RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 ARHGEF25Q86VW2 580 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 LRRC59Q96AG4 307 aaKnown RBP15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 ATXN7L3BQ96GX2 97 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 PLEKHA8Q96JA3 519 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 CCDC24Q8N4L8 307 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 NGRNQ9NPE2 291 aaKnown RBP15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 EIF2AK4Q9P2K8 1649 aaKnown RBP15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 EYA2O00167 538 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 GOLGA8HP0CJ92 632 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 ADCK5Q3MIX3 580 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 RAB42Q8N4Z0 105 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 PTPN21Q16825 1174 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 FASTKD1Q53R41 847 aaKnown RBP15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 APPL2Q8NEU8 664 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 DBNDD2Q9BQY9 259 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
SPTLC2-201ENST00000216484 DLGAP3O95886 979 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 KBTBD3Q8NAB2 608 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 NNMTP40261 264 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 PCDH11XQ9BZA7 1347 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 PCDH11YQ9BZA8 1340 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 MEFVO15553 781 aaPredicted RBP15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 CLIC4Q9Y696 253 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 ATP8B1O43520 1251 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 KRT38O76015 456 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 NCALDP61601 193 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 C11orf74Q86VG3 221 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 CNBD2Q96M20 576 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 MAD2L2Q9UI95 211 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 PCDHA1Q9Y5I3 950 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.081e-8■■□□□ 11.7
SPTLC2-201ENST00000216484 PNMA1Q8ND90 353 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 NRBP1Q9UHY1 535 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 ALDH1B1P30837 517 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 PARP9Q8IXQ6 854 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 TRIM13O60858 407 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 ARL4CP56559 192 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 TBC1D22AQ8WUA7 517 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 PARVBQ9HBI1 364 aa15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 FARP1Q9Y4F1 1045 aaPredicted RBP15.54■□□□□ 0.08
SPTLC2-201ENST00000216484 CDC25BP30305 580 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 PPP3CCP48454 512 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 ERFP50548 548 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 CSE1LP55060 971 aaKnown RBP15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 MAGOHP61326 146 aaKnown RBP15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 GTF2IP78347 998 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 GALNT17Q6IS24 598 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 KLHL24Q6TFL4 600 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 DCPSQ96C86 337 aaKnown RBP15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 ASIC4Q96FT7 647 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 FAM96AQ9H5X1 160 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 CNGB3Q9NQW8 809 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 ZMYND8Q9ULU4 1186 aaPredicted RBP15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 MED23Q9ULK4 1368 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 KDM5AP29375 1690 aaKnown RBP15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 AKAP10O43572 662 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 KCNA2P16389 499 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 ITGAXP20702 1163 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 ABCD1P33897 745 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 ZAP70P43403 619 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 DSTYKQ6XUX3 929 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 TMA16Q96EY4 203 aaKnown RBP15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 SPTLC3Q9NUV7 552 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 TTC7AQ9ULT0 858 aaPredicted RBP15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 TARSL2A2RTX5 802 aaKnown RBP15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 ANGPT2O15123 496 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 PSMA3P25788 255 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 PRKCQQ04759 706 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 INPP5AQ14642 412 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 SPICE1Q8N0Z3 855 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 CABLES1Q8TDN4 633 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 PARD6BQ9BYG5 372 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 CAPN1P07384 714 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 CCND2P30279 289 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 RPS6P62753 249 aaKnown RBP15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 TP53BP2Q13625 1128 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 PASD1Q8IV76 773 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 DCDC2Q9UHG0 476 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 KIF1CO43896 1103 aaKnown RBP15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 MRPS25P82663 173 aaKnown RBP15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 DCAF15Q66K64 600 aa15.53■□□□□ 0.08
SPTLC2-201ENST00000216484 PRAMEP78395 509 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 KRT31Q15323 416 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 TBC1D9BQ66K14 1250 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 THEM5Q8N1Q8 247 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 GID8Q9NWU2 228 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 CCNL1Q9UK58 526 aaPredicted RBP15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 RASSF9O75901 435 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 FGGP02679 453 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 GAP43P17677 238 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 ERICH1Q86X53 443 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 METTL22Q9BUU2 404 aaPredicted RBP15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 ARHGEF11O15085 1522 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 ZNF500O60304 480 aaPredicted RBP15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 UBXN2AP68543 259 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 ICE2Q659A1 982 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 VMP1Q96GC9 406 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 TK2O00142 265 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 C4BPBP20851 252 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 ALDH18A1P54886 795 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms