RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 RNPC3Q96LT9 517 aaKnown RBP16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 OSMRQ99650 979 aa16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 PANK2Q9BZ23 570 aa16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 GPRC5CQ9NQ84 441 aa16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 PPME1Q9Y570 386 aa16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 A0A087WZ62 844 aa16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 DGAT1O75907 488 aa16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 EYA4O95677 639 aa16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 HABP4Q5JVS0 413 aaKnown RBP16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 AXDND1Q5T1B0 1012 aaPredicted RBP16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 ATL3Q6DD88 541 aa16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 CNKSR3Q6P9H4 555 aa16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 CCDC43Q96MW1 224 aaKnown RBP16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 MTRQ99707 1265 aa16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 JPH2Q9BR39 696 aaPredicted RBP16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 FDXACB1Q9BRP7 624 aaPredicted RBP16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 CCSER1Q9C0I3 900 aa16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 ATP6V0A4Q9HBG4 840 aa16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 CFAP45Q9UL16 551 aa16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 PCDHA7Q9UN72 937 aa16.03■□□□□ 0.16
SUPT4H1-201ENST00000225504 A0A087X0B3 334 aa16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 GRXCR1A8MXD5 290 aa16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 SRGAP2CP0DJJ0 459 aa16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 CYP11B2P19099 503 aa16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 NCLP19338 710 aaKnown RBP16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 FGFR4P22455 802 aa16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 ARL2P36404 184 aa16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 NUCB2P80303 420 aa16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 LAMTOR4Q0VGL1 99 aa16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 SHC4Q6S5L8 630 aa16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.02■□□□□ 0.152e-6■□□□□ 8.8
SUPT4H1-201ENST00000225504 TSHZ1Q6ZSZ6 1077 aa16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 TMCO2Q7Z6W1 182 aaPredicted RBP16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 RTN4RL1Q86UN2 441 aaPredicted RBP16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 EXOC8Q8IYI6 725 aa16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 ASAP3Q8TDY4 903 aa16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 SEPT8Q92599 483 aa16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 IFIH1Q9BYX4 1025 aaKnown RBP16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 BLOC1S4Q9NUP1 217 aa16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 PADI3Q9ULW8 664 aa16.02■□□□□ 0.15
SUPT4H1-201ENST00000225504 TCHHQ07283 1943 aa16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 ZBBXA8MT70 800 aa16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 SOX1O00570 391 aaPredicted RBP16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 PLCG1P19174 1290 aa16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 EIF4BP23588 611 aaKnown RBP16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 IKBKEQ14164 716 aa16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 LEO1Q8WVC0 666 aaPredicted RBP16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 TCP11Q8WWU5 503 aa16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 NLRP7Q8WX94 980 aa16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 PSPC1Q8WXF1 523 aaKnown RBP16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 CALML4Q96GE6 196 aa16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 CDK5RAP3Q96JB5 506 aa16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 NLRP4Q96MN2 994 aa16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 RUSC1Q9BVN2 902 aa16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 TMX1Q9H3N1 280 aa16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 IFT122Q9HBG6 1241 aa16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 ERVK-5Q9HDB9 667 aa16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 COL4A3BPQ9Y5P4 624 aa16.01■□□□□ 0.15
SUPT4H1-201ENST00000225504 A0A1W2PPC1 479 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 CUTAO60888 179 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 RPS6KA5O75582 802 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 SSBP05455 408 aaKnown RBP eCLIP16■□□□□ 0.15
SUPT4H1-201ENST00000225504 PLA2G4BP0C869 781 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 ACTN1P12814 892 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 DARSP14868 501 aaKnown RBP16■□□□□ 0.15
SUPT4H1-201ENST00000225504 GLRA2P23416 452 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 ME1P48163 572 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 DEFB103AP81534 67 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 NFX1Q12986 1120 aaKnown RBP16■□□□□ 0.15
SUPT4H1-201ENST00000225504 DHX8Q14562 1220 aaKnown RBP16■□□□□ 0.15
SUPT4H1-201ENST00000225504 MCM6Q14566 821 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 FAM102BQ5T8I3 360 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 RINT1Q6NUQ1 792 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 C1orf186Q6ZWK4 172 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 FAM228AQ86W67 206 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 SYT2Q8N9I0 419 aaPredicted RBP16■□□□□ 0.15
SUPT4H1-201ENST00000225504 BSNDQ8WZ55 320 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 NT5C3AQ9H0P0 336 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 POLR3FQ9H1D9 316 aaPredicted RBP16■□□□□ 0.15
SUPT4H1-201ENST00000225504 MINDY3Q9H8M7 445 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 GDPD2Q9HCC8 539 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 ST3GAL5Q9UNP4 418 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 SQORQ9Y6N5 450 aa16■□□□□ 0.15
SUPT4H1-201ENST00000225504 NPHP3-ACAD11A0A0J9YXS1 232 aa15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 ABHD14A-ACY1A0A1B0GW23 586 aa15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 ENPP3O14638 875 aa15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 SLC26A4O43511 780 aa15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 GAS2O43903 313 aaKnown RBP15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 MGEA5O60502 916 aa15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 SLC12A3P55017 1021 aa15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 WDR5P61964 334 aaKnown RBP15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 RAD51AP2Q09MP3 1159 aa15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 NAALADL2Q58DX5 795 aa15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 ARSHQ5FYA8 562 aa15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 USP38Q8NB14 1042 aa15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 RASSF8Q8NHQ8 419 aa15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 KCNG4Q8TDN1 519 aa15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 LINC01599Q8WXQ3 324 aa15.99■□□□□ 0.15
SUPT4H1-201ENST00000225504 SCLT1Q96NL6 688 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms