RNA–Protein interactions for RNA: YLR041W

YLR041W, Transcript of Dubious open reading frame, yeast

Gene YLR041W, Length 321 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR041W	YLR041W	YGR015C	P53208	328 aa		0.48	□□□□□ -2.33
YLR041W	YLR041W	COS1	P53822	381 aa		0.48	□□□□□ -2.33
YLR041W	YLR041W	RPN9	Q04062	393 aa	Known RBP	0.48	□□□□□ -2.33
YLR041W	YLR041W	API2	Q04413	109 aa		0.48	□□□□□ -2.33
YLR041W	YLR041W	ECM7	Q06200	448 aa		0.48	□□□□□ -2.33
YLR041W	YLR041W	LDS2	Q08218	356 aa		0.48	□□□□□ -2.33
YLR041W	YLR041W	MMT2	Q08970	484 aa		0.48	□□□□□ -2.33
YLR041W	YLR041W	ATP16	Q12165	160 aa		0.48	□□□□□ -2.33
YLR041W	YLR041W	RRG1	Q12167	365 aa	Predicted RBP	0.48	□□□□□ -2.33
YLR041W	YLR041W	ARO3	P14843	370 aa	Known RBP	0.47	□□□□□ -2.33
YLR041W	YLR041W	ITR2	P30606	609 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	YSC83	P32792	385 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	SRB2	P34162	210 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	YKL071W	P36086	256 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	FRM2	P37261	193 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	YBL081W	P38180	368 aa	Known RBP	0.47	□□□□□ -2.33
YLR041W	YLR041W	QDR3	P38227	689 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	SHE3	P38272	425 aa	Known RBP	0.47	□□□□□ -2.33
YLR041W	YLR041W	STN1	P38960	494 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.47	□□□□□ -2.33	not detected
YLR041W	YLR041W	YIL054W	P40524	105 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	ZIM17	P42844	174 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	COS4	P43542	379 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	CIN2	P46670	268 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	BUD13	P46947	266 aa	Predicted RBP	0.47	□□□□□ -2.33
YLR041W	YLR041W	YGL088W	P53151	121 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	TAF11	Q04226	346 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	VTI1	Q04338	217 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	RLP24	Q07915	199 aa	Known RBP	0.47	□□□□□ -2.33
YLR041W	YLR041W	DCI1	Q08558	271 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	HIF1	Q12373	385 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	ISA2	Q12425	185 aa		0.47	□□□□□ -2.33
YLR041W	YLR041W	COX3	P00420	269 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	RPL12A	P0CX53	165 aa	Known RBP	0.46	□□□□□ -2.34
YLR041W	YLR041W	RPL12B	P0CX54	165 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	CUP2	P15315	225 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	SAG1	P20840	650 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	MIR1	P23641	311 aa	Known RBP	0.46	□□□□□ -2.34
YLR041W	YLR041W	ERV1	P27882	189 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	URA10	P30402	227 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	ALK2	P32789	676 aa	Predicted RBP	0.46	□□□□□ -2.34
YLR041W	YLR041W	PEX5	P35056	612 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	YHR182W	P38870	785 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	MNL1	P38888	796 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	PAC11	P40960	533 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	YNL320W	P42840	284 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	ECO1	P43605	281 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	YJR054W	P47114	497 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	RPT4	P53549	437 aa	Known RBP	0.46	□□□□□ -2.34
YLR041W	YLR041W	BNI5	P53890	448 aa	Known RBP	0.46	□□□□□ -2.34
YLR041W	YLR041W	YPL080C	Q02826	108 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	INP1	Q03694	420 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	ERB1	Q04660	807 aa	Known RBP	0.46	□□□□□ -2.34
YLR041W	YLR041W	YDL121C	Q07541	149 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	YPR063C	Q12160	140 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	MCT1	Q12283	360 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	YOL085C	Q99345	113 aa		0.46	□□□□□ -2.34
YLR041W	YLR041W	HPR1	P17629	752 aa	Known RBP	0.45	□□□□□ -2.34
YLR041W	YLR041W	COX10	P21592	462 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	MRPL8	P22353	238 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	CHA1	P25379	360 aa	Known RBP	0.45	□□□□□ -2.34
YLR041W	YLR041W	MIG1	P27705	504 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	PMT2	P31382	759 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	MKK1	P32490	508 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	PCH2	P38126	564 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	ATG12	P38316	186 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	TAE1	P38340	232 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	ECM14	P38836	430 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	SER3	P40054	469 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	MOB2	P43563	287 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	ASN2	P49090	572 aa	Known RBP	0.45	□□□□□ -2.34
YLR041W	YLR041W	SHE4	P51534	789 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	CAX4	P53223	239 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	PRM1	P53835	661 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	YMR244W	Q04018	355 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	GMC1	Q04399	608 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	YLH47	Q06493	454 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	SHS1	Q07657	551 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	NSE1	Q07913	336 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	FRE8	Q12209	686 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	RRI2	Q12348	645 aa		0.45	□□□□□ -2.34
YLR041W	YLR041W	CPR2	P23285	205 aa		0.44	□□□□□ -2.34
YLR041W	YLR041W	RPN12	P32496	274 aa		0.44	□□□□□ -2.34
YLR041W	YLR041W	SSE1	P32589	693 aa	Known RBP	0.44	□□□□□ -2.34
YLR041W	YLR041W	JNM1	P36224	373 aa		0.44	□□□□□ -2.34
YLR041W	YLR041W	SHE1	P38200	338 aa		0.44	□□□□□ -2.34
YLR041W	YLR041W	KEG1	P43614	200 aa		0.44	□□□□□ -2.34
YLR041W	YLR041W	TOS2	P50078	622 aa		0.44	□□□□□ -2.34
YLR041W	YLR041W	YGR111W	P53265	400 aa		0.44	□□□□□ -2.34
YLR041W	YLR041W	RRN9	P53437	365 aa		0.44	□□□□□ -2.34
YLR041W	YLR041W	SED5	Q01590	340 aa		0.44	□□□□□ -2.34
YLR041W	YLR041W	SVL3	Q03088	825 aa	Known RBP	0.44	□□□□□ -2.34
YLR041W	YLR041W	RRB1	Q04225	511 aa	Known RBP	0.44	□□□□□ -2.34
YLR041W	YLR041W	CSI1	Q04368	295 aa		0.44	□□□□□ -2.34
YLR041W	YLR041W	URC2	Q04411	772 aa		0.44	□□□□□ -2.34
YLR041W	YLR041W	APC4	Q04601	652 aa		0.44	□□□□□ -2.34
YLR041W	YLR041W	YOL075C	Q08234	1294 aa		0.44	□□□□□ -2.34
YLR041W	YLR041W	AAD15	Q08361	143 aa		0.44	□□□□□ -2.34
YLR041W	YLR041W	CLP1	Q08685	445 aa	Predicted RBP	0.44	□□□□□ -2.34
YLR041W	YLR041W	RNH203	Q12338	110 aa		0.44	□□□□□ -2.34

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