□□□ -0.21
SLC44A4-202ENST00000229729 COL1A1P02452 1464 aaPredicted RBP13.71□□□□□ -0.21
SLC44A4-202ENST00000229729 RNF8O76064 485 aa13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 SP100P23497 879 aaPredicted RBP13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 TXKP42681 527 aa13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 FXR2P51116 673 aaKnown RBP eCLIP13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 KCNH2Q12809 1159 aa13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 CUL3Q13618 768 aa13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 TMEM266Q2M3C6 531 aa13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 TBC1D25Q3MII6 688 aa13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 ZC3H12AQ5D1E8 599 aaKnown RBP13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 PPP1R15BQ5SWA1 713 aa13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 DNAAF5Q86Y56 855 aa13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 UHMK1Q8TAS1 419 aaKnown RBP13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 ZCRB1Q8TBF4 217 aaKnown RBP13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 SH3TC2Q8TF17 1288 aa13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 EZH1Q92800 747 aaPredicted RBP13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 DDX17Q92841 729 aaKnown RBP13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 BICD1Q96G01 975 aa13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 GORASP1Q9BQQ3 440 aa13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 RAB34Q9BZG1 259 aa13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 KANSL2Q9H9L4 492 aa13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 ERVK-5Q9HDB9 667 aa13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 USP40Q9NVE5 1235 aa13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 ZMYND8Q9ULU4 1186 aaPredicted RBP13.71□□□□□ -0.22
SLC44A4-202ENST00000229729 CACNA1SQ13698 1873 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 PODXLO00592 558 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 HSPA6P17066 643 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 FGFR4P22455 802 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 DCAF12L1Q5VU92 463 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 INTS8Q75QN2 995 aaKnown RBP13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 DGKHQ86XP1 1220 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 DNAJC9Q8WXX5 260 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 ARHGEF2Q92974 986 aaKnown RBP13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 TRAPPC9Q96Q05 1148 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 TMEM237Q96Q45 408 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 SH3BP1Q9Y3L3 701 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 NCANO14594 1321 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 LAMB1P07942 1786 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 PHF2O75151 1096 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 ACTN1P12814 892 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 CHRNA3P32297 505 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 WASHC2DQ5SRD0 308 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 DPY19L2P1Q6NXN4 242 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 IRGCQ6NXR0 463 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 VSTM1Q6UX27 236 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 ARHGAP22Q7Z5H3 698 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 ZC3H3Q8IXZ2 948 aaKnown RBP13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 B4GALNT2Q8NHY0 566 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 INPP5DQ92835 1189 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 NLRP3Q96P20 1036 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 NUDCD1Q96RS6 583 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 RPS6KC1Q96S38 1066 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 TAOK3Q9H2K8 898 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 PIDD1Q9HB75 910 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 MAD2L2Q9UI95 211 aa13.7□□□□□ -0.22
SLC44A4-202ENST00000229729 PITPNM2Q9BZ72 1349 aa13.69□□□□□ -0.22
SLC44A4-202ENST00000229729 MAP3K13O43283 966 aa13.69□□□□□ -0.22
SLC44A4-202ENST00000229729 GFPT2O94808 682 aa13.69□□□□□ -0.22
SLC44A4-202ENST00000229729 KRT13P13646 458 aa13.69□□□□□ -0.22
SLC44A4-202ENST00000229729 GNA11P29992 359 aa13.69□□□□□ -0.22
SLC44A4-202ENST00000229729 COPB2P35606 906 aa13.69□□□□□ -0.22
SLC44A4-202ENST00000229729 PTGIRP43119 386 aa13.69□□□□□ -0.22
SLC44A4-202ENST00000229729 RPL21P46778 160 aaKnown RBP13.69□□□□□ -0.22
SLC44A4-202ENST00000229729 NAPAP54920 295 aa13.69□□□□□ -0.22
SLC44A4-202ENST00000229729 MGAT5Q09328 741 aa13.69□□□□□ -0.22
SLC44A4-202ENST00000229729 DYNC1I2Q13409 638 aaKnown RBP13.69□□□□□ -0.22
SLC44A4-202ENST00000229729 SETDB1Q15047 1291 aa13.69□□□□□ -0.22
SLC44A4-202ENST00000229729 MTFR1Q15390 333 aa13.69□□□□□ -0.22
SLC44A4-202ENST00000229729 SOGA3Q5TF21 947 aa13.69□□□□□ -0.22
SLC44A4-202ENST00000229729 KRT79Q5XKE5 535 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms