RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 CCDC188H7C350 402 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 CCNHP51946 323 aaPredicted RBP11.79□□□□□ -0.52
USP31-201ENST00000219689 MYCBPAPQ8TBZ2 947 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 DDX47Q9H0S4 455 aaKnown RBP11.79□□□□□ -0.52
USP31-201ENST00000219689 NOS1P29475 1434 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 CCDC22O60826 627 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 EIF6P56537 245 aaKnown RBP11.79□□□□□ -0.52
USP31-201ENST00000219689 CCDC142Q17RM4 750 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 ZC3H12BQ5HYM0 836 aaKnown RBP11.79□□□□□ -0.52
USP31-201ENST00000219689 NSUN7Q8NE18 718 aaKnown RBP11.79□□□□□ -0.52
USP31-201ENST00000219689 INPP5DQ92835 1189 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 HERC5Q9UII4 1024 aaKnown RBP11.79□□□□□ -0.52
USP31-201ENST00000219689 IPPQ9Y573 584 aa11.79□□□□□ -0.52
USP31-201ENST00000219689 MFN2O95140 757 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 AARSP49588 968 aaKnown RBP eCLIP11.78□□□□□ -0.52
USP31-201ENST00000219689 OTUD4Q01804 1114 aaKnown RBP11.78□□□□□ -0.52
USP31-201ENST00000219689 PBXIP1Q96AQ6 731 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 TMA16Q96EY4 203 aaKnown RBP11.78□□□□□ -0.52
USP31-201ENST00000219689 MMADHCQ9H3L0 296 aaPredicted RBP11.78□□□□□ -0.52
USP31-201ENST00000219689 TTC7AQ9ULT0 858 aaPredicted RBP11.78□□□□□ -0.52
USP31-201ENST00000219689 STK24Q9Y6E0 443 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 USH1GQ495M9 461 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 EAPPQ56P03 285 aaPredicted RBP11.78□□□□□ -0.52
USP31-201ENST00000219689 LRIG3Q6UXM1 1119 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 ZNF277Q9NRM2 450 aaPredicted RBP11.78□□□□□ -0.52
USP31-201ENST00000219689 MAPK11Q15759 364 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 CCNI2Q6ZMN8 369 aaPredicted RBP11.78□□□□□ -0.52
USP31-201ENST00000219689 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 NACA2Q9H009 215 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 ITGB1BP2Q9UKP3 347 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 ABCC1P33527 1531 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 GSTT1P30711 240 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 SERPINB8P50452 374 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 ZNF654Q8IZM8 581 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 DDI1Q8WTU0 396 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 WDR60Q8WVS4 1066 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 DBNDD2Q9BQY9 259 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 SERPINB2P05120 415 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 OLA1Q9NTK5 396 aaKnown RBP11.78□□□□□ -0.52
USP31-201ENST00000219689 AGBL2Q5U5Z8 902 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 ANGPTL8Q6UXH0 198 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 KBTBD3Q8NAB2 608 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 COL4A3BPQ9Y5P4 624 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 ADGRF5Q8IZF2 1346 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 SYNJ2BP-COX16A0A087WUM0 186 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 KRT76Q01546 638 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 DSCC1Q9BVC3 393 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 TSSK1BQ9BXA7 367 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 TRABDQ9H4I3 376 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 COX16Q9P0S2 106 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 ZNF839A8K0R7 811 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 DMC1Q14565 340 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 TBC1D9BQ66K14 1250 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 ATAD3AQ9NVI7 634 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 IVNS1ABPQ9Y6Y0 642 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 PRPF6O94906 941 aaKnown RBP11.78□□□□□ -0.52
USP31-201ENST00000219689 CLPTM1O96005 669 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 OR52Z1P0C646 297 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 MAP3K10Q02779 954 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 LPCAT2Q7L5N7 544 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 ZNF786Q8N393 782 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 LINC00301Q8NCQ3 95 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 GPKOWQ92917 476 aaPredicted RBP eCLIP11.78□□□□□ -0.52
USP31-201ENST00000219689 HAO1Q9UJM8 370 aa11.78□□□□□ -0.52
USP31-201ENST00000219689 CHD5Q8TDI0 1954 aa11.77□□□□□ -0.52
USP31-201ENST00000219689 PITPNM2Q9BZ72 1349 aa11.77□□□□□ -0.52
USP31-201ENST00000219689 K7ENM7 598 aa11.77□□□□□ -0.52
USP31-201ENST00000219689 ZNF211Q13398 564 aaPredicted RBP11.77□□□□□ -0.52
USP31-201ENST00000219689 LRRC41Q15345 812 aa11.77□□□□□ -0.52
USP31-201ENST00000219689 SMARCAL1Q9NZC9 954 aa11.77□□□□□ -0.52
USP31-201ENST00000219689 BCORL1Q5H9F3 1711 aa11.77□□□□□ -0.52
USP31-201ENST00000219689 AKAP10O43572 662 aa11.77□□□□□ -0.52
USP31-201ENST00000219689 KCNH5Q8NCM2 988 aa11.77□□□□□ -0.52
USP31-201ENST00000219689 ZNF594Q96JF6 807 aaPredicted RBP11.77□□□□□ -0.52
USP31-201ENST00000219689 FAM192AQ9GZU8 254 aa11.77□□□□□ -0.52
USP31-201ENST00000219689 MARCOQ9UEW3 520 aaPredicted RBP11.77□□□□□ -0.52
USP31-201ENST00000219689 H2AFXP16104 143 aaPredicted RBP11.77□□□□□ -0.52
USP31-201ENST00000219689 CCDC149Q6ZUS6 474 aa11.77□□□□□ -0.52
USP31-201ENST00000219689 NOP9Q86U38 636 aaKnown RBP11.77□□□□□ -0.52
USP31-201ENST00000219689 SFMBT1Q9UHJ3 866 aa11.77□□□□□ -0.52
USP31-201ENST00000219689 MAP3K5Q99683 1374 aa11.77□□□□□ -0.52
USP31-201ENST00000219689 CCDC88AQ3V6T2 1871 aa11.77□□□□□ -0.52
USP31-201ENST00000219689 P4HA1P13674 534 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 CPA2P48052 419 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 SLC39A6Q13433 755 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 BTN2A1Q7KYR7 527 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 FAM81BQ96LP2 452 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 TTC25Q96NG3 672 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 KLHL4Q9C0H6 718 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 IPO5O00410 1097 aaKnown RBP11.77□□□□□ -0.53
USP31-201ENST00000219689 ORC4O43929 436 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 GPS1Q13098 491 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 LONRF1Q17RB8 773 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 ZNF804AQ7Z570 1209 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 STKLD1Q8NE28 680 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 RPS6KC1Q96S38 1066 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 TRIM39Q9HCM9 518 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 DDX25Q9UHL0 483 aaKnown RBP11.77□□□□□ -0.53
USP31-201ENST00000219689 ZMYND8Q9ULU4 1186 aaPredicted RBP11.77□□□□□ -0.53
USP31-201ENST00000219689 CFAP99D6REC4 459 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms