RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Arhgef16Q3U5C8 713 aa13.15□□□□□ -0.3
Ldb3-201ENSMUST00000022327 Ugt1a6Q64435 531 aa13.15□□□□□ -0.3
Ldb3-201ENSMUST00000022327 Armcx2Q6A058 784 aaKnown RBP13.15□□□□□ -0.3
Ldb3-201ENSMUST00000022327 Ugt1a7cQ6ZQM8 531 aa13.15□□□□□ -0.3
Ldb3-201ENSMUST00000022327 Sgsm1Q8BPQ7 1093 aa13.15□□□□□ -0.3
Ldb3-201ENSMUST00000022327 Kbtbd13Q8C828 458 aa13.15□□□□□ -0.3
Ldb3-201ENSMUST00000022327 Thumpd2Q9CZB3 528 aa13.15□□□□□ -0.3
Ldb3-201ENSMUST00000022327 Rnf123Q5XPI3 1314 aa13.15□□□□□ -0.3
Ldb3-201ENSMUST00000022327 MetP16056 1379 aa13.15□□□□□ -0.3
Ldb3-201ENSMUST00000022327 Lrrc63A6H694 637 aa13.15□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Stag2O35638 1231 aa13.15□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Supt20hQ7TT00 530 aaKnown RBP13.15□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Fbxo44Q8BK26 255 aa13.15□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Ero1aQ8R180 464 aa13.15□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Ska2Q9CR46 120 aa13.15□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Cpsf3Q9QXK7 684 aa13.15□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Ifnb1P01575 182 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Alox15P39654 663 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Ect2Q07139 913 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 PighQ5M9N4 188 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 UrgcpQ5NCI0 926 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Acbd5Q5XG73 508 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Ccdc154Q6RUT8 657 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Gprasp2Q8BUY8 826 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Trerf1Q8BXJ2 1205 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Yipf1Q91VU1 306 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Prkag2Q91WG5 566 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Wbp11Q923D5 641 aaKnown RBP13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Dnajc12Q9R022 198 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Adam22Q9R1V6 904 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Flt1P35969 1333 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Hspa1lP16627 641 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 HpdP49429 393 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Thumpd3P97770 505 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Ice2Q3UZ18 988 aaKnown RBP13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Tmed1Q3V009 227 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Carmil2Q3V3V9 1296 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Tbc1d1Q60949 1255 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Snx19Q6P4T1 997 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Olfr832Q7TRG9 312 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Ccdc50Q810U5 305 aaKnown RBP13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Abi1Q8CBW3 481 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Ppp1r2Q9DCL8 206 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Slc26a4Q9R155 780 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Klra10Q9R1G6 266 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 EsrrgP62509 458 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Skiv2lQ6NZR5 1244 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Sh3tc2Q80VA5 1289 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Stard7Q8R1R3 373 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Pabpc6Q9D4E6 643 aaKnown RBP13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Cd2apQ9JLQ0 637 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Prkab1Q9R078 270 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Gm43738A0A0G2JEA5 862 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Ankrd63A2ARS0 390 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Slc1a1P51906 523 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Rasa2P58069 847 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Ttf2Q5NC05 1138 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 ThrspQ62264 150 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Uba6Q8C7R4 1053 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Stap2Q8R0L1 411 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Cmtm5Q9D6G9 156 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Pck1Q9Z2V4 622 aa13.14□□□□□ -0.31
Ldb3-201ENSMUST00000022327 GsnP13020 780 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Atp11aP98197 1187 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Avpr1aQ62463 423 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Best2Q8BGM5 508 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Sept11Q8C1B7 431 aaKnown RBP13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 CenpkQ9ESN5 271 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Casq2O09161 415 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Cacnb3P54285 484 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Lrch1P62046 709 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Vsnl1P62761 191 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Vamp7P70280 220 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 StamP70297 548 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Caprin1Q60865 707 aaKnown RBP13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 EmsyQ8BMB0 1264 aaKnown RBP13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Slc7a14Q8BXR1 771 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Tmem132cQ8CEF9 1099 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 KynuQ9CXF0 464 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Ybx3Q9JKB3 361 aaKnown RBP13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Adrm1Q9JKV1 407 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Frmd7A2AD83 703 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 CpQ61147 1061 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Mtmr4Q91XS1 1190 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 RpainQ9CWY9 219 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Trim54Q9ERP3 366 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Rpf2Q9JJ80 306 aaKnown RBP13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Add1Q9QYC0 735 aaKnown RBP13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Fndc1E9Q043 1732 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Fbxl16A2RT62 479 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Fam129cD3YZB0 591 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Asprv1Q09PK2 339 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Spdye4aQ5IBH6 268 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Fam183bQ5NC57 135 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 TwistnbQ78WZ7 330 aaKnown RBP13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Akap7Q7TN79 314 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Ipo5Q8BKC5 1097 aaKnown RBP13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 SucoQ8C341 1250 aa13.13□□□□□ -0.31
Ldb3-201ENSMUST00000022327 Osbpl9A2A8Z1 736 aa13.12□□□□□ -0.31
Ldb3-201ENSMUST00000022327 6030498E09RikB1AX85 169 aa13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 6.5 ms