RNA–Protein interactions for RNA: YPL253C

VIK1, Transcript of Protein that forms a kinesin-14 heterodimeric motor with Kar3p, yeast

Gene VIK1, Length 1,944 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIK1	YPL253C	OPI3	P05375	206 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	ARF1	P11076	181 aa	Known RBP	0.81	□□□□□ -2.28
VIK1	YPL253C	CUP2	P15315	225 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	CPT1	P17898	393 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	SNF6	P18888	332 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	RPL16A	P26784	199 aa	Known RBP	0.81	□□□□□ -2.28
VIK1	YPL253C	MIG1	P27705	504 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	DOA1	P36037	715 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	SLM4	P38247	162 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	GGC1	P38988	300 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	PMT5	P52867	743 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	SLT2	Q00772	484 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	SMD1	Q02260	146 aa	Predicted RBP	0.81	□□□□□ -2.28
VIK1	YPL253C	MIX17	Q03667	156 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	YDR341C	Q05506	607 aa	Known RBP	0.81	□□□□□ -2.28
VIK1	YPL253C	FRE8	Q12209	686 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	AFI1	Q99222	893 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	RPL23A	P0CX41	137 aa	Known RBP	0.81	□□□□□ -2.28
VIK1	YPL253C	RPL23B	P0CX42	137 aa	Known RBP	0.81	□□□□□ -2.28
VIK1	YPL253C	SLM5	P25345	492 aa	Known RBP	0.81	□□□□□ -2.28
VIK1	YPL253C	RIM1	P32445	135 aa	Known RBP	0.81	□□□□□ -2.28
VIK1	YPL253C	TIP20	P33891	701 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	ZTA1	P38230	334 aa	Known RBP	0.81	□□□□□ -2.28
VIK1	YPL253C	YMR262W	P38430	313 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	ECM14	P38836	430 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	NOC2	P39744	710 aa	Known RBP	0.81	□□□□□ -2.28
VIK1	YPL253C	SER3	P40054	469 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	NBP1	P52919	319 aa	Predicted RBP	0.81	□□□□□ -2.28
VIK1	YPL253C	CWC22	P53333	577 aa	Known RBP	0.81	□□□□□ -2.28
VIK1	YPL253C	PRM1	P53835	661 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	NSE1	Q07913	336 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	YDL109C	Q12103	647 aa		0.81	□□□□□ -2.28
VIK1	YPL253C	SAG1	P20840	650 aa		0.8	□□□□□ -2.28
VIK1	YPL253C	MIR1	P23641	311 aa	Known RBP	0.8	□□□□□ -2.28
VIK1	YPL253C	PMT2	P31382	759 aa		0.8	□□□□□ -2.28
VIK1	YPL253C	GPD2	P41911	440 aa	Known RBP	0.8	□□□□□ -2.28
VIK1	YPL253C	AIM23	P47015	356 aa		0.8	□□□□□ -2.28
VIK1	YPL253C	NAS6	P50086	228 aa		0.8	□□□□□ -2.28
VIK1	YPL253C	BNI5	P53890	448 aa	Known RBP	0.8	□□□□□ -2.28
VIK1	YPL253C	GMC1	Q04399	608 aa		0.8	□□□□□ -2.28
VIK1	YPL253C	URC2	Q04411	772 aa		0.8	□□□□□ -2.28
VIK1	YPL253C	VPS54	Q12071	889 aa		0.8	□□□□□ -2.28
VIK1	YPL253C	HPR1	P17629	752 aa	Known RBP	0.79	□□□□□ -2.28
VIK1	YPL253C	QDR3	P38227	689 aa		0.79	□□□□□ -2.28
VIK1	YPL253C	ROG1	P53118	685 aa		0.79	□□□□□ -2.28
VIK1	YPL253C	GAS2	Q06135	555 aa		0.79	□□□□□ -2.28
VIK1	YPL253C	URA7	P28274	579 aa	Known RBP	0.79	□□□□□ -2.28
VIK1	YPL253C	YBL081W	P38180	368 aa	Known RBP	0.79	□□□□□ -2.28
VIK1	YPL253C	HSH155	P49955	971 aa	Known RBP	0.79	□□□□□ -2.28
VIK1	YPL253C	AEP3	Q12089	606 aa		0.79	□□□□□ -2.28
VIK1	YPL253C	SFI1	Q12369	946 aa		0.79	□□□□□ -2.28
VIK1	YPL253C	PRP46	Q12417	451 aa	Predicted RBP	0.79	□□□□□ -2.28
VIK1	YPL253C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.78	□□□□□ -2.28	not detected
VIK1	YPL253C	NFU1	P32860	256 aa		0.78	□□□□□ -2.28
VIK1	YPL253C	SHE4	P51534	789 aa		0.78	□□□□□ -2.28
VIK1	YPL253C	YPL113C	Q02961	396 aa		0.78	□□□□□ -2.28
VIK1	YPL253C	GTO3	Q04806	366 aa		0.78	□□□□□ -2.28
VIK1	YPL253C	GAT3	Q07928	141 aa		0.78	□□□□□ -2.28
VIK1	YPL253C	CLP1	Q08685	445 aa	Predicted RBP	0.78	□□□□□ -2.28
VIK1	YPL253C	RNA1	P11745	407 aa	Known RBP	0.77	□□□□□ -2.29
VIK1	YPL253C	BGL2	P15703	313 aa	Known RBP	0.77	□□□□□ -2.29
VIK1	YPL253C	ERV1	P27882	189 aa		0.77	□□□□□ -2.29
VIK1	YPL253C	YKR032W	P36127	104 aa		0.77	□□□□□ -2.29
VIK1	YPL253C	SMC2	P38989	1170 aa	Known RBP	0.77	□□□□□ -2.29
VIK1	YPL253C	LSM5	P40089	93 aa	Known RBP	0.77	□□□□□ -2.29
VIK1	YPL253C	EFM3	P47163	339 aa		0.77	□□□□□ -2.29
VIK1	YPL253C	ERO1	Q03103	563 aa		0.77	□□□□□ -2.29
VIK1	YPL253C	RLP24	Q07915	199 aa	Known RBP	0.77	□□□□□ -2.29
VIK1	YPL253C	BYE1	P36106	594 aa		0.77	□□□□□ -2.29
VIK1	YPL253C	PAC11	P40960	533 aa		0.77	□□□□□ -2.29
VIK1	YPL253C	YLR456W	Q06199	204 aa		0.77	□□□□□ -2.29
VIK1	YPL253C	CDD1	Q06549	142 aa		0.77	□□□□□ -2.29
VIK1	YPL253C	MMT2	Q08970	484 aa		0.77	□□□□□ -2.29
VIK1	YPL253C	YDR018C	Q12185	396 aa		0.77	□□□□□ -2.29
VIK1	YPL253C	TDH2	P00358	332 aa	Known RBP	0.76	□□□□□ -2.29
VIK1	YPL253C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.76	□□□□□ -2.29	not detected
VIK1	YPL253C	RPS14A	P06367	137 aa	Known RBP	0.76	□□□□□ -2.29
VIK1	YPL253C	MET2	P08465	486 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	DAL81	P21657	970 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	YSC83	P32792	385 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	RPS14B	P39516	138 aa	Known RBP	0.76	□□□□□ -2.29
VIK1	YPL253C	NDE1	P40215	560 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	MNN5	P46982	586 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	SCS7	Q03529	384 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	UTP15	Q04305	513 aa	Known RBP	0.76	□□□□□ -2.29
VIK1	YPL253C	YLR287C	Q05881	355 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	ECM19	Q06011	112 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	ADK2	P26364	225 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	PHO91	P27514	894 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	RPB9	P27999	122 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	YKR015C	P36111	568 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	FAD1	P38913	306 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	YLH47	Q06493	454 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	DIB1	Q06819	143 aa	Predicted RBP	0.76	□□□□□ -2.29
VIK1	YPL253C	NOP6	Q07623	225 aa	Known RBP	0.76	□□□□□ -2.29
VIK1	YPL253C	PLB3	Q08108	686 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	YPR063C	Q12160	140 aa		0.76	□□□□□ -2.29
VIK1	YPL253C	RRP7	P25368	297 aa	Predicted RBP	0.75	□□□□□ -2.29
VIK1	YPL253C	SSE1	P32589	693 aa	Known RBP	0.75	□□□□□ -2.29
VIK1	YPL253C	TAE1	P38340	232 aa		0.75	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms