RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W MCH1Q07376 486 aa1.8□□□□□ -2.12
SEC22YLR268W GAT3Q07928 141 aa1.8□□□□□ -2.12
SEC22YLR268W SFG1Q12507 346 aa1.8□□□□□ -2.12
SEC22YLR268W COX4P04037 155 aa1.79□□□□□ -2.12
SEC22YLR268W HEM4P06174 275 aa1.79□□□□□ -2.12
SEC22YLR268W STE7P06784 515 aa1.79□□□□□ -2.12
SEC22YLR268W RPS18AP0CX55 146 aaKnown RBP1.79□□□□□ -2.12
SEC22YLR268W RPS18BP0CX56 146 aaPredicted RBP1.79□□□□□ -2.12
SEC22YLR268W GRR1P24814 1151 aa1.79□□□□□ -2.12
SEC22YLR268W CHA1P25379 360 aaKnown RBP1.79□□□□□ -2.12
SEC22YLR268W DEP1P31385 405 aa1.79□□□□□ -2.12
SEC22YLR268W HMX1P32339 317 aa1.79□□□□□ -2.12
SEC22YLR268W YHR182WP38870 785 aa1.79□□□□□ -2.12
SEC22YLR268W CTK3P46963 296 aaPredicted RBP1.79□□□□□ -2.12
SEC22YLR268W CUE3P53137 624 aaKnown RBP1.79□□□□□ -2.12
SEC22YLR268W YGR016WP53209 190 aa1.79□□□□□ -2.12
SEC22YLR268W AQR1P53943 586 aa1.79□□□□□ -2.12
SEC22YLR268W AIM33Q04516 312 aa1.79□□□□□ -2.12
SEC22YLR268W MSC3Q05812 728 aa1.79□□□□□ -2.12
SEC22YLR268W YLH47Q06493 454 aa1.79□□□□□ -2.12
SEC22YLR268W DNL4Q08387 944 aaPredicted RBP1.79□□□□□ -2.12
SEC22YLR268W CBP6P07253 162 aaPredicted RBP1.78□□□□□ -2.12
SEC22YLR268W ZRC1P20107 442 aa1.78□□□□□ -2.12
SEC22YLR268W GIT1P25346 518 aa1.78□□□□□ -2.12
SEC22YLR268W SMI1P32566 505 aa1.78□□□□□ -2.12
SEC22YLR268W YEL043WP32618 956 aa1.78□□□□□ -2.12
SEC22YLR268W PTK1P36002 662 aaPredicted RBP1.78□□□□□ -2.12
SEC22YLR268W UIP5P36137 443 aa1.78□□□□□ -2.12
SEC22YLR268W GPI18P38211 433 aa1.78□□□□□ -2.12
SEC22YLR268W CAJ1P39101 391 aa1.78□□□□□ -2.12
SEC22YLR268W CIN2P46670 268 aa1.78□□□□□ -2.12
SEC22YLR268W YJR030CP47101 745 aa1.78□□□□□ -2.12
SEC22YLR268W EFM3P47163 339 aa1.78□□□□□ -2.12
SEC22YLR268W HST1P53685 503 aa1.78□□□□□ -2.12
SEC22YLR268W PRM1P53835 661 aa1.78□□□□□ -2.12
SEC22YLR268W PDR16P53860 351 aaKnown RBP1.78□□□□□ -2.12
SEC22YLR268W ENT5Q03769 411 aaKnown RBP1.78□□□□□ -2.12
SEC22YLR268W SMP3Q04174 516 aa1.78□□□□□ -2.12
SEC22YLR268W RRB1Q04225 511 aaKnown RBP1.78□□□□□ -2.12
SEC22YLR268W YDL109CQ12103 647 aa1.78□□□□□ -2.12
SEC22YLR268W GLE1Q12315 538 aa1.78□□□□□ -2.12
SEC22YLR268W HIF1Q12373 385 aa1.78□□□□□ -2.12
SEC22YLR268W AIM45Q12480 344 aaKnown RBP1.78□□□□□ -2.12
SEC22YLR268W YOR338WQ99326 363 aa1.78□□□□□ -2.12
SEC22YLR268W STE3P06783 470 aa1.77□□□□□ -2.13
SEC22YLR268W RPL23AP0CX41 137 aaKnown RBP1.77□□□□□ -2.13
SEC22YLR268W RPL23BP0CX42 137 aaKnown RBP1.77□□□□□ -2.13
SEC22YLR268W RPS16AP0CX51 143 aaKnown RBP1.77□□□□□ -2.13
SEC22YLR268W RPS16BP0CX52 143 aaKnown RBP1.77□□□□□ -2.13
SEC22YLR268W TAL1P15019 335 aaKnown RBP1.77□□□□□ -2.13
SEC22YLR268W CKI1P20485 582 aa1.77□□□□□ -2.13
SEC22YLR268W SAG1P20840 650 aa1.77□□□□□ -2.13
SEC22YLR268W FAR1P21268 830 aa1.77□□□□□ -2.13
SEC22YLR268W CMK2P22517 447 aa1.77□□□□□ -2.13
SEC22YLR268W LDS1P31379 325 aa1.77□□□□□ -2.13
SEC22YLR268W FMT1P32785 401 aa1.77□□□□□ -2.13
SEC22YLR268W YKR015CP36111 568 aa1.77□□□□□ -2.13
SEC22YLR268W SOL2P37262 315 aa1.77□□□□□ -2.13
SEC22YLR268W YPT35P38815 214 aaKnown RBP1.77□□□□□ -2.13
SEC22YLR268W YHR122WP38829 231 aa1.77□□□□□ -2.13
SEC22YLR268W ALD5P40047 520 aaKnown RBP1.77□□□□□ -2.13
SEC22YLR268W YIL089WP40500 205 aa1.77□□□□□ -2.13
SEC22YLR268W IGD1P43598 195 aa1.77□□□□□ -2.13
SEC22YLR268W KEG1P43614 200 aa1.77□□□□□ -2.13
SEC22YLR268W ATP22P50273 684 aaPredicted RBP1.77□□□□□ -2.13
SEC22YLR268W YPS5P53057 165 aa1.77□□□□□ -2.13
SEC22YLR268W VAC7P53950 1165 aa1.77□□□□□ -2.13
SEC22YLR268W PRP38Q00723 242 aaPredicted RBP1.77□□□□□ -2.13
SEC22YLR268W FSH2Q05015 223 aa1.77□□□□□ -2.13
SEC22YLR268W YDR286CQ05530 114 aa1.77□□□□□ -2.13
SEC22YLR268W PML1Q07930 204 aaPredicted RBP1.77□□□□□ -2.13
SEC22YLR268W PGC1Q08959 321 aa1.77□□□□□ -2.13
SEC22YLR268W SFM1Q12314 213 aa1.77□□□□□ -2.13
SEC22YLR268W PSY3Q12318 242 aa1.77□□□□□ -2.13
SEC22YLR268W YOR012WQ12351 137 aa1.77□□□□□ -2.13
SEC22YLR268W FOL3Q12676 427 aaPredicted RBP1.77□□□□□ -2.13
SEC22YLR268W DET1Q99288 334 aaKnown RBP1.77□□□□□ -2.13
SEC22YLR268W UBA3Q99344 299 aa1.77□□□□□ -2.13
SEC22YLR268W UNG1P12887 359 aa1.76□□□□□ -2.13
SEC22YLR268W TPM1P17536 199 aaKnown RBP1.76□□□□□ -2.13
SEC22YLR268W ZUO1P32527 433 aaKnown RBP1.76□□□□□ -2.13
SEC22YLR268W ANP1P32629 500 aa1.76□□□□□ -2.13
SEC22YLR268W MRPS5P33759 307 aa1.76□□□□□ -2.13
SEC22YLR268W WSC4P38739 605 aa1.76□□□□□ -2.13
SEC22YLR268W HEM14P40012 539 aa1.76□□□□□ -2.13
SEC22YLR268W YFL012WP43580 148 aa1.76□□□□□ -2.13
SEC22YLR268W YHC3P47040 408 aa1.76□□□□□ -2.13
SEC22YLR268W LST7P53237 242 aa1.76□□□□□ -2.13
SEC22YLR268W VHT1P53241 593 aa1.76□□□□□ -2.13
SEC22YLR268W TPS1Q00764 495 aaKnown RBP1.76□□□□□ -2.13
SEC22YLR268W ARR1Q06596 294 aa1.76□□□□□ -2.13
SEC22YLR268W YOL075CQ08234 1294 aa1.76□□□□□ -2.13
SEC22YLR268W APC5Q08683 685 aa1.76□□□□□ -2.13
SEC22YLR268W ATP16Q12165 160 aa1.76□□□□□ -2.13
SEC22YLR268W MCT1Q12283 360 aa1.76□□□□□ -2.13
SEC22YLR268W VMA2P16140 517 aaKnown RBP1.75□□□□□ -2.13
SEC22YLR268W ARF2P19146 181 aaKnown RBP1.75□□□□□ -2.13
SEC22YLR268W HXT2P23585 541 aa1.75□□□□□ -2.13
SEC22YLR268W MIR1P23641 311 aaKnown RBP1.75□□□□□ -2.13
SEC22YLR268W MXR2P25566 168 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms