RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 GLE1Q53GS7 698 aaKnown RBP15.92■□□□□ 0.14
CNOT3-201ENST00000221232 LDHDQ86WU2 507 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 LRRC57Q8N9N7 239 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 WDR11Q9BZH6 1224 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 DPH5Q9H2P9 285 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 AGPAT3Q9NRZ7 376 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 NOC2LQ9Y3T9 749 aaKnown RBP15.92■□□□□ 0.14
CNOT3-201ENST00000221232 NR2E1Q9Y466 385 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 LTBP1Q14766 1721 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 ANKRD31Q8N7Z5 1873 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 IPO5O00410 1097 aaKnown RBP15.92■□□□□ 0.14
CNOT3-201ENST00000221232 ENTPD3O75355 529 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 JAM2P57087 298 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 PPFIA1Q13136 1202 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 DLGAP5Q15398 846 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 GRIPAP1Q4V328 841 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 SLC35G2Q8TBE7 412 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 BORCS6Q96GS4 357 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 ZNF277Q9NRM2 450 aaPredicted RBP15.92■□□□□ 0.14
CNOT3-201ENST00000221232 SCN9AQ15858 1988 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 IGSF9BQ9UPX0 1349 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 GOLGA8KD6RF30 607 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 GAP43P17677 238 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 HPDP32754 393 aaPredicted RBP15.91■□□□□ 0.14
CNOT3-201ENST00000221232 FLT3P36888 993 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 ZNF746Q6NUN9 644 aaPredicted RBP15.91■□□□□ 0.14
CNOT3-201ENST00000221232 PIK3R5Q8WYR1 880 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 CAVIN3Q969G5 261 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 GOPCQ9HD26 462 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 ACP6Q9NPH0 428 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 OLFML3Q9NRN5 406 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 ZNF70Q9UC06 446 aaPredicted RBP15.91■□□□□ 0.14
CNOT3-201ENST00000221232 PPP1R9AQ9ULJ8 1098 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 TMX2Q9Y320 296 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 GOLGA8IPA6NC78 632 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 GOLGA8JA6NMD2 632 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 FOXN3O00409 490 aaPredicted RBP15.91■□□□□ 0.14
CNOT3-201ENST00000221232 BUB1BO60566 1050 aaPredicted RBP15.91■□□□□ 0.14
CNOT3-201ENST00000221232 SOX5P35711 763 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 BMT2Q1RMZ1 405 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 CEP85LQ5SZL2 805 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 ALS2CLQ60I27 953 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 AADACL2Q6P093 401 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 IL31RAQ8NI17 732 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 ARHGEF26Q96DR7 871 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 NACC1Q96RE7 527 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 FIZ1Q96SL8 496 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 INTS2Q9H0H0 1204 aaKnown RBP15.91■□□□□ 0.14
CNOT3-201ENST00000221232 NEUROG2Q9H2A3 272 aa15.91■□□□□ 0.14
CNOT3-201ENST00000221232 F8VZ95 297 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 K7ENM7 598 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 PIK3CDO00329 1044 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 DAPK3O43293 454 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 PPFIA4O75335 1185 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 ITGB5P18084 799 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 GUCY1A3Q02108 690 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 MCTP2Q6DN12 878 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 SLC5A5Q92911 643 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 SH3GL2Q99962 352 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 TUFT1Q9NNX1 390 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 PLAAQ9Y263 795 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 NFIBO00712 420 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 SLC16A3O15427 465 aaKnown RBP15.9■□□□□ 0.14
CNOT3-201ENST00000221232 TTI1O43156 1089 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 TNFAIP3P21580 790 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 INPP5BP32019 993 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 GCLMP48507 274 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 PHLDB3Q6NSJ2 640 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 IQCKQ8N0W5 287 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 SLC20A1Q8WUM9 679 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 PDGFDQ9GZP0 370 aaPredicted RBP15.9■□□□□ 0.14
CNOT3-201ENST00000221232 FAM107BQ9H098 131 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 THAP2Q9H0W7 228 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 UBE2TQ9NPD8 197 aaPredicted RBP15.9■□□□□ 0.14
CNOT3-201ENST00000221232 GPRC5CQ9NQ84 441 aa15.9■□□□□ 0.14
CNOT3-201ENST00000221232 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 FGGP02679 453 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 FERP16591 822 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 PRKCIP41743 596 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 IFI16Q16666 785 aaKnown RBP15.89■□□□□ 0.13
CNOT3-201ENST00000221232 PADI6Q6TGC4 694 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 CHURC1Q8WUH1 139 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 TEKT3Q9BXF9 490 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 TMOD4Q9NZQ9 345 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 COL20A1Q9P218 1284 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 CCPG1Q9ULG6 757 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 PGRMC1O00264 195 aaKnown RBP15.89■□□□□ 0.13
CNOT3-201ENST00000221232 MYL7Q01449 175 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 PPP2R5CQ13362 524 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 C10orf76Q5T2E6 689 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 DAW1Q8N136 415 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 OGFOD1Q8N543 542 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 KAT5Q92993 513 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 RNPC3Q96LT9 517 aaKnown RBP15.89■□□□□ 0.13
CNOT3-201ENST00000221232 CBWD1Q9BRT8 395 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 MRPL11Q9Y3B7 192 aaKnown RBP15.89■□□□□ 0.13
CNOT3-201ENST00000221232 SORBS3O60504 671 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 RPS6KA5O75582 802 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 VIL1P09327 827 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms