RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W RAD23P32628 398 aaKnown RBP1.87□□□□□ -2.11
DDR48YMR173W YSC83P32792 385 aa1.87□□□□□ -2.11
DDR48YMR173W SRB2P34162 210 aa1.87□□□□□ -2.11
DDR48YMR173W VEL1P53058 206 aa1.87□□□□□ -2.11
DDR48YMR173W RMI1Q02685 241 aa1.87□□□□□ -2.11
DDR48YMR173W VTI1Q04338 217 aa1.87□□□□□ -2.11
DDR48YMR173W YOR376WQ08900 122 aa1.87□□□□□ -2.11
DDR48YMR173W YDL109CQ12103 647 aa1.87□□□□□ -2.11
DDR48YMR173W AUS1Q08409 1394 aa1.86□□□□□ -2.11
DDR48YMR173W FUS3P16892 353 aaKnown RBP1.86□□□□□ -2.11
DDR48YMR173W CKA2P19454 339 aa1.86□□□□□ -2.11
DDR48YMR173W RPL16AP26784 199 aaKnown RBP1.86□□□□□ -2.11
DDR48YMR173W SPS19P32573 292 aaKnown RBP1.86□□□□□ -2.11
DDR48YMR173W WSC4P38739 605 aa1.86□□□□□ -2.11
DDR48YMR173W RRT13P40042 185 aa1.86□□□□□ -2.11
DDR48YMR173W ZIM17P42844 174 aa1.86□□□□□ -2.11
DDR48YMR173W COS4P43542 379 aa1.86□□□□□ -2.11
DDR48YMR173W CTK3P46963 296 aaPredicted RBP1.86□□□□□ -2.11
DDR48YMR173W YJR054WP47114 497 aa1.86□□□□□ -2.11
DDR48YMR173W YMR010WQ03687 405 aa1.86□□□□□ -2.11
DDR48YMR173W LDS2Q08218 356 aa1.86□□□□□ -2.11
DDR48YMR173W MRPL8P22353 238 aa1.85□□□□□ -2.11
DDR48YMR173W AST1P35183 429 aa1.85□□□□□ -2.11
DDR48YMR173W DBP7P36120 742 aaKnown RBP1.85□□□□□ -2.11
DDR48YMR173W RBG1P39729 369 aa1.85□□□□□ -2.11
DDR48YMR173W BIO3P50277 480 aa1.85□□□□□ -2.11
DDR48YMR173W ROG1P53118 685 aa1.85□□□□□ -2.11
DDR48YMR173W INP2Q03824 705 aa1.85□□□□□ -2.11
DDR48YMR173W RPL23AP0CX41 137 aaKnown RBP1.84□□□□□ -2.11
DDR48YMR173W RPL23BP0CX42 137 aaKnown RBP1.84□□□□□ -2.11
DDR48YMR173W MIR1P23641 311 aaKnown RBP1.84□□□□□ -2.11
DDR48YMR173W CBF5P33322 483 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
DDR48YMR173W COS9P36034 407 aa1.84□□□□□ -2.11
DDR48YMR173W YKR015CP36111 568 aa1.84□□□□□ -2.11
DDR48YMR173W YBR241CP38142 488 aa1.84□□□□□ -2.11
DDR48YMR173W UFE1P41834 346 aa1.84□□□□□ -2.11
DDR48YMR173W BUD27P43573 796 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
DDR48YMR173W EFM3P47163 339 aa1.84□□□□□ -2.11
DDR48YMR173W ERO1Q03103 563 aa1.84□□□□□ -2.11
DDR48YMR173W MRX8Q05473 314 aa1.84□□□□□ -2.11
DDR48YMR173W GAT3Q07928 141 aa1.84□□□□□ -2.11
DDR48YMR173W HRT1Q08273 121 aa1.84□□□□□ -2.11
DDR48YMR173W ISA2Q12425 185 aa1.84□□□□□ -2.11
DDR48YMR173W TIP20P33891 701 aa1.83□□□□□ -2.12
DDR48YMR173W YJL144WP47009 104 aa1.83□□□□□ -2.12
DDR48YMR173W SLT2Q00772 484 aa1.83□□□□□ -2.12
DDR48YMR173W MRX11Q03079 207 aa1.83□□□□□ -2.12
DDR48YMR173W DCI1Q08558 271 aa1.83□□□□□ -2.12
DDR48YMR173W YAL067W-AQ8TGK6 75 aa1.83□□□□□ -2.12
DDR48YMR173W STE2D6VTK4 431 aa1.82□□□□□ -2.12
DDR48YMR173W PDE2P06776 526 aa1.82□□□□□ -2.12
DDR48YMR173W AIM23P47015 356 aa1.82□□□□□ -2.12
DDR48YMR173W APC4Q04601 652 aa1.82□□□□□ -2.12
DDR48YMR173W IPK1Q06667 281 aa1.82□□□□□ -2.12
DDR48YMR173W MPE1P35728 441 aaKnown RBP1.81□□□□□ -2.12
DDR48YMR173W EFM1P38732 585 aa1.81□□□□□ -2.12
DDR48YMR173W GGC1P38988 300 aa1.81□□□□□ -2.12
DDR48YMR173W STB1P42845 420 aa1.81□□□□□ -2.12
DDR48YMR173W CDH1P53197 566 aa1.81□□□□□ -2.12
DDR48YMR173W MEH1Q02205 184 aa1.81□□□□□ -2.12
DDR48YMR173W API2Q04413 109 aa1.81□□□□□ -2.12
DDR48YMR173W SMC6Q12749 1114 aa1.81□□□□□ -2.12
DDR48YMR173W SRN2Q99176 213 aa1.81□□□□□ -2.12
DDR48YMR173W PMT2P31382 759 aa1.8□□□□□ -2.12
DDR48YMR173W SSE1P32589 693 aaKnown RBP1.8□□□□□ -2.12
DDR48YMR173W VAM7P32912 316 aa1.8□□□□□ -2.12
DDR48YMR173W SRP72P38688 640 aaKnown RBP1.8□□□□□ -2.12
DDR48YMR173W NAS6P50086 228 aa1.8□□□□□ -2.12
DDR48YMR173W PRM1P53835 661 aa1.8□□□□□ -2.12
DDR48YMR173W FAR10Q06001 478 aa1.8□□□□□ -2.12
DDR48YMR173W GAS2Q06135 555 aa1.8□□□□□ -2.12
DDR48YMR173W SLM3Q12093 417 aa1.8□□□□□ -2.12
DDR48YMR173W GPM3Q12326 303 aa1.8□□□□□ -2.12
DDR48YMR173W YPR096CO13587 100 aa1.79□□□□□ -2.12
DDR48YMR173W VMA8P32610 256 aaKnown RBP1.79□□□□□ -2.12
DDR48YMR173W SKG6P32900 734 aaPredicted RBP1.79□□□□□ -2.12
DDR48YMR173W KAP104P38217 918 aaKnown RBP1.79□□□□□ -2.12
DDR48YMR173W MLH1P38920 769 aa1.79□□□□□ -2.12
DDR48YMR173W YML6P51998 286 aa1.79□□□□□ -2.12
DDR48YMR173W CIK1Q01649 594 aa1.79□□□□□ -2.12
DDR48YMR173W SCS7Q03529 384 aa1.79□□□□□ -2.12
DDR48YMR173W YLH47Q06493 454 aa1.79□□□□□ -2.12
DDR48YMR173W SHS1Q07657 551 aa1.79□□□□□ -2.12
DDR48YMR173W RPL1AP0CX43 217 aaKnown RBP1.78□□□□□ -2.12
DDR48YMR173W RPL1BP0CX44 217 aaKnown RBP1.78□□□□□ -2.12
DDR48YMR173W EFB1P32471 206 aaKnown RBP1.78□□□□□ -2.12
DDR48YMR173W YHR177WP38867 453 aa1.78□□□□□ -2.12
DDR48YMR173W YIL059CP40520 121 aa1.78□□□□□ -2.12
DDR48YMR173W GMC1Q04399 608 aa1.78□□□□□ -2.12
DDR48YMR173W ALE1Q08548 619 aa1.78□□□□□ -2.12
DDR48YMR173W SPE3Q12074 293 aaKnown RBP1.78□□□□□ -2.12
DDR48YMR173W YDR018CQ12185 396 aa1.78□□□□□ -2.12
DDR48YMR173W YOR338WQ99326 363 aa1.78□□□□□ -2.12
DDR48YMR173W CUP2P15315 225 aa1.77□□□□□ -2.13
DDR48YMR173W DAL5P15365 543 aa1.77□□□□□ -2.13
DDR48YMR173W COX10P21592 462 aa1.77□□□□□ -2.13
DDR48YMR173W PXA2P34230 853 aa1.77□□□□□ -2.13
DDR48YMR173W SDH4P37298 181 aa1.77□□□□□ -2.13
DDR48YMR173W LCP5P40079 357 aaPredicted RBP1.77□□□□□ -2.13
DDR48YMR173W MOB2P43563 287 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms