RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Sh3gl1Q62419 368 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Krt40Q6IFX3 439 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 ThtpaQ8JZL3 224 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Pcdha4O88689 947 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Tom1l2Q5SRX1 507 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Cpa1Q7TPZ8 419 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Sgsm1Q8BPQ7 1093 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Morf4l2Q9R0Q4 288 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Eif2ak3Q9Z2B5 1114 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Mroh1E0CZ22 1640 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Thumpd3P97770 505 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Mettl14Q3UIK4 456 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 GartQ64737 1010 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Tmem132dQ76HP3 1097 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Sept9Q80UG5 583 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Snip1Q8BIZ6 383 aaKnown RBP17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 C1qtnf1Q9QXP7 281 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Hic1Q9R1Y5 733 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Fam161bQ8CB59 589 aa17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Rpa1Q8VEE4 623 aaKnown RBP17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 1700011I03RikE9PYL8 271 aa17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Dnajb6O54946 365 aa17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Krr1Q8BGA5 380 aaKnown RBP17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ppm1mQ8BU27 406 aa17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Trap1Q9CQN1 706 aaKnown RBP17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Tpd52l2Q9CYZ2 220 aaKnown RBP17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ndst4Q9EQW8 872 aa17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Sgk1Q9WVC6 431 aa17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Pgrmc1O55022 195 aa17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Celf1P28659 486 aaKnown RBP17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Stx1bP61264 288 aa17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 TbcbQ9D1E6 244 aa17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ppp1r12aQ9DBR7 1029 aaKnown RBP17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Krt24A1L317 512 aa17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Armc3A2AU72 881 aa17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Fastkd1Q6DI86 829 aa17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Pcdha5Q91Y15 934 aa17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Serbp1Q9CY58 407 aaKnown RBP17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 IdeQ9JHR7 1019 aa17.84■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Mroh8E9PYI4 1049 aa17.83■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Rasgrf1P27671 1262 aa17.83■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Meis1Q60954 390 aa17.83■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Tc2nQ91XT6 489 aa17.83■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Scnn1bQ9WU38 638 aa17.83■□□□□ 0.45
Col17a1-201ENSMUST00000026045 GsdmeQ9Z2D3 512 aa17.83■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Gm6657A0A1B0GRJ3 277 aa17.83■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Exosc10P56960 887 aaKnown RBP17.83■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Q3TTJ4 293 aa17.83■□□□□ 0.45
Col17a1-201ENSMUST00000026045 ItgadQ3V0T4 1168 aa17.83■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ddx19bQ8BZY3 494 aa17.83■□□□□ 0.45
Col17a1-201ENSMUST00000026045 NkapQ9D0F4 415 aaKnown RBP17.83■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Fyb2A2A995 729 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Trmt1Q3TX08 663 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Inpp5fQ8CDA1 1132 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Ccdc28bQ8CEG5 200 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Foxp3Q99JB6 429 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Grk2Q99MK8 689 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Ndufb9Q9CQJ8 179 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Kcnq5Q9JK45 933 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 H2-OaQ9QWV1 250 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Tsc22d3Q9Z2S7 137 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 B020011L13RikA0A087WQI7 412 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Acad12D3Z7X0 555 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Slc9a1Q61165 820 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Usp50Q6P8X6 390 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Haus7Q8BKT8 364 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Q9DAQ4 598 aa17.83■□□□□ 0.44
Col17a1-201ENSMUST00000026045 EsrraO08580 422 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Klrb1Q0ZUP1 214 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 IarsQ8BU30 1262 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Sept8Q8CHH9 429 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Cdk8Q8R3L8 464 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Chchd6Q91VN4 273 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Chek2Q9Z265 546 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Hecw2Q6I6G8 1578 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 IkbkbO88351 757 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Alppl2P24823 529 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Ttc26Q8BS45 554 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Bud13Q8R149 637 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Ugt1a6bK9J7B2 531 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Krt86P97861 486 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Tmem232Q5K6N0 675 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Ugt1a6Q64435 531 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Ugt1a7cQ6ZQM8 531 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Actn1Q7TPR4 892 aaKnown RBP17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 FtcdQ91XD4 541 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Trim59Q922Y2 403 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Ogfod1Q3U0K8 545 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Sec31aQ3UPL0 1230 aaKnown RBP17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Cyp4x1Q6A152 507 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Phf8Q80TJ7 1023 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Gtf2a1lQ8R4I4 468 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Gins2Q9D600 185 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Pi16Q9ET66 489 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Large1Q9Z1M7 756 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Kidins220E9Q9B7 1793 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Map7d3A2AEY4 876 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Krt72Q6IME9 520 aa17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 NfrkbQ6PIJ4 1296 aaKnown RBP17.82■□□□□ 0.44
Col17a1-201ENSMUST00000026045 GypcQ78HU7 95 aa17.82■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms