RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Taf4bG5E8Z2 855 aa11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 Pth1rP41593 591 aa11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 Gm3414Q3TNU4 584 aa11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 Krt15Q61414 452 aa11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 TbckQ8BM85 762 aa11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 Tada3Q8R0L9 432 aa11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 RnpepQ8VCT3 650 aaKnown RBP11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 Rpn1Q91YQ5 608 aaKnown RBP11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 Hspbp1Q99P31 357 aaKnown RBP11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 Mzb1Q9D8I1 188 aa11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 Tlr5Q9JLF7 859 aa11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 Plod3Q9R0E1 741 aa11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 Bzw2Q91VK1 419 aaKnown RBP11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 Spag5Q7TME2 1165 aa11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 Calml4Q91WQ9 153 aa11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 MicalclQ9D5U9 680 aa11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 Sdr42e1Q9D665 394 aa11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 Slc15a2Q9ES07 729 aa11.81□□□□□ -0.52
Lig3-210ENSMUST00000173347 Cyth3O08967 399 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Mdm4O35618 489 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Gad1P48318 593 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Atoh1P48985 351 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Serpina1eQ00898 413 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 NeblQ0II04 452 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Lrig2Q52KR2 1054 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Moxd2Q7TT41 619 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 PdxkQ8K183 312 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Snx10Q9CWT3 201 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Gm8298J3QPI0 401 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Stra6O70491 670 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Hmgcs2P54869 508 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Klra9Q2TJJ8 266 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Cyp11b1Q3TG86 501 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Pdlim7Q3TJD7 457 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Capn13Q3UW68 665 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Fndc3bQ6NWW9 1207 aaKnown RBP11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Acot11Q8VHQ9 594 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Tas1r3Q925D8 858 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Fam111aQ9D2L9 613 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Cse1lQ9ERK4 971 aaKnown RBP11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Pappa2E9PZ87 1789 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Znhit6Q3UFB2 460 aaKnown RBP11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Sh3gl1Q62419 368 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 BrdtQ91Y44 956 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Rrp1bQ91YK2 724 aaKnown RBP11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Polr3fQ921X6 316 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Tmem132aQ922P8 1018 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Gtpbp4Q99ME9 634 aaKnown RBP11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 RptorQ8K4Q0 1335 aa11.8□□□□□ -0.52
Lig3-210ENSMUST00000173347 Dync1i1O88485 628 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 MafbP54841 323 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Acot6Q32Q92 419 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Sh2d1b2Q45HK4 132 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 3830417A13RikQ8BQJ2 303 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Slc13a4Q8BZ82 625 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Vwa5aQ99KC8 793 aaKnown RBP11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Emc2Q9CRD2 297 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Trim10Q9WUH5 489 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Mtmr1Q9Z2C4 669 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Zfp408H7BX78 710 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Lrrc4bP0C192 709 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 GcP21614 476 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Mov10P23249 1004 aaKnown RBP11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Six2Q62232 296 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Fmnl3Q6ZPF4 1028 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Ttc7aQ8BGB2 858 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Lrrc24Q8BHA1 521 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Tmem161bQ8C2L6 487 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Prpf40aQ9R1C7 953 aaKnown RBP11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 RenbpP82343 430 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Tcp11Q01755 566 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Ece1Q4PZA2 769 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Ccdc169Q8BXX9 214 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Sar1bQ9CQC9 198 aa11.79□□□□□ -0.52
Lig3-210ENSMUST00000173347 Nck2O55033 380 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Slc3a2P10852 526 aaKnown RBP11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Tmem63bQ3TWI9 832 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Olfm4Q3UZZ4 505 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Fam214aQ69ZK7 1075 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Rapgef5Q8C0Q9 814 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 PpatQ8CIH9 517 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Zcchc18Q8VD24 393 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Ggps1Q9WTN0 300 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Prl6a1O35257 230 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Gjb6P70689 261 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Pou2f2Q00196 463 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Ankrd13cQ3UX43 541 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Mapk6Q61532 720 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Lin9Q8C735 542 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 EpgnQ924X1 152 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Mxra8Q9DBV4 442 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Sertad2Q9JJG5 309 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Bub1bQ9Z1S0 1052 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Gm4841E9QAA8 417 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Gm1758F6VZZ1 202 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Snx12O70493 165 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 Casp7P97864 303 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 ItpripQ3TNL8 555 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 R3hdm4Q4VBF2 262 aa11.78□□□□□ -0.52
Lig3-210ENSMUST00000173347 A1cfQ5YD48 595 aa11.78□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms