RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Grb14Q9JLM9 538 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 CtsfQ9R013 462 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Nr1h3Q9Z0Y9 445 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Gm11985A0A1B0GS61 206 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Chrna1P04756 457 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 PrkceP16054 737 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 PklrP53657 574 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Plpp4Q0VBU9 271 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Cyb5r4Q3TDX8 528 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Tatdn3Q3U1C6 294 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Zscan4fQ3URS2 506 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Prdm6Q3UZD5 596 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Lrrc36Q3V0M2 755 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Olfml2bQ3V1G4 746 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Znf652Q5DU09 608 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Vwa2Q70UZ7 791 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Suz12Q80U70 741 aaKnown RBP9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Tbc1d22bQ80VE5 505 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 F13a1Q8BH61 732 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Znf473Q8BI67 892 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Tmem220Q8BP07 167 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Serpina3bQ8BYY9 420 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Kremen2Q8K1S7 461 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Tm4sf5Q91XF2 196 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 SdhbQ9CQA3 282 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Retreg3Q9CQV4 466 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Etnk1Q9D4V0 363 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Spatc1lQ9D9W0 342 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Arpp21Q9DCB4 807 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 SetQ9EQU5 289 aaKnown RBP9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 Crim1Q9JLL0 1037 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 ThadaA8C756 1938 aa9.09□□□□□ -0.95
Trim40-203ENSMUST00000172711 SpegQ62407 3262 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Ttll8A4Q9F1 832 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 MafgO54790 162 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Itgb1P09055 798 aaKnown RBP9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 PdgfbP31240 241 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Gjb4Q02738 266 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Lrrfip1Q3UZ39 729 aaKnown RBP9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Trpc6Q61143 930 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Prr18Q6PAN7 307 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Tmc3Q7TQ69 1130 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 AtripQ8BMG1 785 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 FntbQ8K2I1 437 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Fam129bQ8R1F1 749 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Znf445Q8R2V3 986 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Slc25a38Q91XD8 326 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Tas1r3Q925D8 858 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 QpctQ9CYK2 362 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Tube1Q9D6T1 475 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 KnstrnQ9D9Z1 312 aaKnown RBP9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Tfcp2Q9ERA0 502 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Eif4enif1Q9EST3 983 aaKnown RBP9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 GdaQ9R111 454 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Akt3Q9WUA6 479 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Myo5aQ99104 1853 aaKnown RBP9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 KcpQ3U492 1550 aa9.08□□□□□ -0.96
Trim40-203ENSMUST00000172711 Abcb11Q9QY30 1321 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Kcnt2D3Z649 1135 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Angpt1O08538 498 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Clk2O35491 499 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Mmp3P28862 477 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Snx27Q3UHD6 539 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Dph1Q5NCQ5 438 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Bcar1Q61140 874 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 IgflQ6B9Z0 140 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Gemin4Q6P6L6 1058 aaKnown RBP9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Fhod1Q6P9Q4 1197 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 PoliQ6R3M4 717 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Celf6Q7TN33 460 aaKnown RBP9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Nsun6Q7TS68 476 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Nxf7Q80SZ6 620 aaKnown RBP9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Cyth4Q80YW0 393 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Tmem117Q8BH18 514 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Smoc1Q8BLY1 463 aaKnown RBP9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Kif2bQ8C0N1 668 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Art3Q8R2G4 371 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Fuca2Q99KR8 461 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Chst12Q99LL3 419 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Mdm1Q9D067 708 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Nr2e3Q9QXZ7 395 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Mtmr1Q9Z2C4 669 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Plxna3P70208 1872 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 CluhQ5SW19 1315 aa9.07□□□□□ -0.96
Trim40-203ENSMUST00000172711 Wdfy3Q6VNB8 3508 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Ccdc173A0JLY1 547 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Gm6583E9Q8Z1 469 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Gna11P21278 359 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Dlg3P70175 849 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Rit2P70425 217 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Irf3P70671 419 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Casp7P97864 303 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Slc9a2Q3ZAS0 814 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Gas7Q60780 421 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 B4galnt3Q6L8S8 986 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Ercc6lQ8BHK9 1240 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Lrrc66Q8K0B3 872 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 MiosQ8VE19 875 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Ccdc47Q9D024 483 aaKnown RBP9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Armc9Q9D2I5 817 aa9.06□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms