RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PWP1	YLR196W	TPK1	P06244	397 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
PWP1	YLR196W	EXG1	P23776	448 aa	Known RBP	4.96	□□□□□ -1.62
PWP1	YLR196W	CHA1	P25379	360 aa	Known RBP	4.96	□□□□□ -1.62
PWP1	YLR196W	VBA3	P25594	458 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	FAA1	P30624	700 aa	Known RBP	4.96	□□□□□ -1.62
PWP1	YLR196W	HYM1	P32464	399 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	YKU70	P32807	602 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	DAD2	P36162	133 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	YBR013C	P38215	129 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	CST26	P38226	397 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	ELO3	P40319	345 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	TIR3	P40552	269 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	RGD2	P43556	714 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	YJL163C	P46996	555 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	YJL132W	P47014	750 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	SBH2	P52871	88 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	USE1	P53146	245 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	TEP1	P53916	434 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	HXT11	P54862	567 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	TIM8	P57744	87 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	YPL108W	Q02872	168 aa	Predicted RBP	4.96	□□□□□ -1.62
PWP1	YLR196W	MUS81	Q04149	632 aa	Predicted RBP	4.96	□□□□□ -1.62
PWP1	YLR196W	PEX30	Q06169	523 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	NUT2	Q06213	157 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	CDC73	Q06697	393 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	SCP1	Q08873	200 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	YOR283W	Q12040	230 aa	Known RBP	4.96	□□□□□ -1.62
PWP1	YLR196W	ISU2	Q12056	156 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	YPR014C	Q6B0W2	109 aa		4.96	□□□□□ -1.62
PWP1	YLR196W	CDC33	P07260	213 aa	Known RBP	4.95	□□□□□ -1.62
PWP1	YLR196W	REV1	P12689	985 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	APE2	P32454	952 aa	Known RBP	4.95	□□□□□ -1.62
PWP1	YLR196W	UPS2	P35200	230 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	YNK1	P36010	153 aa	Known RBP	4.95	□□□□□ -1.62
PWP1	YLR196W	LDH1	P38139	375 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	ZTA1	P38230	334 aa	Known RBP	4.95	□□□□□ -1.62
PWP1	YLR196W	PRP39	P39682	629 aa	Known RBP	4.95	□□□□□ -1.62
PWP1	YLR196W	UTP7	P40055	554 aa	Known RBP	4.95	□□□□□ -1.62
PWP1	YLR196W	YIL108W	P40483	696 aa	Known RBP	4.95	□□□□□ -1.62
PWP1	YLR196W	SHR5	P41912	237 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	GUF1	P46943	645 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	ALY2	P47029	1046 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	SAM37	P50110	327 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	CWC23	P52868	283 aa	Predicted RBP	4.95	□□□□□ -1.62
PWP1	YLR196W	TPN1	P53099	579 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	YPR003C	P53394	754 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	SOK2	P53438	785 aa	Predicted RBP	4.95	□□□□□ -1.62
PWP1	YLR196W	YIP3	P53633	176 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	NOG2	P53742	486 aa	Known RBP	4.95	□□□□□ -1.62
PWP1	YLR196W	EFR3	Q03653	782 aa	Known RBP	4.95	□□□□□ -1.62
PWP1	YLR196W	RIM13	Q03792	727 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	AIM36	Q03798	255 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	RKM2	Q03942	479 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	APC4	Q04601	652 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	GAL83	Q04739	417 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	NAT4	Q04751	285 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	IZH3	Q07959	543 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	GAS5	Q08193	484 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	BSC6	Q08280	497 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	YPL257W	Q08974	193 aa		4.95	□□□□□ -1.62
PWP1	YLR196W	YRA1	Q12159	226 aa	Known RBP	4.95	□□□□□ -1.62
PWP1	YLR196W	RPL31A	P0C2H8	113 aa	Known RBP	4.94	□□□□□ -1.62
PWP1	YLR196W	RPL31B	P0C2H9	113 aa	Known RBP	4.94	□□□□□ -1.62
PWP1	YLR196W	APE1	P14904	514 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	NUP1	P20676	1076 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	YCK2	P23292	546 aa	Known RBP	4.94	□□□□□ -1.62
PWP1	YLR196W	RBK1	P25332	333 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	MGT1	P26188	188 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	CDC20	P26309	610 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	ADK2	P26364	225 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	UTR4	P32626	227 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	GCS1	P35197	352 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	EFM1	P38732	585 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	YIL067C	P40514	678 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	AIM22	P47051	409 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	CSN12	P47130	423 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	YJR149W	P47177	404 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	TYW3	P53177	273 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	GND2	P53319	492 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	IDP3	P53982	420 aa	Known RBP	4.94	□□□□□ -1.62
PWP1	YLR196W	STP1	Q00947	519 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	RPA49	Q01080	415 aa	Predicted RBP	4.94	□□□□□ -1.62
PWP1	YLR196W	SNO1	Q03144	224 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	YMR226C	Q05016	267 aa	Known RBP	4.94	□□□□□ -1.62
PWP1	YLR196W	YHC1	Q05900	231 aa	Known RBP	4.94	□□□□□ -1.62
PWP1	YLR196W	YLR179C	Q06252	201 aa	Known RBP	4.94	□□□□□ -1.62
PWP1	YLR196W	FMP45	Q07651	309 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	GPM2	Q12008	311 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	POM33	Q12164	279 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	YPR1	Q12458	312 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	ATP2	P00830	511 aa	Known RBP	4.94	□□□□□ -1.62
PWP1	YLR196W	COX4	P04037	155 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	DAL2	P25335	343 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	RAD14	P28519	371 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	MCM5	P29496	775 aa	Known RBP	4.94	□□□□□ -1.62
PWP1	YLR196W	CYS3	P31373	394 aa	Known RBP	4.94	□□□□□ -1.62
PWP1	YLR196W	HOG1	P32485	435 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	SPT23	P35210	1082 aa		4.94	□□□□□ -1.62
PWP1	YLR196W	WSC4	P38739	605 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms