RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 MGRN1O60291 552 aa13.68□□□□□ -0.22
PITRM1-201ENST00000224949 DNAJC8O75937 253 aaPredicted RBP13.68□□□□□ -0.22
PITRM1-201ENST00000224949 TRIM49P0CI25 452 aa13.68□□□□□ -0.22
PITRM1-201ENST00000224949 TRIM49CP0CI26 452 aa13.68□□□□□ -0.22
PITRM1-201ENST00000224949 AKR1B1P15121 316 aa13.68□□□□□ -0.22
PITRM1-201ENST00000224949 GCKP35557 465 aa13.68□□□□□ -0.22
PITRM1-201ENST00000224949 DRAP1Q14919 205 aaPredicted RBP13.68□□□□□ -0.22
PITRM1-201ENST00000224949 NFIXQ14938 502 aa13.68□□□□□ -0.22
PITRM1-201ENST00000224949 LONRF1Q17RB8 773 aa13.68□□□□□ -0.22
PITRM1-201ENST00000224949 LACTB2Q53H82 288 aaPredicted RBP13.68□□□□□ -0.22
PITRM1-201ENST00000224949 DCAF12L1Q5VU92 463 aa13.68□□□□□ -0.22
PITRM1-201ENST00000224949 KLHL29Q96CT2 875 aa13.68□□□□□ -0.22
PITRM1-201ENST00000224949 PAIP2Q9BPZ3 127 aaKnown RBP13.68□□□□□ -0.22
PITRM1-201ENST00000224949 BHMT2Q9H2M3 363 aa13.68□□□□□ -0.22
PITRM1-201ENST00000224949 ATP6V0A4Q9HBG4 840 aa13.68□□□□□ -0.22
PITRM1-201ENST00000224949 MTRF1LQ9UGC7 380 aaKnown RBP13.68□□□□□ -0.22
PITRM1-201ENST00000224949 AGAP1Q9UPQ3 857 aa13.68□□□□□ -0.22
PITRM1-201ENST00000224949 RASGRF2O14827 1237 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 MESDQ14696 234 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 SEPT2Q15019 361 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 ARSHQ5FYA8 562 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 ARHGAP27Q6ZUM4 889 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 AGAP11Q8TF27 550 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 ECT2Q9H8V3 914 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 DNAJC12Q9UKB3 198 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 DNM3Q9UQ16 869 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 ITGB4P16144 1822 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 CCDC88AQ3V6T2 1871 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 TCP11X1B4DZS4 312 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 PPFIA2O75334 1257 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 PAEPP09466 180 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 MARCKSL1P49006 195 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 NAIF1Q69YI7 327 aaPredicted RBP13.67□□□□□ -0.22
PITRM1-201ENST00000224949 SAMD1Q6SPF0 538 aaPredicted RBP13.67□□□□□ -0.22
PITRM1-201ENST00000224949 C16orf86Q6ZW13 317 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 TRMT1LQ7Z2T5 733 aaKnown RBP13.67□□□□□ -0.22
PITRM1-201ENST00000224949 TLCD1Q96CP7 247 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 FAM167BQ9BTA0 163 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 RIOX1Q9H6W3 641 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 JMJD4Q9H9V9 463 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 TBK1Q9UHD2 729 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 SHANK3Q9BYB0 1731 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 IGF2BP3O00425 579 aaKnown RBP eCLIP13.67□□□□□ -0.22
PITRM1-201ENST00000224949 CHMP2AO43633 222 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 PPP1R11O60927 126 aaPredicted RBP13.67□□□□□ -0.22
PITRM1-201ENST00000224949 FERP16591 822 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 VPS41P49754 854 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 PALB2Q86YC2 1186 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 EIF1ADQ8N9N8 165 aaKnown RBP13.67□□□□□ -0.22
PITRM1-201ENST00000224949 RFFLQ8WZ73 363 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 ALG3Q92685 438 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 SPDL1Q96EA4 605 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 HES6Q96HZ4 224 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 ZNF317Q96PQ6 595 aaPredicted RBP13.67□□□□□ -0.22
PITRM1-201ENST00000224949 PCDHA2Q9Y5H9 948 aa13.67□□□□□ -0.22
PITRM1-201ENST00000224949 ESYT2A0FGR8 921 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 TAL1P17542 331 aaPredicted RBP13.66□□□□□ -0.22
PITRM1-201ENST00000224949 MMP14P50281 582 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 PTENP60484 403 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 EPHA7Q15375 998 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 EDRF1Q3B7T1 1238 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 FRMD5Q7Z6J6 570 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 PIGOQ8TEQ8 1089 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 TRIM33Q9UPN9 1127 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 ATMINO43313 823 aaPredicted RBP13.66□□□□□ -0.22
PITRM1-201ENST00000224949 RPL13P26373 211 aaKnown RBP13.66□□□□□ -0.22
PITRM1-201ENST00000224949 RPL21P46778 160 aaKnown RBP13.66□□□□□ -0.22
PITRM1-201ENST00000224949 SNX1Q13596 522 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 USH1GQ495M9 461 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 ZC2HC1CQ53FD0 456 aaPredicted RBP13.66□□□□□ -0.22
PITRM1-201ENST00000224949 LRCH2Q5VUJ6 765 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 BARGINQ6ZT62 677 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 CATSPER3Q86XQ3 398 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 RASGEF1CQ8N431 466 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 KRT35Q92764 455 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 P3H4Q92791 437 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 NAP1L3Q99457 506 aaPredicted RBP13.66□□□□□ -0.22
PITRM1-201ENST00000224949 DLEC1Q9Y238 1755 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 PNMA6FA0A0J9YX94 578 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 GHRP10912 638 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 CREB1P16220 341 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 ORC2Q13416 577 aaPredicted RBP13.66□□□□□ -0.22
PITRM1-201ENST00000224949 TRIP13Q15645 432 aaPredicted RBP13.66□□□□□ -0.22
PITRM1-201ENST00000224949 TRIM68Q6AZZ1 485 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 FAM186BQ8IYM0 893 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 SPICE1Q8N0Z3 855 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 MYCT1Q8N699 235 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 ATXN2LQ8WWM7 1075 aaKnown RBP13.66□□□□□ -0.22
PITRM1-201ENST00000224949 SLC35C1Q96A29 364 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 TRPC6Q9Y210 931 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 STXBP5LQ9Y2K9 1186 aa13.66□□□□□ -0.22
PITRM1-201ENST00000224949 BTNL10A8MVZ5 291 aa13.65□□□□□ -0.22
PITRM1-201ENST00000224949 UPP2O95045 317 aa13.65□□□□□ -0.22
PITRM1-201ENST00000224949 NMT1P30419 496 aaKnown RBP13.65□□□□□ -0.22
PITRM1-201ENST00000224949 ALDH5A1P51649 535 aaPredicted RBP13.65□□□□□ -0.22
PITRM1-201ENST00000224949 GIT2Q14161 759 aa13.65□□□□□ -0.22
PITRM1-201ENST00000224949 CRYMQ14894 314 aa13.65□□□□□ -0.22
PITRM1-201ENST00000224949 MFSD14BQ5SR56 506 aa13.65□□□□□ -0.22
PITRM1-201ENST00000224949 DUPD1Q68J44 220 aa13.65□□□□□ -0.22
PITRM1-201ENST00000224949 PPP4R3CPQ6ZMV5 832 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms