RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C YOR283WQ12040 230 aaKnown RBP3.29□□□□□ -1.88
SHH3YMR118C LCB4Q12246 624 aa3.29□□□□□ -1.88
SHH3YMR118C APC2Q12440 853 aa3.29□□□□□ -1.88
SHH3YMR118C YGL194C-AQ2V2P6 80 aa3.29□□□□□ -1.88
SHH3YMR118C YGL041W-AP0C5N3 154 aa3.28□□□□□ -1.88
SHH3YMR118C YAR066WP0CX18 203 aa3.28□□□□□ -1.88
SHH3YMR118C YHR214WP0CX19 203 aa3.28□□□□□ -1.88
SHH3YMR118C MER1P16523 270 aa3.28□□□□□ -1.88
SHH3YMR118C PHO80P20052 293 aa3.28□□□□□ -1.88
SHH3YMR118C YCK1P23291 538 aa3.28□□□□□ -1.88
SHH3YMR118C MIH1P23748 554 aa3.28□□□□□ -1.88
SHH3YMR118C HCM1P25364 564 aa3.28□□□□□ -1.88
SHH3YMR118C IDH1P28834 360 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
SHH3YMR118C MRPL9P31334 269 aa3.28□□□□□ -1.88
SHH3YMR118C ACB1P31787 87 aa3.28□□□□□ -1.88
SHH3YMR118C PDC2P32896 925 aa3.28□□□□□ -1.88
SHH3YMR118C MRPL40P36534 297 aa3.28□□□□□ -1.88
SHH3YMR118C NEM1P38757 446 aa3.28□□□□□ -1.88
SHH3YMR118C GIC1P38785 314 aa3.28□□□□□ -1.88
SHH3YMR118C GEP4P38812 185 aa3.28□□□□□ -1.88
SHH3YMR118C MBP1P39678 833 aa3.28□□□□□ -1.88
SHH3YMR118C SSO2P39926 295 aa3.28□□□□□ -1.88
SHH3YMR118C AIM10P39965 576 aaKnown RBP3.28□□□□□ -1.88
SHH3YMR118C FMP52P40008 231 aa3.28□□□□□ -1.88
SHH3YMR118C YMR144WP40214 342 aaKnown RBP3.28□□□□□ -1.88
SHH3YMR118C FMC1P40491 155 aa3.28□□□□□ -1.88
SHH3YMR118C PFS2P42841 465 aaKnown RBP3.28□□□□□ -1.88
SHH3YMR118C YGR201CP42936 225 aa3.28□□□□□ -1.88
SHH3YMR118C GAT1P43574 510 aa3.28□□□□□ -1.88
SHH3YMR118C BNA6P43619 295 aa3.28□□□□□ -1.88
SHH3YMR118C SPT20P50875 604 aa3.28□□□□□ -1.88
SHH3YMR118C CGR1P53188 120 aa3.28□□□□□ -1.88
SHH3YMR118C IMO32P53219 342 aa3.28□□□□□ -1.88
SHH3YMR118C SLI1P53304 468 aa3.28□□□□□ -1.88
SHH3YMR118C YSA1Q01976 231 aa3.28□□□□□ -1.88
SHH3YMR118C RSM28Q03430 361 aa3.28□□□□□ -1.88
SHH3YMR118C CTK1Q03957 528 aaKnown RBP3.28□□□□□ -1.88
SHH3YMR118C EMI2Q04409 500 aaKnown RBP3.28□□□□□ -1.88
SHH3YMR118C RRP45Q05636 305 aaKnown RBP3.28□□□□□ -1.88
SHH3YMR118C VID22Q05934 901 aa3.28□□□□□ -1.88
SHH3YMR118C RSC58Q07979 502 aa3.28□□□□□ -1.88
SHH3YMR118C FRE5Q08908 694 aa3.28□□□□□ -1.88
SHH3YMR118C AEP3Q12089 606 aa3.28□□□□□ -1.88
SHH3YMR118C YPL245WQ12179 454 aaKnown RBP3.28□□□□□ -1.88
SHH3YMR118C PKH2Q12236 1081 aaKnown RBP3.28□□□□□ -1.88
SHH3YMR118C RRP42Q12277 265 aaPredicted RBP3.28□□□□□ -1.88
SHH3YMR118C YOL114CQ12322 202 aa3.28□□□□□ -1.88
SHH3YMR118C MHT1Q12525 324 aa3.28□□□□□ -1.88
SHH3YMR118C SRN2Q99176 213 aa3.28□□□□□ -1.88
SHH3YMR118C YLR358CO13565 187 aa3.27□□□□□ -1.89
SHH3YMR118C YPR096CO13587 100 aa3.27□□□□□ -1.89
SHH3YMR118C COX3P00420 269 aa3.27□□□□□ -1.89
SHH3YMR118C RPS17AP02407 136 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C REP2P03872 296 aa3.27□□□□□ -1.89
SHH3YMR118C AAC1P04710 309 aa3.27□□□□□ -1.89
SHH3YMR118C HAP2P06774 265 aa3.27□□□□□ -1.89
SHH3YMR118C RPS17BP14127 136 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C FUS3P16892 353 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C ERD2P18414 219 aa3.27□□□□□ -1.89
SHH3YMR118C CKS1P20486 150 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C DAL81P21657 970 aa3.27□□□□□ -1.89
SHH3YMR118C MAG1P22134 296 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C MRPL8P22353 238 aa3.27□□□□□ -1.89
SHH3YMR118C RPS1BP23248 255 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C PRE7P23724 241 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C RNA14P25298 677 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C AHC2P25649 128 aa3.27□□□□□ -1.89
SHH3YMR118C YIM1P28625 365 aa3.27□□□□□ -1.89
SHH3YMR118C KRE6P32486 720 aa3.27□□□□□ -1.89
SHH3YMR118C SUR1P33300 382 aa3.27□□□□□ -1.89
SHH3YMR118C LHP1P33399 275 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C PRP18P33411 251 aaPredicted RBP3.27□□□□□ -1.89
SHH3YMR118C SPO23P33757 523 aa3.27□□□□□ -1.89
SHH3YMR118C WBP1P33767 430 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C PMT1P33775 817 aa3.27□□□□□ -1.89
SHH3YMR118C TMA19P35691 167 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C YKL151CP36059 337 aa3.27□□□□□ -1.89
SHH3YMR118C SHE2P36068 246 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
SHH3YMR118C ALY1P36117 915 aa3.27□□□□□ -1.89
SHH3YMR118C ASC1P38011 319 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C ATP3P38077 311 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C ZTA1P38230 334 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C YBR071WP38243 211 aa3.27□□□□□ -1.89
SHH3YMR118C COS8P38723 381 aa3.27□□□□□ -1.89
SHH3YMR118C HSE1P38753 452 aa3.27□□□□□ -1.89
SHH3YMR118C FET3P38993 636 aa3.27□□□□□ -1.89
SHH3YMR118C MSS4P38994 779 aa3.27□□□□□ -1.89
SHH3YMR118C RCY1P39531 840 aa3.27□□□□□ -1.89
SHH3YMR118C HIS6P40545 261 aa3.27□□□□□ -1.89
SHH3YMR118C UFE1P41834 346 aa3.27□□□□□ -1.89
SHH3YMR118C CAF16P43569 289 aa3.27□□□□□ -1.89
SHH3YMR118C SIP4P46954 829 aa3.27□□□□□ -1.89
SHH3YMR118C MUP1P50276 574 aa3.27□□□□□ -1.89
SHH3YMR118C EXG2P52911 562 aa3.27□□□□□ -1.89
SHH3YMR118C MAL11P53048 616 aa3.27□□□□□ -1.89
SHH3YMR118C VPS73P53142 486 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C CWC24P53769 259 aa3.27□□□□□ -1.89
SHH3YMR118C YNL034WP53963 612 aa3.27□□□□□ -1.89
SHH3YMR118C TPS1Q00764 495 aaKnown RBP3.27□□□□□ -1.89
SHH3YMR118C OAZ1Q02803 292 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms