RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Hip1Q8VD75 1029 aaKnown RBP10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Bzw1Q9CQC6 419 aaKnown RBP10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Snx2Q9CWK8 519 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Sugt1Q9CX34 336 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Rabgef1Q9JM13 491 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 ItgaeQ60677 1167 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Khdrbs1Q60749 443 aaKnown RBP10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Rnf168Q80XJ2 565 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 EmsyQ8BMB0 1264 aaKnown RBP10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Sapcd2Q9D818 391 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Abcg8Q9DBM0 673 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Tulp4Q9JIL5 1547 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Slc2a13Q3UHK1 637 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Foxn3Q499D0 457 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Zbtb39Q6PDK0 712 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Dcaf15Q6PFH3 600 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 PolrmtQ8BKF1 1207 aaKnown RBP10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Dach2Q925Q8 634 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 MajinQ9D992 256 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Cep152A2AUM9 1736 aaKnown RBP10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Uggt1Q6P5E4 1551 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Lrrc63A6H694 637 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Gm2237E9Q501 211 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Gm3591K7N6X2 186 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Trim72Q1XH17 477 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 UrgcpQ5NCI0 926 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Sgsm1Q8BPQ7 1093 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Calhm6Q8C9E8 313 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Prkab1Q9R078 270 aa10.49□□□□□ -0.73
Syne1-201ENSMUST00000041639 Nme9A0A1L1SUL6 329 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Foxred2Q3USW5 665 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 TxlngQ8BHN1 524 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Prkag2Q91WG5 566 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Tlr3Q99MB1 905 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Gm5795E9PZN8 263 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Pid1Q3UBG2 217 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Znf148Q61624 794 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Wdr91Q7TMQ7 748 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Scfd1Q8BRF7 639 aaKnown RBP10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 NemfQ8CCP0 1064 aaKnown RBP10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Add1Q9QYC0 735 aaKnown RBP10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Gm28360A0A087WR25 190 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Gm6588E9Q3K0 461 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Grem2O88273 168 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Pla2g4eQ50L42 875 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Ccdc85aQ5SP85 500 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 CpQ61147 1061 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Krt31Q61765 416 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 TbckQ8BM85 762 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Spata32Q8C5V0 334 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Med14A2ABV5 1459 aaKnown RBP10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Nccrp1G3X9C2 266 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Tlr13Q6R5N8 991 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Znf12Q7TSI0 686 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Trim65Q8BFW4 522 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Pak4Q8BTW9 593 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Trim54Q9ERP3 366 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Dot1lQ6XZL8 1540 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Kansl3A2RSY1 903 aaKnown RBP10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Orc4O88708 433 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Serpina1bP22599 413 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 RenbpP82343 430 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Ubxn10Q8BG34 277 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Strip1Q8C079 837 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Cgref1Q8R1U2 281 aa10.48□□□□□ -0.73
Syne1-201ENSMUST00000041639 Ess2O70279 479 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Cyp2e1Q05421 493 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Lmntd2Q0VET5 664 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Frmd8Q3UFK8 466 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Gpr162Q3UN16 588 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Vmn1r209Q5NC97 312 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Pspc1Q8R326 523 aaKnown RBP10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Tceal1Q921P9 165 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Kif14L0N7N1 1674 aaKnown RBP10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Plekha5E9Q6H8 1269 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Stag2O35638 1231 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Chil3O35744 398 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Ccdc33Q3ULW6 985 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Gm10392Q3V3I3 114 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Lig4Q8BTF7 911 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 PlvapQ91VC4 438 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Adi1Q99JT9 179 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Trpc4Q9QUQ5 974 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Krt17Q9QWL7 433 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Acot3Q9QYR7 432 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Slc2a5Q9WV38 501 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Arhgap23Q69ZH9 1483 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 P01734 135 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Gramd1bQ80TI0 738 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Ces1fQ91WU0 561 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 TarsQ9D0R2 722 aaKnown RBP10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Rhobtb1Q9DAK3 695 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Ifnb1P01575 182 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Ppp1r13lQ5I1X5 824 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Spire2Q8K1S6 718 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Arfip2Q8K221 341 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Snf8Q9CZ28 258 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Anapc7Q9WVM3 565 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Slc35g2D3YVE8 412 aa10.47□□□□□ -0.73
Syne1-201ENSMUST00000041639 Man1a2P39098 641 aa10.47□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms