RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	CCW14	O13547	238 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	PET111	P08468	800 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	PRB1	P09232	635 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	YAP1	P19880	650 aa	Known RBP	5.17	□□□□□ -1.58
CSL4	YNL232W	YCK1	P23291	538 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	ILV6	P25605	309 aa	Known RBP	5.17	□□□□□ -1.58
CSL4	YNL232W	VMA8	P32610	256 aa	Known RBP	5.17	□□□□□ -1.58
CSL4	YNL232W	GCG1	P32656	232 aa	Known RBP	5.17	□□□□□ -1.58
CSL4	YNL232W	YME1	P32795	747 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	RPS1A	P33442	255 aa	Known RBP	5.17	□□□□□ -1.58
CSL4	YNL232W	MRPS5	P33759	307 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	ETR1	P38071	380 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	PRS3	P38689	320 aa	Known RBP	5.17	□□□□□ -1.58
CSL4	YNL232W	COA1	P40452	197 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	REE1	P40893	198 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	GCD10	P41814	478 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	CCT7	P42943	550 aa	Known RBP	5.17	□□□□□ -1.58
CSL4	YNL232W	MAD3	P47074	515 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	SMX3	P54999	86 aa	Predicted RBP	5.17	□□□□□ -1.58
CSL4	YNL232W	RNY1	Q02933	434 aa	Known RBP	5.17	□□□□□ -1.58
CSL4	YNL232W	MET31	Q03081	177 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	YMR155W	Q03795	547 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	RRB1	Q04225	511 aa	Known RBP	5.17	□□□□□ -1.58
CSL4	YNL232W	RNH1	Q04740	348 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	PSF1	Q12488	208 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	RGS2	Q99188	309 aa		5.17	□□□□□ -1.58
CSL4	YNL232W	CAR2	P07991	424 aa	Known RBP	5.16	□□□□□ -1.58
CSL4	YNL232W	GAL3	P13045	520 aa		5.16	□□□□□ -1.58
CSL4	YNL232W	CTA1	P15202	515 aa		5.16	□□□□□ -1.58
CSL4	YNL232W	AAC3	P18238	307 aa		5.16	□□□□□ -1.58
CSL4	YNL232W	MCK1	P21965	375 aa	Known RBP	5.16	□□□□□ -1.58
CSL4	YNL232W	RRF1	P38771	230 aa		5.16	□□□□□ -1.58
CSL4	YNL232W	NDC80	P40460	691 aa		5.16	□□□□□ -1.58
CSL4	YNL232W	YJR039W	P47107	1121 aa		5.16	□□□□□ -1.58
CSL4	YNL232W	CDH1	P53197	566 aa		5.16	□□□□□ -1.58
CSL4	YNL232W	YNR068C	P53754	272 aa		5.16	□□□□□ -1.58
CSL4	YNL232W	YMR209C	Q03648	457 aa		5.16	□□□□□ -1.58
CSL4	YNL232W	HOF1	Q05080	669 aa		5.16	□□□□□ -1.58
CSL4	YNL232W	DET1	Q99288	334 aa	Known RBP	5.16	□□□□□ -1.58
CSL4	YNL232W	GPH1	P06738	902 aa	Known RBP	5.15	□□□□□ -1.59
CSL4	YNL232W	BAR1	P12630	587 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	NCP1	P16603	691 aa	Known RBP	5.15	□□□□□ -1.59
CSL4	YNL232W	AIM17	P23180	465 aa	Known RBP	5.15	□□□□□ -1.59
CSL4	YNL232W	DMC1	P25453	334 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	COX13	P32799	129 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	SPO23	P33757	523 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	SET3	P36124	751 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	ATG7	P38862	630 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	REV7	P38927	245 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	SSP120	P39931	234 aa	Known RBP	5.15	□□□□□ -1.59
CSL4	YNL232W	RSP5	P39940	809 aa	Known RBP	5.15	□□□□□ -1.59
CSL4	YNL232W	ALG5	P40350	334 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	AVT7	P40501	490 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	AXL1	P40851	1208 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	PSA1	P41940	361 aa	Known RBP	5.15	□□□□□ -1.59
CSL4	YNL232W	DAM1	P53267	343 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	RHO4	Q00246	291 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	TAF11	Q04226	346 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	YMR111C	Q04461	462 aa	Predicted RBP	5.15	□□□□□ -1.59
CSL4	YNL232W	SML1	Q04964	104 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	COS7	Q07788	383 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	YKL033W-A	Q86ZR7	236 aa		5.15	□□□□□ -1.59
CSL4	YNL232W	ADE5,7	P07244	802 aa	Known RBP	5.14	□□□□□ -1.59
CSL4	YNL232W	DST1	P07273	309 aa		5.14	□□□□□ -1.59
CSL4	YNL232W	CBS2	P14905	389 aa		5.14	□□□□□ -1.59
CSL4	YNL232W	RPB5	P20434	215 aa		5.14	□□□□□ -1.59
CSL4	YNL232W	PTP2	P29461	750 aa		5.14	□□□□□ -1.59
CSL4	YNL232W	PHA2	P32452	334 aa		5.14	□□□□□ -1.59
CSL4	YNL232W	RPC37	P36121	282 aa		5.14	□□□□□ -1.59
CSL4	YNL232W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
CSL4	YNL232W	POP2	P39008	433 aa		5.14	□□□□□ -1.59
CSL4	YNL232W	APT1	P49435	187 aa	Known RBP	5.14	□□□□□ -1.59
CSL4	YNL232W	RNR4	P49723	345 aa	Known RBP	5.14	□□□□□ -1.59
CSL4	YNL232W	AIF1	P52923	378 aa		5.14	□□□□□ -1.59
CSL4	YNL232W	ASI1	P54074	624 aa		5.14	□□□□□ -1.59
CSL4	YNL232W	UGO1	Q03327	502 aa		5.14	□□□□□ -1.59
CSL4	YNL232W	ERB1	Q04660	807 aa	Known RBP	5.14	□□□□□ -1.59
CSL4	YNL232W	RAF1	Q06891	181 aa		5.14	□□□□□ -1.59
CSL4	YNL232W	GET4	Q12125	312 aa		5.14	□□□□□ -1.59
CSL4	YNL232W	TAF3	Q12297	353 aa		5.14	□□□□□ -1.59
CSL4	YNL232W	SPO24	Q3E752	67 aa		5.14	□□□□□ -1.59
CSL4	YNL232W	YBR182C-A	Q8TGU6	64 aa		5.14	□□□□□ -1.59
CSL4	YNL232W	AIM2	P39721	246 aa		5.13	□□□□□ -1.59
CSL4	YNL232W	YER010C	P40011	234 aa		5.13	□□□□□ -1.59
CSL4	YNL232W	PEP8	P40335	379 aa		5.13	□□□□□ -1.59
CSL4	YNL232W	INA22	P40576	216 aa		5.13	□□□□□ -1.59
CSL4	YNL232W	GDS1	P41913	522 aa		5.13	□□□□□ -1.59
CSL4	YNL232W	YNL320W	P42840	284 aa		5.13	□□□□□ -1.59
CSL4	YNL232W	AIM22	P47051	409 aa		5.13	□□□□□ -1.59
CSL4	YNL232W	BNA1	P47096	177 aa		5.13	□□□□□ -1.59
CSL4	YNL232W	MTR3	P48240	250 aa	Predicted RBP	5.13	□□□□□ -1.59
CSL4	YNL232W	MSY1	P48527	492 aa		5.13	□□□□□ -1.59
CSL4	YNL232W	YDR249C	Q03787	373 aa		5.13	□□□□□ -1.59
CSL4	YNL232W	YDR286C	Q05530	114 aa		5.13	□□□□□ -1.59
CSL4	YNL232W	SEC10	Q06245	871 aa		5.13	□□□□□ -1.59
CSL4	YNL232W	FDH1	Q08911	376 aa		5.13	□□□□□ -1.59
CSL4	YNL232W	SCM3	Q12334	223 aa		5.13	□□□□□ -1.59
CSL4	YNL232W	POL4	P25615	582 aa		5.12	□□□□□ -1.59
CSL4	YNL232W	MCM10	P32354	571 aa		5.12	□□□□□ -1.59
CSL4	YNL232W	YCR087C-A	P37263	153 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms