RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Capn13Q3UW68 665 aa27.2■■□□□ 1.95
Cpsf4-201ENSMUST00000070487 Cacna2d4Q5RJF7 1116 aa27.2■■□□□ 1.95
Cpsf4-201ENSMUST00000070487 Dusp11Q6NXK5 321 aaKnown RBP27.2■■□□□ 1.95
Cpsf4-201ENSMUST00000070487 Gpatch3Q8BIY1 525 aa27.2■■□□□ 1.95
Cpsf4-201ENSMUST00000070487 Sept8Q8CHH9 429 aa27.2■■□□□ 1.95
Cpsf4-201ENSMUST00000070487 March10E9PX79 788 aa27.19■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Ppp2r5aQ6PD03 486 aa27.19■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Actn1Q7TPR4 892 aaKnown RBP27.19■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Clec16aQ80U30 1036 aa27.19■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Ago3Q8CJF9 860 aa27.19■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Kiaa0391Q8JZY4 584 aaKnown RBP27.19■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Tnpo2Q99LG2 887 aaKnown RBP27.19■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Tulp1Q9Z273 543 aa27.19■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Slc23a4A0A0J9YUX7 615 aa27.19■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Apol7aB2RT54 418 aa27.19■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Gfpt1P47856 697 aa27.19■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Tcf12Q61286 706 aa27.19■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Camsap3Q80VC9 1252 aa27.19■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Akap17bA2A3V1 959 aa27.18■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Ttll8A4Q9F1 832 aa27.18■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 PtenO08586 403 aa27.18■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 IgflQ6B9Z0 140 aa27.18■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Rec8Q8C5S7 591 aa27.18■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Wfdc1Q9ESH5 211 aa27.18■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Casp8ap2Q9WUF3 1962 aa27.18■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Gm4907B1AXB9 411 aa27.17■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 1700113H08RikE9Q9Q5 327 aa27.17■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Gpr25P0C5I1 358 aa27.17■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 TdgP56581 421 aa27.17■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Msantd2Q6NZR2 559 aa27.17■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Suz12Q80U70 741 aaKnown RBP27.17■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Rbm34Q8C5L7 375 aaKnown RBP27.17■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Spred2Q924S7 410 aa27.17■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Pstpip2Q99M15 334 aa27.17■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Ppp1r3gQ9CW07 347 aa27.17■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Zbtb22Q9Z0G7 638 aa27.17■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 R3hdm1E9Q9Q2 1135 aaKnown RBP27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Cyp11b2P15539 500 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Tal1P22091 329 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Nsun7Q14AW5 724 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Pnpla5Q32LZ8 432 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Clic6Q8BHB9 596 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Sbk1Q8QZX0 417 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Slc12a9Q99MR3 914 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 GsdmeQ9Z2D3 512 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Rsph10bE9PYQ0 876 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Fmr1P35922 614 aaKnown RBP27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Dlg3P70175 849 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Fgfr4Q03142 799 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Bpifa6Q0VGU8 367 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Ano7Q14AT5 859 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Ptcd2Q8R3K3 381 aaKnown RBP27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 GhdcQ99J23 532 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Cyp2s1Q9DBX6 501 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Spock2Q9ER58 423 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Mx2Q9WVP9 655 aa27.16■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 1110002E22RikE0CYV9 1786 aa27.15■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 1700018F24RikB2RW27 314 aa27.15■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Ace3D0G895 737 aa27.15■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Vmn2r87E9PZX4 848 aa27.15■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Vmn2r78K7N6U5 853 aa27.15■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 P04214 136 aa27.15■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Pcbp1P60335 356 aaKnown RBP27.15■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Asprv1Q09PK2 339 aa27.15■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Gas2l3Q3UWW6 683 aa27.15■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 ChpfQ6IQX7 774 aa27.15■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Apol10aQ8CCA5 318 aa27.15■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Lrp2bpQ9D4C6 346 aa27.15■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Pkd2l2Q9JLG4 621 aa27.15■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Cyp4a29A0A087WPC3 509 aa27.14■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 AurkbO70126 345 aa27.14■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 SsbP32067 415 aaKnown RBP27.14■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Yap1P46938 488 aa27.14■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 DeptorQ570Y9 409 aa27.14■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Ccdc122Q8BVN0 290 aa27.14■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Kcnv1Q8BZN2 503 aa27.14■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Agbl3Q8CDP0 1006 aa27.14■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Cacnb1Q8R3Z5 597 aa27.14■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Eml3Q8VC03 897 aa27.14■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Pls3Q99K51 630 aa27.14■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Dnajb7Q9QYI8 312 aa27.14■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Ppp2r3dQ9Z176 491 aa27.14■■□□□ 1.94
Cpsf4-201ENSMUST00000070487 Nup210lQ9D2F7 1881 aa27.14■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Ccdc152E9PX14 254 aa27.13■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 P4hbP09103 509 aaKnown RBP27.13■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Mmp3P28862 477 aa27.13■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Hexim2Q3TVI4 313 aa27.13■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Sun3Q5SS91 320 aa27.13■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Amer1Q7TS75 1132 aa27.13■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Zfp120Q8BZW4 436 aa27.13■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Fam160b1Q8CDM8 764 aa27.13■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Atp13a1Q9EPE9 1200 aaKnown RBP27.13■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Oas1fQ14AZ4 364 aa27.12■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Rsad1Q5SUV1 442 aa27.12■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Crtc1Q68ED7 630 aa27.12■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Zfp202Q8C879 641 aa27.12■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Znf467Q8JZL0 594 aa27.12■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Vwa1Q8R2Z5 415 aa27.12■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Rpap2Q8VC34 614 aa27.12■■□□□ 1.93
Cpsf4-201ENSMUST00000070487 Olfr390Q8VEZ7 311 aa27.12■■□□□ 1.93
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms