RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 GRM6O15303 877 aa15.94■□□□□ 0.14
GPN3-201ENST00000228827 NEMFO60524 1076 aa15.94■□□□□ 0.14
GPN3-201ENST00000228827 DKC1O60832 514 aaKnown RBP eCLIP15.94■□□□□ 0.14
GPN3-201ENST00000228827 MAFO75444 373 aaPredicted RBP15.94■□□□□ 0.14
GPN3-201ENST00000228827 RB1P06400 928 aa15.94■□□□□ 0.14
GPN3-201ENST00000228827 DARSP14868 501 aaKnown RBP15.94■□□□□ 0.14
GPN3-201ENST00000228827 SPIRE1Q08AE8 756 aa15.94■□□□□ 0.14
GPN3-201ENST00000228827 DSC3Q14574 896 aa15.94■□□□□ 0.14
GPN3-201ENST00000228827 AAK1Q2M2I8 961 aa15.94■□□□□ 0.14
GPN3-201ENST00000228827 RHPN2Q8IUC4 686 aa15.94■□□□□ 0.14
GPN3-201ENST00000228827 CEP170P1Q96L14 293 aa15.94■□□□□ 0.14
GPN3-201ENST00000228827 LLPHQ9BRT6 129 aaKnown RBP15.94■□□□□ 0.14
GPN3-201ENST00000228827 SUCLA2Q9P2R7 463 aaPredicted RBP15.94■□□□□ 0.14
GPN3-201ENST00000228827 SPTBN5Q9NRC6 3674 aaKnown RBP15.93■□□□□ 0.14
GPN3-201ENST00000228827 A0A087WZ62 844 aa15.93■□□□□ 0.14
GPN3-201ENST00000228827 FGFR1P11362 822 aa15.93■□□□□ 0.14
GPN3-201ENST00000228827 ZSCAN20P17040 1043 aaPredicted RBP15.93■□□□□ 0.14
GPN3-201ENST00000228827 TXKP42681 527 aa15.93■□□□□ 0.14
GPN3-201ENST00000228827 RBM25P49756 843 aaKnown RBP15.93■□□□□ 0.14
GPN3-201ENST00000228827 TIGD5Q53EQ6 642 aa15.93■□□□□ 0.14
GPN3-201ENST00000228827 TCEAL5Q5H9L2 206 aa15.93■□□□□ 0.14
GPN3-201ENST00000228827 SPOUT1Q5T280 376 aaKnown RBP15.93■□□□□ 0.14
GPN3-201ENST00000228827 KSR1Q8IVT5 923 aa15.93■□□□□ 0.14
GPN3-201ENST00000228827 TPH2Q8IWU9 490 aa15.93■□□□□ 0.14
GPN3-201ENST00000228827 ZNF710Q8N1W2 664 aa15.93■□□□□ 0.14
GPN3-201ENST00000228827 FAM184AQ8NB25 1140 aa15.93■□□□□ 0.14
GPN3-201ENST00000228827 FDXACB1Q9BRP7 624 aaPredicted RBP15.93■□□□□ 0.14
GPN3-201ENST00000228827 GCOM2Q9BZD3 368 aaPredicted RBP15.93■□□□□ 0.14
GPN3-201ENST00000228827 ATP6V0A4Q9HBG4 840 aa15.93■□□□□ 0.14
GPN3-201ENST00000228827 ALG13Q9NP73 1137 aaKnown RBP15.93■□□□□ 0.14
GPN3-201ENST00000228827 SH2B1Q9NRF2 756 aaPredicted RBP15.93■□□□□ 0.14
GPN3-201ENST00000228827 PCDHA12Q9UN75 941 aa15.93■□□□□ 0.14
GPN3-201ENST00000228827 VCANP13611 3396 aa15.93■□□□□ 0.14
GPN3-201ENST00000228827 XIRP2A4UGR9 3374 aa15.92■□□□□ 0.14
GPN3-201ENST00000228827 ZBTB39O15060 712 aa15.92■□□□□ 0.14
GPN3-201ENST00000228827 BMP1P13497 986 aa15.92■□□□□ 0.14
GPN3-201ENST00000228827 YWHABP31946 246 aaKnown RBP15.92■□□□□ 0.14
GPN3-201ENST00000228827 MCM7P33993 719 aa15.92■□□□□ 0.14
GPN3-201ENST00000228827 POLGP54098 1239 aaPredicted RBP15.92■□□□□ 0.14
GPN3-201ENST00000228827 C4orf19Q8IY42 314 aa15.92■□□□□ 0.14
GPN3-201ENST00000228827 RNF169Q8NCN4 708 aa15.92■□□□□ 0.14
GPN3-201ENST00000228827 SLC7A3Q8WY07 619 aa15.92■□□□□ 0.14
GPN3-201ENST00000228827 NLRP4Q96MN2 994 aa15.92■□□□□ 0.14
GPN3-201ENST00000228827 NECAB3Q96P71 396 aaPredicted RBP15.92■□□□□ 0.14
GPN3-201ENST00000228827 UHRF1Q96T88 793 aaPredicted RBP15.92■□□□□ 0.14
GPN3-201ENST00000228827 EIF2AK1Q9BQI3 630 aaKnown RBP15.92■□□□□ 0.14
GPN3-201ENST00000228827 RNF216Q9NWF9 866 aaPredicted RBP15.92■□□□□ 0.14
GPN3-201ENST00000228827 TMEM161AQ9NX61 479 aa15.92■□□□□ 0.14
GPN3-201ENST00000228827 HCSTQ9UBK5 93 aa15.92■□□□□ 0.14
GPN3-201ENST00000228827 FAM189BP81408 668 aa15.91■□□□□ 0.14
GPN3-201ENST00000228827 HMGN5P82970 282 aaKnown RBP15.91■□□□□ 0.14
GPN3-201ENST00000228827 FAM43BQ6ZT52 329 aaPredicted RBP15.91■□□□□ 0.14
GPN3-201ENST00000228827 EP400NLQ6ZTU2 488 aa15.91■□□□□ 0.14
GPN3-201ENST00000228827 TMEM143Q96AN5 459 aa15.91■□□□□ 0.14
GPN3-201ENST00000228827 JPH2Q9BR39 696 aaPredicted RBP15.91■□□□□ 0.14
GPN3-201ENST00000228827 PLVAPQ9BX97 442 aa15.91■□□□□ 0.14
GPN3-201ENST00000228827 TMEM60Q9H2L4 133 aa15.91■□□□□ 0.14
GPN3-201ENST00000228827 NSUN3Q9H649 340 aaKnown RBP15.91■□□□□ 0.14
GPN3-201ENST00000228827 ZSWIM4Q9H7M6 989 aa15.91■□□□□ 0.14
GPN3-201ENST00000228827 UBE2ZQ9H832 354 aaPredicted RBP15.91■□□□□ 0.14
GPN3-201ENST00000228827 TTC12Q9H892 705 aaPredicted RBP15.91■□□□□ 0.14
GPN3-201ENST00000228827 PRRC2BQ5JSZ5 2229 aaKnown RBP15.91■□□□□ 0.14
GPN3-201ENST00000228827 SLITRK3O94933 977 aa15.91■□□□□ 0.14
GPN3-201ENST00000228827 KCNA5P22460 613 aa15.91■□□□□ 0.14
GPN3-201ENST00000228827 CDC42EP1Q00587 391 aa15.91■□□□□ 0.14
GPN3-201ENST00000228827 GNL2Q13823 731 aaKnown RBP15.91■□□□□ 0.14
GPN3-201ENST00000228827 RABEP1Q15276 862 aa15.91■□□□□ 0.14
GPN3-201ENST00000228827 XKR9Q5GH70 373 aa15.91■□□□□ 0.14
GPN3-201ENST00000228827 OTUD6AQ7L8S5 288 aa15.91■□□□□ 0.14
GPN3-201ENST00000228827 KLHL23Q8NBE8 558 aa15.91■□□□□ 0.14
GPN3-201ENST00000228827 MTMR9Q96QG7 549 aa15.91■□□□□ 0.14
GPN3-201ENST00000228827 ELAC1Q9H777 363 aaKnown RBP15.91■□□□□ 0.14
GPN3-201ENST00000228827 PLAGL2Q9UPG8 496 aa15.91■□□□□ 0.14
GPN3-201ENST00000228827 TNFRSF10AO00220 468 aa15.9■□□□□ 0.14
GPN3-201ENST00000228827 ITGB1P05556 798 aa15.9■□□□□ 0.14
GPN3-201ENST00000228827 SFPQP23246 707 aaKnown RBP eCLIP15.9■□□□□ 0.14
GPN3-201ENST00000228827 EMC2Q15006 297 aa15.9■□□□□ 0.14
GPN3-201ENST00000228827 ZNF174Q15697 407 aa15.9■□□□□ 0.14
GPN3-201ENST00000228827 ZNF410Q86VK4 478 aa15.9■□□□□ 0.14
GPN3-201ENST00000228827 ECHDC2Q86YB7 292 aa15.9■□□□□ 0.14
GPN3-201ENST00000228827 FBXO18Q8NFZ0 1043 aa15.9■□□□□ 0.14
GPN3-201ENST00000228827 P2RX5Q93086 422 aa15.9■□□□□ 0.14
GPN3-201ENST00000228827 LMAN2LQ9H0V9 348 aa15.9■□□□□ 0.14
GPN3-201ENST00000228827 DHX33Q9H6R0 707 aaKnown RBP15.9■□□□□ 0.14
GPN3-201ENST00000228827 TYW1Q9NV66 732 aaKnown RBP15.9■□□□□ 0.14
GPN3-201ENST00000228827 COL4A3BPQ9Y5P4 624 aa15.9■□□□□ 0.14
GPN3-201ENST00000228827 MYO9BQ13459 2157 aa15.89■□□□□ 0.13
GPN3-201ENST00000228827 A0A087WWV3 80 aa15.89■□□□□ 0.13
GPN3-201ENST00000228827 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.89■□□□□ 0.13
GPN3-201ENST00000228827 POTEMA6NI47 508 aa15.89■□□□□ 0.13
GPN3-201ENST00000228827 ST18O60284 1047 aa15.89■□□□□ 0.13
GPN3-201ENST00000228827 DNAJB1P25685 340 aa15.89■□□□□ 0.13
GPN3-201ENST00000228827 RFC5P40937 340 aa15.89■□□□□ 0.13
GPN3-201ENST00000228827 CATSPER4Q7RTX7 472 aa15.89■□□□□ 0.13
GPN3-201ENST00000228827 SPPL3Q8TCT6 385 aa15.89■□□□□ 0.13
GPN3-201ENST00000228827 PRPF31Q8WWY3 499 aaKnown RBP15.89■□□□□ 0.13
GPN3-201ENST00000228827 CASD1Q96PB1 797 aa15.89■□□□□ 0.13
GPN3-201ENST00000228827 HSD17B14Q9BPX1 270 aa15.89■□□□□ 0.13
GPN3-201ENST00000228827 INO80BQ9C086 356 aaPredicted RBP15.89■□□□□ 0.13
GPN3-201ENST00000228827 FOXP1Q9H334 677 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms