RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C MPS2P53159 387 aa2.8□□□□□ -1.96
CUP9YPL177C PRP38Q00723 242 aaPredicted RBP2.8□□□□□ -1.96
CUP9YPL177C SMP3Q04174 516 aa2.8□□□□□ -1.96
CUP9YPL177C DBP9Q06218 594 aaKnown RBP2.8□□□□□ -1.96
CUP9YPL177C YLR177WQ06251 628 aa2.8□□□□□ -1.96
CUP9YPL177C PML1Q07930 204 aaPredicted RBP2.8□□□□□ -1.96
CUP9YPL177C YOL075CQ08234 1294 aa2.8□□□□□ -1.96
CUP9YPL177C YOR376WQ08900 122 aa2.8□□□□□ -1.96
CUP9YPL177C YDL109CQ12103 647 aa2.8□□□□□ -1.96
CUP9YPL177C HMS1Q12398 434 aa2.8□□□□□ -1.96
CUP9YPL177C PSK1P31374 1356 aa2.79□□□□□ -1.96
CUP9YPL177C ADH1P00330 348 aaKnown RBP2.79□□□□□ -1.96
CUP9YPL177C HEM4P06174 275 aa2.79□□□□□ -1.96
CUP9YPL177C RPS14AP06367 137 aaKnown RBP2.79□□□□□ -1.96
CUP9YPL177C SAG1P20840 650 aa2.79□□□□□ -1.96
CUP9YPL177C FAR1P21268 830 aa2.79□□□□□ -1.96
CUP9YPL177C RDS1P25611 832 aa2.79□□□□□ -1.96
CUP9YPL177C DEP1P31385 405 aa2.79□□□□□ -1.96
CUP9YPL177C EFB1P32471 206 aaKnown RBP2.79□□□□□ -1.96
CUP9YPL177C ZUO1P32527 433 aaKnown RBP2.79□□□□□ -1.96
CUP9YPL177C ATG7P38862 630 aa2.79□□□□□ -1.96
CUP9YPL177C RPS14BP39516 138 aaKnown RBP2.79□□□□□ -1.96
CUP9YPL177C RPA34P47006 233 aaPredicted RBP2.79□□□□□ -1.96
CUP9YPL177C YJR030CP47101 745 aa2.79□□□□□ -1.96
CUP9YPL177C SEH1P53011 349 aaKnown RBP2.79□□□□□ -1.96
CUP9YPL177C YGL262WP53054 175 aa2.79□□□□□ -1.96
CUP9YPL177C YGR018CP53211 109 aa2.79□□□□□ -1.96
CUP9YPL177C AQR1P53943 586 aa2.79□□□□□ -1.96
CUP9YPL177C VAC7P53950 1165 aa2.79□□□□□ -1.96
CUP9YPL177C ATP16Q12165 160 aa2.79□□□□□ -1.96
CUP9YPL177C RPL23AP0CX41 137 aaKnown RBP2.78□□□□□ -1.96
CUP9YPL177C RPL23BP0CX42 137 aaKnown RBP2.78□□□□□ -1.96
CUP9YPL177C MAS1P10507 462 aa2.78□□□□□ -1.96
CUP9YPL177C THR4P16120 514 aaKnown RBP2.78□□□□□ -1.96
CUP9YPL177C CKI1P20485 582 aa2.78□□□□□ -1.96
CUP9YPL177C GRR1P24814 1151 aa2.78□□□□□ -1.96
CUP9YPL177C MRPL27P36526 146 aaPredicted RBP2.78□□□□□ -1.96
CUP9YPL177C SOL2P37262 315 aa2.78□□□□□ -1.96
CUP9YPL177C YHR182WP38870 785 aa2.78□□□□□ -1.96
CUP9YPL177C MKC7P53379 596 aa2.78□□□□□ -1.96
CUP9YPL177C YDR115WQ04598 105 aa2.78□□□□□ -1.96
CUP9YPL177C YMR310CQ04867 317 aaPredicted RBP2.78□□□□□ -1.96
CUP9YPL177C FSH2Q05015 223 aa2.78□□□□□ -1.96
CUP9YPL177C GLE1Q12315 538 aa2.78□□□□□ -1.96
CUP9YPL177C FOL3Q12676 427 aaPredicted RBP2.78□□□□□ -1.96
CUP9YPL177C STE7P06784 515 aa2.77□□□□□ -1.97
CUP9YPL177C PMT2P31382 759 aa2.77□□□□□ -1.97
CUP9YPL177C SEO1P39709 593 aa2.77□□□□□ -1.97
CUP9YPL177C LST7P53237 242 aa2.77□□□□□ -1.97
CUP9YPL177C SFM1Q12314 213 aa2.77□□□□□ -1.97
CUP9YPL177C YDL012CQ12489 107 aa2.77□□□□□ -1.97
CUP9YPL177C SPT7P35177 1332 aa2.76□□□□□ -1.97
CUP9YPL177C TOA1P32773 286 aa2.76□□□□□ -1.97
CUP9YPL177C PDC2P32896 925 aa2.76□□□□□ -1.97
CUP9YPL177C MID2P36027 376 aa2.76□□□□□ -1.97
CUP9YPL177C YBR241CP38142 488 aa2.76□□□□□ -1.97
CUP9YPL177C YPT35P38815 214 aaKnown RBP2.76□□□□□ -1.97
CUP9YPL177C EFM3P47163 339 aa2.76□□□□□ -1.97
CUP9YPL177C CDH1P53197 566 aa2.76□□□□□ -1.97
CUP9YPL177C VHS1Q03785 461 aa2.76□□□□□ -1.97
CUP9YPL177C NAT4Q04751 285 aa2.76□□□□□ -1.97
CUP9YPL177C ARR1Q06596 294 aa2.76□□□□□ -1.97
CUP9YPL177C SLM3Q12093 417 aa2.76□□□□□ -1.97
CUP9YPL177C PSY3Q12318 242 aa2.76□□□□□ -1.97
CUP9YPL177C CBP6P07253 162 aaPredicted RBP2.75□□□□□ -1.97
CUP9YPL177C UNG1P12887 359 aa2.75□□□□□ -1.97
CUP9YPL177C HXT2P23585 541 aa2.75□□□□□ -1.97
CUP9YPL177C MXR2P25566 168 aa2.75□□□□□ -1.97
CUP9YPL177C LDS1P31379 325 aa2.75□□□□□ -1.97
CUP9YPL177C HMX1P32339 317 aa2.75□□□□□ -1.97
CUP9YPL177C ECT1P33412 323 aa2.75□□□□□ -1.97
CUP9YPL177C MRPS5P33759 307 aa2.75□□□□□ -1.97
CUP9YPL177C YHC3P47040 408 aa2.75□□□□□ -1.97
CUP9YPL177C VHT1P53241 593 aa2.75□□□□□ -1.97
CUP9YPL177C CWC22P53333 577 aaKnown RBP2.75□□□□□ -1.97
CUP9YPL177C KTR6P54070 446 aa2.75□□□□□ -1.97
CUP9YPL177C TPS1Q00764 495 aaKnown RBP2.75□□□□□ -1.97
CUP9YPL177C YDR286CQ05530 114 aa2.75□□□□□ -1.97
CUP9YPL177C GAS2Q06135 555 aa2.75□□□□□ -1.97
CUP9YPL177C RPL21BQ12672 160 aaKnown RBP2.75□□□□□ -1.97
CUP9YPL177C NBL1Q3E7Y6 73 aa2.75□□□□□ -1.97
CUP9YPL177C UBA3Q99344 299 aa2.75□□□□□ -1.97
CUP9YPL177C TAL1P15019 335 aaKnown RBP2.74□□□□□ -1.97
CUP9YPL177C UTR1P21373 530 aa2.74□□□□□ -1.97
CUP9YPL177C MIR1P23641 311 aaKnown RBP2.74□□□□□ -1.97
CUP9YPL177C SMI1P32566 505 aa2.74□□□□□ -1.97
CUP9YPL177C COS9P36034 407 aa2.74□□□□□ -1.97
CUP9YPL177C YKR015CP36111 568 aa2.74□□□□□ -1.97
CUP9YPL177C RBG1P39729 369 aa2.74□□□□□ -1.97
CUP9YPL177C AIM23P47015 356 aa2.74□□□□□ -1.97
CUP9YPL177C YJR054WP47114 497 aa2.74□□□□□ -1.97
CUP9YPL177C BIO3P50277 480 aa2.74□□□□□ -1.97
CUP9YPL177C YGR016WP53209 190 aa2.74□□□□□ -1.97
CUP9YPL177C SLT2Q00772 484 aa2.74□□□□□ -1.97
CUP9YPL177C RPL21AQ02753 160 aaKnown RBP2.74□□□□□ -1.97
CUP9YPL177C MCH1Q07376 486 aa2.74□□□□□ -1.97
CUP9YPL177C APC5Q08683 685 aa2.74□□□□□ -1.97
CUP9YPL177C FRE8Q12209 686 aa2.74□□□□□ -1.97
CUP9YPL177C OPI1P21957 404 aa2.73□□□□□ -1.97
CUP9YPL177C MKK1P32490 508 aa2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms