RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Myh1Q5SX40 1942 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Tgfb1i1Q62219 461 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Krt6bQ9Z331 562 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 DSCC1Q14AI0 399 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Fam160a1Q505K2 1081 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Tp53bp2Q8CG79 1128 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Angptl2Q9R045 493 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Shcbp1Q9Z179 668 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Mfsd4b4J3QNS5 503 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Mpp3O88910 568 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Tlk1Q8C0V0 766 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Pnpt1Q8K1R3 783 aaKnown RBP16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 HibadhQ99L13 335 aaKnown RBP16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ddx25Q9QY15 484 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Igf1rQ60751 1373 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 CoblQ5NBX1 1337 aaKnown RBP16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 C130060K24RikG3UWA8 416 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ifi206G3UZV2 921 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Man1a2P39098 641 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ankrd34bQ3UUF8 508 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Vav2Q60992 868 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Nr2e3Q9QXZ7 395 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Hic1Q9R1Y5 733 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Cog1Q9Z160 980 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Stat4P42228 749 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Sesn1P58006 492 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Slc12a6Q924N4 1150 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 4930513O06RikQ9D549 161 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 PalldQ9ET54 1408 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Gm7942L7N277 499 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Stag2O35638 1231 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Inf2Q0GNC1 1273 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Pcgf5Q3UK78 256 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Sec31aQ3UPL0 1230 aaKnown RBP16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Catsper3Q80W99 395 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Znf598Q80YR4 908 aaKnown RBP16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Tbc1d23Q8K0F1 684 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Gm8922F6XVS9 199 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Sept2P42208 361 aaKnown RBP16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 NfibP97863 570 aaKnown RBP16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Slc9a2Q3ZAS0 814 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ddx31Q6NZQ2 687 aaKnown RBP16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Aldh3b1Q80VQ0 468 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 PreplQ8C167 725 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Rpa3Q9CQ71 121 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Peg12Q9WVA7 283 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Kiaa1468Q148V7 1216 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Atxn7l3bQ3UD01 97 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Trmt10cQ3UFY8 414 aaKnown RBP16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Otub1Q7TQI3 271 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Stk39Q9Z1W9 556 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Gm5926E9PWJ8 236 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Nol4P60954 483 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Pdzd9Q9D9M4 266 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Apobec2Q9WV35 224 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ints4Q8CIM8 964 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Tma7Q8K003 64 aaKnown RBP16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ppp1r16bQ8VHQ3 568 aa16.66■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Gm10250G3X9L6 160 aaKnown RBP16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Stambpl1Q76N33 436 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Atp5f1Q9CQQ7 256 aaKnown RBP16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Atp5hQ9DCX2 161 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Usp42B2RQC2 1324 aaKnown RBP16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Bcap31Q61335 245 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Gm5622Q810Q0 167 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Gmeb1Q9JL60 562 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Wdr7Q920I9 1489 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ankrd12G5E893 2041 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Adcy2Q80TL1 1090 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Gadl1Q80WP8 550 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Fam161bQ8CB59 589 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Bzw1Q9CQC6 419 aaKnown RBP16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 NbnQ9R207 751 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Psmd10Q9Z2X2 231 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Stam2O88811 523 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Rgl1Q60695 768 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ess2O70279 479 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Trap1Q9CQN1 706 aaKnown RBP16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Trim13Q9CYB0 407 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Irx5Q9JKQ4 484 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Tbk1Q9WUN2 729 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ccdc144bE9PVZ3 520 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Asap3Q5U464 904 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Krt42Q6IFX2 452 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Afap1l1Q8BZI0 768 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ano4Q8C5H1 955 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Erich5Q8K0S2 362 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ipo11Q8K2V6 975 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Thap2Q9D305 217 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Plekhg4A0A1L1SU27 1217 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Zbtb38Q3LR78 1197 aa16.65■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Trmt112Q9DCG9 125 aa16.64■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Ptk2P34152 1090 aa16.64■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Lrpap1P55302 360 aa16.64■□□□□ 0.25
Ubr3-201ENSMUST00000055758 NfkbibQ60778 359 aa16.64■□□□□ 0.25
Ubr3-201ENSMUST00000055758 PygmQ9WUB3 842 aaKnown RBP16.64■□□□□ 0.25
Ubr3-201ENSMUST00000055758 SptbP15508 2128 aa16.64■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Pde4dipQ80YT7 2224 aa16.64■□□□□ 0.25
Ubr3-201ENSMUST00000055758 1700016G14RikA0A286YCZ6 238 aa16.64■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Apol11bE9PUZ0 337 aa16.64■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms