RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 ERVK-24P63145 666 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 IRX5P78411 483 aaPredicted RBP11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 TBC1D8BQ0IIM8 1120 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 SQSTM1Q13501 440 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 MTF1Q14872 753 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 ARSHQ5FYA8 562 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 POTEGQ6S5H5 508 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 POTEEQ6S8J3 1075 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 NIPA1Q7RTP0 329 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 HOOK2Q96ED9 719 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 FRMD6Q96NE9 622 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 SLF1Q9BQI6 1058 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 WDR18Q9BV38 432 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 GLIS2Q9BZE0 524 aaPredicted RBP11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 DNAI1Q9UI46 699 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 RNF225M0QZC1 329 aaPredicted RBP11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 EYA4O95677 639 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 GNA14O95837 355 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 SSBP05455 408 aaKnown RBP eCLIP11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 GMPSP49915 693 aaPredicted RBP11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 NCBP1Q09161 790 aaKnown RBP11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 MEA1Q16626 185 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 VWA3BQ502W6 1294 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 MEI1Q5TIA1 1274 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 ZBTB9Q96C00 473 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 EIF2AK1Q9BQI3 630 aaKnown RBP11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 ZNF536O15090 1300 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 FRMPD4Q14CM0 1322 aa11.65□□□□□ -0.54
APOBEC3D-201ENST00000216099 PAPPA2Q9BXP8 1791 aa11.65□□□□□ -0.55
APOBEC3D-201ENST00000216099 CCDC66A2RUB6 948 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 FDX1P10109 184 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 INPP5BP32019 993 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 ZBED6P86452 979 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 CDK17Q00537 523 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 FKBP3Q00688 224 aaKnown RBP11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 ZYXQ15942 572 aaKnown RBP11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 ARHGAP27Q6ZUM4 889 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 KRT26Q7Z3Y9 468 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 DESI2Q9BSY9 194 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 WDR11Q9BZH6 1224 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 MRPL44Q9H9J2 332 aaKnown RBP11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 FBXO28Q9NVF7 368 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 ZIM2Q9NZV7 527 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 MEIS1O00470 390 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 PIP5K1CO60331 668 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 BCRP11274 1271 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 GJA8P48165 433 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 SATB1Q01826 763 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 POU5F1BQ06416 359 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 GIT2Q14161 759 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 EDRF1Q3B7T1 1238 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 Q3C1V9 767 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 CEP55Q53EZ4 464 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 DCAF15Q66K64 600 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 CCSAPQ6IQ19 270 aaPredicted RBP11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 ANKS3Q6ZW76 656 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 OTOP1Q7RTM1 612 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 KIAA0907Q7Z7F0 614 aaPredicted RBP11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 TBC1D5Q92609 795 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 CEP89Q96ST8 783 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 EDEM3Q9BZQ6 932 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 ZNF112Q9UJU3 913 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 CCPG1Q9ULG6 757 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 PCDHGA10Q9Y5H3 936 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 PTPRFP10586 1907 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 KIAA1217Q5T5P2 1943 aa11.64□□□□□ -0.55
APOBEC3D-201ENST00000216099 POLR2AP24928 1970 aaKnown RBP11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 RASSF10A6NK89 507 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 PES1O00541 588 aaKnown RBP11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 KIF3CO14782 793 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 GAP43P17677 238 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 CASQ1P31415 396 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 PRELPP51888 382 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 USP14P54578 494 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 LRCH2Q5VUJ6 765 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 EPM2AIP1Q7L775 607 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 CCDC84Q86UT8 332 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 CYP2W1Q8TAV3 490 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 NEK9Q8TD19 979 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 HSD17B14Q9BPX1 270 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 KCTD10Q9H3F6 313 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 NDST4Q9H3R1 872 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 MYO1AQ9UBC5 1043 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 CNOT7Q9UIV1 285 aaKnown RBP11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 ZNF215Q9UL58 517 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 SIK3Q9Y2K2 1263 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 GJA3Q9Y6H8 435 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 SCP2P22307 547 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 GNG11P61952 73 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 BMT2Q1RMZ1 405 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 HERC4Q5GLZ8 1057 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 B3GNT9Q6UX72 402 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 APOBEC3FQ8IUX4 373 aaKnown RBP11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 GLIS3Q8NEA6 775 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 SCFD1Q8WVM8 642 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 CLEC4DQ8WXI8 215 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 TIFAQ96CG3 184 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 BORCS6Q96GS4 357 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 RIT2Q99578 217 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms