RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 PRPF6O94906 941 aaKnown RBP17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 PEX3P56589 373 aa17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 GJA9P57773 515 aa17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 LRRC63Q05C16 580 aa17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 DMP1Q13316 513 aaPredicted RBP17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 KNOP1Q1ED39 458 aaKnown RBP17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 MAP3K21Q5TCX8 1036 aa17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 CDKAL1Q5VV42 579 aa17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 NELFCDQ8IXH7 590 aa17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 SPIRE2Q8WWL2 714 aa17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 TMEM143Q96AN5 459 aa17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 JPH2Q9BR39 696 aaPredicted RBP17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 POLR3FQ9H1D9 316 aaPredicted RBP17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 ST6GALNAC4Q9H4F1 302 aa17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 WBP1LQ9NX94 342 aa17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 KCNG1Q9UIX4 513 aa17.59■□□□□ 0.41
SNRPD3-201ENST00000215829 IGKV6-21A0A0C4DH24 114 aa17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 GAS2O43903 313 aaKnown RBP17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 PPP1R37O75864 691 aa17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 UBE4BO95155 1302 aa17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 ATP1A3P13637 1013 aa17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 INSRRP14616 1297 aa17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 HOXD13P35453 343 aa17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 ARL2P36404 184 aa17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 NPTX2P47972 431 aa17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 SMTNP53814 917 aa17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 NCKAP1LP55160 1127 aa17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 IRX5P78411 483 aaPredicted RBP17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 ALCAMQ13740 583 aa17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 FSCN1Q16658 493 aaKnown RBP17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 ZCWPW2Q504Y3 356 aa17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 ZC2HC1CQ53FD0 456 aaPredicted RBP17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 CSGALNACT2Q8N6G5 542 aa17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 TSG101Q99816 390 aa17.58■□□□□ 0.41
SNRPD3-201ENST00000215829 COL1A2P08123 1366 aa17.58■□□□□ 0.4
SNRPD3-201ENST00000215829 K7ENM7 598 aa17.58■□□□□ 0.4
SNRPD3-201ENST00000215829 ADCY5O95622 1261 aa17.58■□□□□ 0.4
SNRPD3-201ENST00000215829 F2P00734 622 aa17.58■□□□□ 0.4
SNRPD3-201ENST00000215829 RARBP10826 455 aa17.58■□□□□ 0.4
SNRPD3-201ENST00000215829 CDK11BP21127 795 aaKnown RBP17.58■□□□□ 0.4
SNRPD3-201ENST00000215829 CCND3P30281 292 aaPredicted RBP17.58■□□□□ 0.4
SNRPD3-201ENST00000215829 NKX3-2P78367 333 aa17.58■□□□□ 0.4
SNRPD3-201ENST00000215829 BEX3Q00994 111 aa17.58■□□□□ 0.4
SNRPD3-201ENST00000215829 NOC3LQ8WTT2 800 aaKnown RBP17.58■□□□□ 0.4
SNRPD3-201ENST00000215829 BSNDQ8WZ55 320 aa17.58■□□□□ 0.4
SNRPD3-201ENST00000215829 KAT2BQ92831 832 aa17.58■□□□□ 0.4
SNRPD3-201ENST00000215829 IFT74Q96LB3 600 aa17.58■□□□□ 0.4
SNRPD3-201ENST00000215829 SRRTQ9BXP5 876 aaKnown RBP17.58■□□□□ 0.4
SNRPD3-201ENST00000215829 UPF3AQ9H1J1 476 aaKnown RBP17.58■□□□□ 0.4
SNRPD3-201ENST00000215829 CCDC169A6NNP5 214 aa17.57■□□□□ 0.4
SNRPD3-201ENST00000215829 C6orf222P0C671 652 aaPredicted RBP17.57■□□□□ 0.4
SNRPD3-201ENST00000215829 GTF2BQ00403 316 aa17.57■□□□□ 0.4
SNRPD3-201ENST00000215829 KCNA1Q09470 495 aa17.57■□□□□ 0.4
SNRPD3-201ENST00000215829 HSP90AA4PQ58FG1 418 aa17.57■□□□□ 0.4
SNRPD3-201ENST00000215829 IER5Q5VY09 327 aa17.57■□□□□ 0.4
SNRPD3-201ENST00000215829 PPP4R3CPQ6ZMV5 832 aa17.57■□□□□ 0.4
SNRPD3-201ENST00000215829 HAUS6Q7Z4H7 955 aa17.57■□□□□ 0.4
SNRPD3-201ENST00000215829 SLAIN1Q8ND83 568 aa17.57■□□□□ 0.4
SNRPD3-201ENST00000215829 TRAPPC12Q8WVT3 735 aa17.57■□□□□ 0.4
SNRPD3-201ENST00000215829 TRIM5Q9C035 493 aa17.57■□□□□ 0.4
SNRPD3-201ENST00000215829 THAP9Q9H5L6 903 aa17.57■□□□□ 0.4
SNRPD3-201ENST00000215829 SPC25Q9HBM1 224 aa17.57■□□□□ 0.4
SNRPD3-201ENST00000215829 KMT5AQ9NQR1 393 aa17.57■□□□□ 0.4
SNRPD3-201ENST00000215829 PDXKO00764 312 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 SLC16A4O15374 487 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 MAGEB2O15479 319 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 KPNA6O60684 536 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 FANCCQ00597 558 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 DNAJC5GQ8N7S2 189 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 TMEM161BQ8NDZ6 487 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 TCP11Q8WWU5 503 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 SUGCTQ9HAC7 445 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 TRAF3IP3Q9Y228 551 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 TRIM17Q9Y577 477 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 C22orf31O95567 290 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 FGFR1OPO95684 399 aaKnown RBP17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 MYL3P08590 195 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 GLRA2P23416 452 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 KLRC1P26715 233 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 FKBP3Q00688 224 aaKnown RBP17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 MKRN4PQ13434 485 aaPredicted RBP17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 PPP2R5AQ15172 486 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 EDRF1Q3B7T1 1238 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 GNASQ5JWF2 1037 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 IRF2BP1Q8IU81 584 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 KSR1Q8IVT5 923 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 ASAP3Q8TDY4 903 aa17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 TYW1Q9NV66 732 aaKnown RBP17.56■□□□□ 0.4
SNRPD3-201ENST00000215829 MYADML2A6NDP7 307 aa17.55■□□□□ 0.4
SNRPD3-201ENST00000215829 H0YCG3 227 aa17.55■□□□□ 0.4
SNRPD3-201ENST00000215829 HAS3O00219 553 aa17.55■□□□□ 0.4
SNRPD3-201ENST00000215829 CALUO43852 315 aaPredicted RBP17.55■□□□□ 0.4
SNRPD3-201ENST00000215829 PGK1P00558 417 aa17.55■□□□□ 0.4
SNRPD3-201ENST00000215829 SERPINC1P01008 464 aa17.55■□□□□ 0.4
SNRPD3-201ENST00000215829 GRK4P32298 578 aa17.55■□□□□ 0.4
SNRPD3-201ENST00000215829 NAMPTP43490 491 aa17.55■□□□□ 0.4
SNRPD3-201ENST00000215829 ZNF75DP51815 510 aa17.55■□□□□ 0.4
SNRPD3-201ENST00000215829 IGBP1P78318 339 aa17.55■□□□□ 0.4
SNRPD3-201ENST00000215829 PURAQ00577 322 aaKnown RBP17.55■□□□□ 0.4
SNRPD3-201ENST00000215829 SPAG1Q07617 926 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms