RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Rad51bO35719 350 aa19.9■□□□□ 0.78
Trim47-202ENSMUST00000106441 Akr1b1P45376 316 aa19.9■□□□□ 0.78
Trim47-202ENSMUST00000106441 Nlrp4cQ3TKR3 982 aa19.9■□□□□ 0.78
Trim47-202ENSMUST00000106441 Tmprss11aQ3UQ41 389 aa19.9■□□□□ 0.78
Trim47-202ENSMUST00000106441 Churc1Q6DG52 112 aa19.9■□□□□ 0.78
Trim47-202ENSMUST00000106441 Serpinb13Q8CDC0 389 aa19.9■□□□□ 0.78
Trim47-202ENSMUST00000106441 Ctage5Q8R311 779 aa19.9■□□□□ 0.78
Trim47-202ENSMUST00000106441 Calml4Q91WQ9 153 aa19.9■□□□□ 0.78
Trim47-202ENSMUST00000106441 Bco2Q99NF1 532 aa19.9■□□□□ 0.78
Trim47-202ENSMUST00000106441 Fmnl1Q9JL26 1094 aa19.9■□□□□ 0.78
Trim47-202ENSMUST00000106441 Ttc38A3KMP2 465 aa19.89■□□□□ 0.77
Trim47-202ENSMUST00000106441 Vmn2r78K7N6U5 853 aa19.89■□□□□ 0.77
Trim47-202ENSMUST00000106441 Kcnh2O35219 1162 aa19.89■□□□□ 0.77
Trim47-202ENSMUST00000106441 Rps6ka1P18653 724 aa19.89■□□□□ 0.77
Trim47-202ENSMUST00000106441 Ddr1Q03146 911 aa19.89■□□□□ 0.77
Trim47-202ENSMUST00000106441 Lrig2Q52KR2 1054 aa19.89■□□□□ 0.77
Trim47-202ENSMUST00000106441 Asap3Q5U464 904 aa19.89■□□□□ 0.77
Trim47-202ENSMUST00000106441 A1cfQ5YD48 595 aa19.89■□□□□ 0.77
Trim47-202ENSMUST00000106441 Sycp1Q62209 993 aa19.89■□□□□ 0.77
Trim47-202ENSMUST00000106441 KaznQ69ZS8 779 aa19.89■□□□□ 0.77
Trim47-202ENSMUST00000106441 Ttc22Q8C159 568 aa19.89■□□□□ 0.77
Trim47-202ENSMUST00000106441 Parp10Q8CIE4 960 aa19.89■□□□□ 0.77
Trim47-202ENSMUST00000106441 Creb3l3Q91XE9 479 aa19.89■□□□□ 0.77
Trim47-202ENSMUST00000106441 Gm15448F6PZL4 682 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Cd44P15379 778 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Hoxc10P31257 342 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Nf2P46662 596 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Cyp2e1Q05421 493 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Rsad1Q5SUV1 442 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Tlr11Q6R5P0 926 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Supt20hQ7TT00 530 aaKnown RBP19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Bola2Q8BGS2 86 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Gle1Q8R322 699 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Ube2sQ921J4 223 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Rnf34Q99KR6 376 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Ndufab1Q9CR21 156 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Ddx47Q9CWX9 455 aaKnown RBP19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Vav3Q9R0C8 847 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Mroh8E9PYI4 1049 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 B020004C17RikJ3QP07 232 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Pcdha4O88689 947 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Nedd1P33215 660 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Ighmbp2P40694 993 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Skap2Q3UND0 358 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Fam183bQ5NC57 135 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 NfrkbQ6PIJ4 1296 aaKnown RBP19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Iws1Q8C1D8 766 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Csgalnact2Q8C1F4 542 aa19.88■□□□□ 0.77
Trim47-202ENSMUST00000106441 Gm28510A0A087WP28 240 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Hspa9P38647 679 aaKnown RBP19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Dpcr1Q3TNW5 500 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Pacsin1Q61644 441 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Mcf2lQ64096 1149 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Pgrmc2Q80UU9 217 aaKnown RBP19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 DnerQ8JZM4 737 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Kiaa1024Q8K3V7 917 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 IntS13Q8QZV7 732 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Anapc4Q91W96 807 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 NapaQ9DB05 295 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Slc40a1Q9JHI9 570 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Ttll10A4Q9F3 704 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 EporP14753 507 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Usp4P35123 962 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Nr2f2P43135 414 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Fbln1Q08879 705 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Rgs9bpQ148R9 237 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Nlrp2Q4PLS0 1046 aaKnown RBP19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Sin3bQ62141 1098 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Rab11fip4Q8BQP8 635 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Senp7Q8BUH8 1037 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Il17cQ8K4C5 194 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Rpap2Q8VC34 614 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 DaglbQ91WC9 669 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 KynuQ9CXF0 464 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Tmx2Q9D710 295 aaKnown RBP19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Dydc1Q9D9T0 175 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Cul1Q9WTX6 776 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 Slc12a7Q9WVL3 1083 aa19.87■□□□□ 0.77
Trim47-202ENSMUST00000106441 C87977A2A958 498 aa19.86■□□□□ 0.77
Trim47-202ENSMUST00000106441 Mmp15O54732 657 aa19.86■□□□□ 0.77
Trim47-202ENSMUST00000106441 PrphP15331 475 aa19.86■□□□□ 0.77
Trim47-202ENSMUST00000106441 Phf8Q80TJ7 1023 aa19.86■□□□□ 0.77
Trim47-202ENSMUST00000106441 Rassf2Q8BMS9 326 aa19.86■□□□□ 0.77
Trim47-202ENSMUST00000106441 Ces1Q8VCC2 565 aa19.86■□□□□ 0.77
Trim47-202ENSMUST00000106441 Rnf181Q9CY62 165 aa19.86■□□□□ 0.77
Trim47-202ENSMUST00000106441 Disp2Q8CIP5 1345 aa19.86■□□□□ 0.77
Trim47-202ENSMUST00000106441 Trappc11B2RXC1 1133 aa19.85■□□□□ 0.77
Trim47-202ENSMUST00000106441 Mpp3O88910 568 aa19.85■□□□□ 0.77
Trim47-202ENSMUST00000106441 VegfbP49766 207 aa19.85■□□□□ 0.77
Trim47-202ENSMUST00000106441 Map4k1P70218 827 aa19.85■□□□□ 0.77
Trim47-202ENSMUST00000106441 Gba2Q69ZF3 918 aa19.85■□□□□ 0.77
Trim47-202ENSMUST00000106441 Fbxo10Q7TQF2 950 aa19.85■□□□□ 0.77
Trim47-202ENSMUST00000106441 4930550L24RikQ99PA7 320 aa19.85■□□□□ 0.77
Trim47-202ENSMUST00000106441 Mageb16Q9CWV4 363 aa19.85■□□□□ 0.77
Trim47-202ENSMUST00000106441 Esr2O08537 530 aa19.85■□□□□ 0.77
Trim47-202ENSMUST00000106441 Trim43cP86449 446 aa19.85■□□□□ 0.77
Trim47-202ENSMUST00000106441 Olfm4Q3UZZ4 505 aa19.85■□□□□ 0.77
Trim47-202ENSMUST00000106441 EsrrbQ61539 433 aa19.85■□□□□ 0.77
Trim47-202ENSMUST00000106441 Ublcp1Q8BGR9 318 aa19.85■□□□□ 0.77
Trim47-202ENSMUST00000106441 Gpr180Q8BPS4 441 aa19.85■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms