RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Scfd2Q8BTY8 684 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Prg3Q9JL95 222 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Uts2Q9QZQ3 123 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Zfp984A2A7A2 547 aa11.71□□□□□ -0.54
Msh3-201ENSMUST00000022220 TdgP56581 421 aa11.71□□□□□ -0.54
Msh3-201ENSMUST00000022220 Dab2P98078 766 aa11.71□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ppp1r12cQ3UMT1 782 aa11.71□□□□□ -0.54
Msh3-201ENSMUST00000022220 Oog3Q3UWY1 500 aa11.71□□□□□ -0.54
Msh3-201ENSMUST00000022220 Mapk6Q61532 720 aa11.71□□□□□ -0.54
Msh3-201ENSMUST00000022220 Siglec10Q80ZE3 688 aa11.71□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gjd4Q8BSD4 364 aa11.71□□□□□ -0.54
Msh3-201ENSMUST00000022220 WdpcpQ8C456 722 aa11.71□□□□□ -0.54
Msh3-201ENSMUST00000022220 Vcpip1Q8CDG3 1220 aa11.71□□□□□ -0.54
Msh3-201ENSMUST00000022220 Fam228aQ8CDW1 299 aa11.71□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ago4Q8CJF8 861 aa11.71□□□□□ -0.54
Msh3-201ENSMUST00000022220 Pramef12Q9D2F1 463 aa11.71□□□□□ -0.54
Msh3-201ENSMUST00000022220 H2-OaQ9QWV1 250 aa11.71□□□□□ -0.54
Msh3-201ENSMUST00000022220 A0A286YCQ6 122 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Etnk2A7MCT6 385 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Serpinb6eI7HJI3 429 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Diaph2O70566 1098 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Men1O88559 611 aaKnown RBP11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ifnar1P33896 590 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 PtgdrP70263 357 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Nsun2Q1HFZ0 757 aaKnown RBP11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Cnnm4Q69ZF7 771 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Tlr11Q6R5P0 926 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Fam49aQ8BHZ0 323 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Glis2Q8VDL9 521 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Bhmt2Q91WS4 363 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Pcdha5Q91Y15 934 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Kdm8Q9CXT6 414 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gm1661E9Q963 441 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Taf4bG5E8Z2 855 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 ArP19091 899 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Mybl1P51960 751 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Actn4P57780 912 aaKnown RBP11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Foxd4Q60688 444 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ireb2Q811J3 963 aaKnown RBP11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Rasal3Q8C2K5 1041 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Rsad2Q8CBB9 362 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gprc5cQ8K3J9 440 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Psmd2Q8VDM4 908 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Nr3c2Q8VII8 978 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ube2sQ921J4 223 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Serpinb3bQ9D1Q5 387 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Akt3Q9WUA6 479 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Apba2P98084 750 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Zfp953Q3UPV7 304 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Znf652Q5DU09 608 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Fbxw10Q5SUS0 1030 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ppp1r13bQ62415 1087 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Antxr2Q6DFX2 487 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Mettl24Q8CCB5 363 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Dcaf8Q8N7N5 591 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Kbtbd4Q8R179 534 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Lrrc42Q8R2U7 421 aa11.7□□□□□ -0.54
Msh3-201ENSMUST00000022220 Sclt1G5E861 688 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Mt-CybP00158 381 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Igfbp4P47879 254 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Zc3h18Q0P678 948 aaKnown RBP11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gspt2Q149F3 632 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Nhej1Q3KNJ2 295 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ero1aQ8R180 464 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Golga1Q9CW79 758 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 ArpinQ9D0A3 226 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Trpm3Q5F4S9 1721 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Mgat1P27808 447 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Hoxc10P31257 342 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 ItgaeQ60677 1167 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ppp2r2aQ6P1F6 447 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Klhl29Q80T74 875 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Med24Q99K74 987 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Bbs5Q9CZQ9 341 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 ThegQ9JMB1 375 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gbp2Q9Z0E6 589 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 JcadQ5DTX6 1320 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Apba1B2RUJ5 842 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 TxnP10639 105 aaKnown RBP11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 HalP35492 657 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 IvlP48997 467 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 AaasP58742 546 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Phactr4Q501J7 694 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Usp17leQ7M764 540 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Elmo3Q8BYZ7 720 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Depdc1aQ8CIG0 804 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Slc26a6Q8CIW6 758 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Pop1Q8K205 1045 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Olfr397Q8VEZ6 315 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Klra17Q9JMA4 273 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Cyth1Q9QX11 398 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Abt1Q9QYL7 269 aaKnown RBP11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gyg1Q9R062 333 aa11.69□□□□□ -0.54
Msh3-201ENSMUST00000022220 Olfr552E9Q545 317 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Becn2P0DM65 447 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Bace1P56818 501 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Rasip1Q3U0S6 961 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 ChukQ60680 745 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Sh3gl2Q62420 352 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Trpa1Q8BLA8 1125 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms