RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Plekhm3Q8BM47 761 aa9.91□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Btbd6Q8K2J9 488 aa9.91□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Prpf6Q91YR7 941 aaKnown RBP9.91□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Rgs10Q9CQE5 181 aa9.91□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Psmd9Q9CR00 222 aa9.91□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Atp5hQ9DCX2 161 aa9.91□□□□□ -0.82
Col6a5-201ENSMUST00000165165 CenpkQ9ESN5 271 aa9.91□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Serpinb3cA2RSF9 386 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Zfp788E9Q980 884 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Gm8298J3QPI0 401 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Spata18Q0P557 537 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Best2Q8BGM5 508 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 N4bp3Q8C7U1 537 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Map3k21Q8VDG6 1002 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Tex44Q9DA60 530 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Gm3252E9PUT9 216 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Gm2956E9PVJ0 216 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Gm3002E9PW72 216 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Gm3468E9QAJ8 216 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Gm8108K7N734 216 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Gm3739L7N296 216 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Gm3164L7N2B9 238 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Gm3488M0QW81 238 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Prl3d1P18121 224 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Nol4P60954 483 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Rps6P62754 249 aaKnown RBP9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Fnbp1Q80TY0 616 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Kat6aQ8BZ21 2003 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 R3hdm1E9Q9Q2 1135 aaKnown RBP9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 C1dO35473 141 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 KitP05532 979 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Vav2Q60992 868 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Armc12Q80X86 340 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Arfip2Q8K221 341 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Gm8926L7MUE8 181 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Elac2Q80Y81 831 aaKnown RBP9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Dnm3Q8BZ98 863 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Znf445Q8R2V3 986 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Bbs2Q9CWF6 721 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Dbndd1Q9CZ00 160 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Myo1cQ9WTI7 1063 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Tmem245B1AZA5 876 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Apba1B2RUJ5 842 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Gm20425E9Q035 978 aaKnown RBP9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Zfp277E9Q6D6 583 aaKnown RBP9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Atn1O35126 1175 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 P4hbP09103 509 aaKnown RBP9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Fam167bP17257 162 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Atp9bP98195 1146 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Edem3Q2HXL6 931 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 McuQ3UMR5 350 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Ifnl2Q4VK74 193 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Spata4Q8K3V1 295 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Timm50Q9D880 353 aa9.9□□□□□ -0.82
Col6a5-201ENSMUST00000165165 GmncQ3URY2 333 aa9.9□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Pla2g4cQ64GA5 597 aa9.9□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Aggf1Q7TN31 711 aa9.9□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ripor2Q80U16 1078 aa9.9□□□□□ -0.83
Col6a5-201ENSMUST00000165165 AarsQ8BGQ7 968 aa9.9□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ttc22Q8C159 568 aa9.9□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Mrpl47Q8K2Y7 252 aa9.9□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Pdcd10Q8VE70 212 aa9.9□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Arhgef3Q91X46 524 aa9.9□□□□□ -0.83
Col6a5-201ENSMUST00000165165 1700016D06RikQ9DAA5 166 aa9.9□□□□□ -0.83
Col6a5-201ENSMUST00000165165 C1qtnf1Q9QXP7 281 aa9.9□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Thoc2B1AZI6 1594 aaKnown RBP9.9□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Zc3hav1Q3UPF5 946 aaKnown RBP9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ccdc85aQ5SP85 500 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Zhx3Q8C0Q2 951 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 HibchQ8QZS1 385 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Vps39Q8R5L3 886 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Snf8Q9CZ28 258 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Cmtm5Q9D6G9 156 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Frmpd4A2AFR3 1320 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 WizO88286 1684 aaKnown RBP9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Glt1d1A4FUP9 346 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Kcna2P63141 499 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Gpbp1l1Q6NZP2 473 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Dna2Q6ZQJ5 1062 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Catsper3Q80W99 395 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Trpv3Q8K424 791 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ushbp1Q8R370 680 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 PpidQ9CR16 370 aaKnown RBP9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 4932429P05RikA2ADI4 785 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Serpina1bP22599 413 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ptk2P34152 1090 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Mbl1P39039 239 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 CstaP56567 97 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 1700013D24RikQ0P521 120 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ddx17Q501J6 650 aaKnown RBP9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Rundc3bQ6PDC0 408 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 EmsyQ8BMB0 1264 aaKnown RBP9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 PlvapQ91VC4 438 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 4921524L21RikQ9D5T2 438 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 PygmQ9WUB3 842 aaKnown RBP9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 CenpaO35216 134 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Atxn10P28658 475 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Runx2Q08775 607 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Nlrp9aQ66X03 949 aa9.89□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Vipas39Q8BGQ1 491 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms