RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 LIN9Q5TKA1 542 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 GUF1Q8N442 669 aaKnown RBP13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 IWS1Q96ST2 819 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 LBHD1Q9BQE6 289 aaPredicted RBP13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 GCNT4Q9P109 453 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 PARP2Q9UGN5 583 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 PLAAQ9Y263 795 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 USP17L15C9J2P7 530 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 USP17L13C9JLJ4 530 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 USP17L11C9JVI0 530 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 USP17L18D6R9N7 530 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 USP17L22D6RA61 530 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 USP17L17D6RBQ6 530 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 USP17L19D6RCP7 530 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 USP17L20D6RJB6 530 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 SERPINB6P35237 376 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 PHEXP78562 749 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 USP17L24Q0WX57 530 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 STK4Q13043 487 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 LLGL1Q15334 1064 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 FAM83BQ5T0W9 1011 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 USP17L6PQ6QN14 398 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 FBXO33Q7Z6M2 555 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 ARL10Q8N8L6 244 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 SMC1BQ8NDV3 1235 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 PIP4K2CQ8TBX8 421 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 MAGOHBQ96A72 148 aaKnown RBP13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 TXLNGQ9NUQ3 528 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 STOML1Q9UBI4 398 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 TRIM10Q9UDY6 481 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 GDF11O95390 407 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 TNNI1P19237 187 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 LMNB1P20700 586 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 PAPOLAP51003 745 aaKnown RBP13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 MESDQ14696 234 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 NFRKBQ6P4R8 1299 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 PPP1R21Q6ZMI0 780 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 LCA5Q86VQ0 697 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 FBXL16Q8N461 479 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 LRRC8CQ8TDW0 803 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 DLGAP2Q9P1A6 1054 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 GGT7Q9UJ14 662 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 MRPL11Q9Y3B7 192 aaKnown RBP13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 ESYT3A0FGR9 886 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 E9PMD0 336 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 TPD52L2O43399 206 aaKnown RBP13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 PALMO75781 387 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 TDP2O95551 362 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 TMEM154Q6P9G4 183 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 ELOA2Q8IYF1 753 aaPredicted RBP13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 AP1M1Q9BXS5 423 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 PCDHA6Q9UN73 950 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 DAAM1Q9Y4D1 1078 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 PCDHA8Q9Y5H6 950 aa13.06□□□□□ -0.32
TSPAN9-201ENST00000011898 C10orf71Q711Q0 1435 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 DNAJC6O75061 913 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 MMEP08473 750 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 CCDC13Q8IYE1 715 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 ANO3Q9BYT9 981 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 DBNDD1Q9H9R9 158 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 ETNK1Q9HBU6 452 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 TCP10L2B9ZVM9 353 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 ALAS1P13196 640 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 STRN3Q13033 797 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 OLFML2BQ68BL8 750 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 DCUN1D2Q6PH85 259 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 HIC2Q96JB3 615 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 MMS19Q96T76 1030 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 Q9H521 79 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 CNOT10Q9H9A5 744 aaKnown RBP13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 NOD2Q9HC29 1040 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 ITIH6Q6UXX5 1313 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 SFI1A8K8P3 1242 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 PPP1R3GB7ZBB8 358 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 SERPINB4P48594 390 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 PLTPP55058 493 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 SLC44A4Q53GD3 710 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 EGFL6Q8IUX8 553 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 NEDD1Q8NHV4 660 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 DNAI2Q9GZS0 605 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 EPN3Q9H201 632 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 THEGQ9P2T0 379 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 AGTPBP1Q9UPW5 1226 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 TUBGCP6Q96RT7 1819 aa13.05□□□□□ -0.32
TSPAN9-201ENST00000011898 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 TESPA1A2RU30 521 aaPredicted RBP13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 DKC1O60832 514 aaKnown RBP eCLIP13.04□□□□□ -0.324e-23■■■■■ 103
TSPAN9-201ENST00000011898 DLATP10515 647 aaKnown RBP13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 LSP1P33241 339 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 DRP2Q13474 957 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 FAM102BQ5T8I3 360 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 C15orf52Q6ZUT6 534 aaKnown RBP13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 USP6NLQ92738 828 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 TMEM60Q9H2L4 133 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 ZNF446Q9NWS9 450 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 SALL1Q9NSC2 1324 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 NCK2O43639 380 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 IRX4P78413 519 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 CDC37Q16543 378 aaPredicted RBP13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 XKR9Q5GH70 373 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms