RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 KATNBL1Q9H079 304 aa18.47■□□□□ 0.55
TVP23C-201ENST00000225576 XPNPEP1Q9NQW7 623 aa18.47■□□□□ 0.55
TVP23C-201ENST00000225576 CGNQ9P2M7 1197 aaKnown RBP18.47■□□□□ 0.55
TVP23C-201ENST00000225576 DOCK5Q9H7D0 1870 aa18.47■□□□□ 0.55
TVP23C-201ENST00000225576 EMSYQ7Z589 1322 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 PLXNB2O15031 1838 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 GYPCP04921 128 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 ADKP55263 362 aaKnown RBP18.46■□□□□ 0.55
TVP23C-201ENST00000225576 SNRPFP62306 86 aaKnown RBP18.46■□□□□ 0.55
TVP23C-201ENST00000225576 DMP1Q13316 513 aaPredicted RBP18.46■□□□□ 0.55
TVP23C-201ENST00000225576 LAMC2Q13753 1193 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 MYBPC2Q14324 1141 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 NOLC1Q14978 699 aaKnown RBP eCLIP18.46■□□□□ 0.55
TVP23C-201ENST00000225576 TARBP2Q15633 366 aaKnown RBP18.46■□□□□ 0.55
TVP23C-201ENST00000225576 MTERF2Q49AM1 385 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 MORN1Q5T089 497 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 CNGA4Q8IV77 575 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 RETREG2Q8NC44 543 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 TMEM174Q8WUU8 243 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 HVCN1Q96D96 273 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 CCDC51Q96ER9 411 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 ACCSQ96QU6 501 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 CEP89Q96ST8 783 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 NUP58Q9BVL2 599 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 DHX33Q9H6R0 707 aaKnown RBP18.46■□□□□ 0.55
TVP23C-201ENST00000225576 ZFYVE28Q9HCC9 887 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 METTL14Q9HCE5 456 aaKnown RBP18.46■□□□□ 0.55
TVP23C-201ENST00000225576 SPTLC3Q9NUV7 552 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 FAM184BQ9ULE4 1060 aa18.46■□□□□ 0.55
TVP23C-201ENST00000225576 ABT1Q9ULW3 272 aaKnown RBP18.46■□□□□ 0.55
TVP23C-201ENST00000225576 TMEM88BA6NKF7 163 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 MFAP3LO75121 409 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 CASP14P31944 242 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 RFC5P40937 340 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 NPTX2P47972 431 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 TM4SF4P48230 202 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 SLC26A2P50443 739 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 PPP2R3AQ06190 1150 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 SLC9A9Q8IVB4 645 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 KSR1Q8IVT5 923 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 SYCP3Q8IZU3 236 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 BBXQ8WY36 941 aaPredicted RBP18.45■□□□□ 0.54
TVP23C-201ENST00000225576 COPS5Q92905 334 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 IQCDQ96DY2 449 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 TINF2Q9BSI4 451 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 MKNK1Q9BUB5 465 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 AGPAT3Q9NRZ7 376 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 DMAC2Q9NW81 257 aa18.45■□□□□ 0.54
TVP23C-201ENST00000225576 CLIC2O15247 247 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 STX10O60499 249 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 GH1P01241 217 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 ABCD1P33897 745 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 POLGP54098 1239 aaPredicted RBP18.44■□□□□ 0.54
TVP23C-201ENST00000225576 ARHGAP1Q07960 439 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 GOLGA8FQ08AF8 430 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 GOLGA8DPQ0D2H9 430 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 MAP2K5Q13163 448 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 IRF5Q13568 498 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 EMC2Q15006 297 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 SYCP1Q15431 976 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 TMEM139Q8IV31 216 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 TMEM161BQ8NDZ6 487 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 NPLOC4Q8TAT6 608 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 GLG1Q92896 1179 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 KCNN1Q92952 543 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 EMID1Q96A84 441 aaPredicted RBP18.44■□□□□ 0.54
TVP23C-201ENST00000225576 BAG1Q99933 345 aaPredicted RBP18.44■□□□□ 0.54
TVP23C-201ENST00000225576 ABHD16BQ9H3Z7 469 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 SMARCAD1Q9H4L7 1026 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 KCND1Q9NSA2 647 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 ARMCX3Q9UH62 379 aaPredicted RBP18.44■□□□□ 0.54
TVP23C-201ENST00000225576 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.44■□□□□ 0.54
TVP23C-201ENST00000225576 ZNF236Q9UL36 1845 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 CCDC169A6NNP5 214 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 H0YCG3 227 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 SLC16A4O15374 487 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 AKAP3O75969 853 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 HOXC6P09630 235 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 EPB41P11171 864 aaKnown RBP18.44■□□□□ 0.54
TVP23C-201ENST00000225576 SCP2P22307 547 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 FXR1P51114 621 aaKnown RBP eCLIP18.44■□□□□ 0.54
TVP23C-201ENST00000225576 FIGNQ5HY92 759 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 TMEM63BQ5T3F8 832 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 C12orf56Q8IXR9 622 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 ATP8B4Q8TF62 1192 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 CPLX3Q8WVH0 158 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 SLC7A3Q8WY07 619 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 BSNDQ8WZ55 320 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 IFT74Q96LB3 600 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 POLR3FQ9H1D9 316 aaPredicted RBP18.44■□□□□ 0.54
TVP23C-201ENST00000225576 KMT5AQ9NQR1 393 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 CAPN11Q9UMQ6 739 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 EXOC7Q9UPT5 735 aa18.44■□□□□ 0.54
TVP23C-201ENST00000225576 WDR81Q562E7 1941 aa18.43■□□□□ 0.54
TVP23C-201ENST00000225576 FECHP22830 423 aa18.43■□□□□ 0.54
TVP23C-201ENST00000225576 PSMC2P35998 433 aaKnown RBP18.43■□□□□ 0.54
TVP23C-201ENST00000225576 EXOC8Q8IYI6 725 aa18.43■□□□□ 0.54
TVP23C-201ENST00000225576 C17orf53Q8N3J3 647 aaPredicted RBP18.43■□□□□ 0.54
TVP23C-201ENST00000225576 NAA15Q9BXJ9 866 aaKnown RBP18.43■□□□□ 0.54
TVP23C-201ENST00000225576 TBX20Q9UMR3 447 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms