RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 LY9Q9HBG7 655 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 TRIM49BA6NDI0 452 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 GNAT1P11488 350 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 TMPRSS15P98073 1019 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 DEUP1Q05D60 604 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 CYB5R4Q7L1T6 521 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 SCG3Q8WXD2 468 aaKnown RBP14.5□□□□□ -0.09
SF3A1-201ENST00000215793 MRPL46Q9H2W6 279 aaKnown RBP14.5□□□□□ -0.09
SF3A1-201ENST00000215793 XAB2Q9HCS7 855 aaKnown RBP14.5□□□□□ -0.09
SF3A1-201ENST00000215793 SUN2Q9UH99 717 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 PLEKHG2Q9H7P9 1386 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 ABCB11O95342 1321 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 ARAP3Q8WWN8 1544 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 SLFNL1Q499Z3 407 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 LMCD1Q9NZU5 365 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 USP17L15C9J2P7 530 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 USP17L13C9JLJ4 530 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 USP17L11C9JVI0 530 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 USP17L18D6R9N7 530 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 USP17L22D6RA61 530 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 USP17L17D6RBQ6 530 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 USP17L19D6RCP7 530 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 USP17L20D6RJB6 530 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 CFLARO15519 480 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 ATP5HO75947 161 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 P4HBP07237 508 aaKnown RBP14.5□□□□□ -0.09
SF3A1-201ENST00000215793 MMEP08473 750 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 USP17L24Q0WX57 530 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 NFX1Q12986 1120 aaKnown RBP14.5□□□□□ -0.09
SF3A1-201ENST00000215793 KLHL38Q2WGJ6 581 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 ZNF699Q32M78 642 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 USP17L6PQ6QN14 398 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 FBXL13Q8NEE6 735 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 CXorf38Q8TB03 319 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 MORC4Q8TE76 937 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 PSPC1Q8WXF1 523 aaKnown RBP14.5□□□□□ -0.09
SF3A1-201ENST00000215793 CYP26B1Q9NR63 512 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 DNAJC17Q9NVM6 304 aaKnown RBP14.5□□□□□ -0.09
SF3A1-201ENST00000215793 UNC13AQ9UPW8 1703 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 E9PMD0 336 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 BARHL2Q9NY43 387 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 KLHL8Q9P2G9 620 aaPredicted RBP14.5□□□□□ -0.09
SF3A1-201ENST00000215793 MAGI3Q5TCQ9 1506 aa14.5□□□□□ -0.09
SF3A1-201ENST00000215793 RASA4BC9J798 803 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 RASA4O43374 803 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 QARSP47897 775 aaKnown RBP14.49□□□□□ -0.09
SF3A1-201ENST00000215793 SNAP25P60880 206 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 NRBF2Q96F24 287 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 GCNAQ96QF7 691 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 ELAC2Q9BQ52 826 aaKnown RBP14.49□□□□□ -0.09
SF3A1-201ENST00000215793 EDEM3Q9BZQ6 932 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 ALDH8A1Q9H2A2 487 aaPredicted RBP14.49□□□□□ -0.09
SF3A1-201ENST00000215793 MYO5CQ9NQX4 1742 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 ARID5BQ14865 1188 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 ZNF394Q53GI3 561 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 FAM182BQ5T319 152 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 AP1ARQ63HQ0 302 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 SGMS1Q86VZ5 419 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 THEM5Q8N1Q8 247 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 C2orf40Q9H1Z8 148 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 G3BP2Q9UN86 482 aaKnown RBP14.49□□□□□ -0.09
SF3A1-201ENST00000215793 KPNA7A9QM74 516 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 FDX1P10109 184 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 ADRA2BP18089 450 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 TXNRD1Q16881 649 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 RWDD4Q6NW29 188 aaKnown RBP14.49□□□□□ -0.09
SF3A1-201ENST00000215793 TMEM270Q6UE05 265 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 ENOSF1Q7L5Y1 443 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 TTC17Q96AE7 1141 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 CEP95Q96GE4 821 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 PPP1R16BQ96T49 567 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 KRT82Q9NSB4 513 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 SPATS2LQ9NUQ6 558 aaKnown RBP14.49□□□□□ -0.09
SF3A1-201ENST00000215793 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.49□□□□□ -0.09
SF3A1-201ENST00000215793 PBRM1Q86U86 1689 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 GRID2IPA4D2P6 1211 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 LMNAP02545 664 aaKnown RBP14.49□□□□□ -0.09
SF3A1-201ENST00000215793 NAALADL2Q58DX5 795 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 ELMSAN1Q6PJG2 1045 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 ZBTB18Q99592 522 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 TRIM15Q9C019 465 aa14.49□□□□□ -0.09
SF3A1-201ENST00000215793 HUS1O60921 280 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 TRPA1O75762 1119 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 CHRNA3P32297 505 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 MDM2Q00987 491 aaPredicted RBP14.48□□□□□ -0.09
SF3A1-201ENST00000215793 ZNF568Q3ZCX4 644 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.48□□□□□ -0.09
SF3A1-201ENST00000215793 FSCBQ5H9T9 825 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 PRPF38AQ8NAV1 312 aaKnown RBP14.48□□□□□ -0.09
SF3A1-201ENST00000215793 KRT7P08729 469 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 SDC4P31431 198 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 PRKAG2Q9UGJ0 569 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 ADAM21Q9UKJ8 722 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 STAP1Q9ULZ2 295 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 APOBEC2Q9Y235 224 aaKnown RBP14.48□□□□□ -0.09
SF3A1-201ENST00000215793 MROH7-TTC4A0A0A0MT08 1334 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 A0A1W2PQC6 194 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 DENND3A2RUS2 1198 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 VAMP7P51809 220 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 OXER1Q8TDS5 423 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms