RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeast

Gene RPL39, Length 156 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL39	YJL189W	SMD1	Q02260	146 aa	Predicted RBP	0.8	□□□□□ -2.28
RPL39	YJL189W	YMR155W	Q03795	547 aa		0.8	□□□□□ -2.28
RPL39	YJL189W	GTO3	Q04806	366 aa		0.8	□□□□□ -2.28
RPL39	YJL189W	AFI1	Q99222	893 aa		0.8	□□□□□ -2.28
RPL39	YJL189W	MEX67	Q99257	599 aa	Known RBP	0.8	□□□□□ -2.28
RPL39	YJL189W	RPL23A	P0CX41	137 aa	Known RBP	0.79	□□□□□ -2.28
RPL39	YJL189W	RPL23B	P0CX42	137 aa	Known RBP	0.79	□□□□□ -2.28
RPL39	YJL189W	MRP7	P12687	371 aa		0.79	□□□□□ -2.28
RPL39	YJL189W	CUP2	P15315	225 aa		0.79	□□□□□ -2.28
RPL39	YJL189W	SLM5	P25345	492 aa	Known RBP	0.79	□□□□□ -2.28
RPL39	YJL189W	YCR051W	P25631	222 aa		0.79	□□□□□ -2.28
RPL39	YJL189W	SEC27	P41811	889 aa	Known RBP	0.79	□□□□□ -2.28
RPL39	YJL189W	BNI5	P53890	448 aa	Known RBP	0.79	□□□□□ -2.28
RPL39	YJL189W	SLT2	Q00772	484 aa		0.79	□□□□□ -2.28
RPL39	YJL189W	VTI1	Q04338	217 aa		0.79	□□□□□ -2.28
RPL39	YJL189W	CDD1	Q06549	142 aa		0.79	□□□□□ -2.28
RPL39	YJL189W	GAT3	Q07928	141 aa		0.79	□□□□□ -2.28
RPL39	YJL189W	YDL109C	Q12103	647 aa		0.79	□□□□□ -2.28
RPL39	YJL189W	RPL12A	P0CX53	165 aa	Known RBP	0.78	□□□□□ -2.28
RPL39	YJL189W	RPL12B	P0CX54	165 aa		0.78	□□□□□ -2.28
RPL39	YJL189W	CLB1	P24868	471 aa		0.78	□□□□□ -2.28
RPL39	YJL189W	RPL16A	P26784	199 aa	Known RBP	0.78	□□□□□ -2.28
RPL39	YJL189W	ERV1	P27882	189 aa		0.78	□□□□□ -2.28
RPL39	YJL189W	RIM1	P32445	135 aa	Known RBP	0.78	□□□□□ -2.28
RPL39	YJL189W	SLM4	P38247	162 aa		0.78	□□□□□ -2.28
RPL39	YJL189W	AIM23	P47015	356 aa		0.78	□□□□□ -2.28
RPL39	YJL189W	TOM22	P49334	152 aa		0.78	□□□□□ -2.28
RPL39	YJL189W	GAS2	Q06135	555 aa		0.78	□□□□□ -2.28
RPL39	YJL189W	VPS54	Q12071	889 aa		0.78	□□□□□ -2.28
RPL39	YJL189W	MET2	P08465	486 aa		0.77	□□□□□ -2.29
RPL39	YJL189W	DOA1	P36037	715 aa		0.77	□□□□□ -2.29
RPL39	YJL189W	YKR032W	P36127	104 aa		0.77	□□□□□ -2.29
RPL39	YJL189W	ZTA1	P38230	334 aa	Known RBP	0.77	□□□□□ -2.29
RPL39	YJL189W	RBG1	P39729	369 aa		0.77	□□□□□ -2.29
RPL39	YJL189W	ASG7	P46993	209 aa		0.77	□□□□□ -2.29
RPL39	YJL189W	SHE4	P51534	789 aa		0.77	□□□□□ -2.29
RPL39	YJL189W	PRM1	P53835	661 aa		0.77	□□□□□ -2.29
RPL39	YJL189W	YPL080C	Q02826	108 aa		0.77	□□□□□ -2.29
RPL39	YJL189W	YPL113C	Q02961	396 aa		0.77	□□□□□ -2.29
RPL39	YJL189W	TAF11	Q04226	346 aa		0.77	□□□□□ -2.29
RPL39	YJL189W	PRP46	Q12417	451 aa	Predicted RBP	0.77	□□□□□ -2.29
RPL39	YJL189W	ARF1	P11076	181 aa	Known RBP	0.76	□□□□□ -2.29
RPL39	YJL189W	KRE1	P17260	313 aa		0.76	□□□□□ -2.29
RPL39	YJL189W	HPR1	P17629	752 aa	Known RBP	0.76	□□□□□ -2.29
RPL39	YJL189W	DAL81	P21657	970 aa		0.76	□□□□□ -2.29
RPL39	YJL189W	MIR1	P23641	311 aa	Known RBP	0.76	□□□□□ -2.29
RPL39	YJL189W	OLA1	P38219	394 aa	Known RBP	0.76	□□□□□ -2.29
RPL39	YJL189W	QDR3	P38227	689 aa		0.76	□□□□□ -2.29
RPL39	YJL189W	SMC2	P38989	1170 aa	Known RBP	0.76	□□□□□ -2.29
RPL39	YJL189W	ROG1	P53118	685 aa		0.76	□□□□□ -2.29
RPL39	YJL189W	MMT2	Q08970	484 aa		0.76	□□□□□ -2.29
RPL39	YJL189W	REC107	P21651	314 aa		0.75	□□□□□ -2.29
RPL39	YJL189W	RPB9	P27999	122 aa		0.75	□□□□□ -2.29
RPL39	YJL189W	HSP104	P31539	908 aa	Known RBP	0.75	□□□□□ -2.29
RPL39	YJL189W	TIP20	P33891	701 aa		0.75	□□□□□ -2.29
RPL39	YJL189W	NAS6	P50086	228 aa		0.75	□□□□□ -2.29
RPL39	YJL189W	SCS7	Q03529	384 aa		0.75	□□□□□ -2.29
RPL39	YJL189W	YMR244W	Q04018	355 aa		0.75	□□□□□ -2.29
RPL39	YJL189W	UTP15	Q04305	513 aa	Known RBP	0.75	□□□□□ -2.29
RPL39	YJL189W	YDR222W	Q04925	415 aa		0.75	□□□□□ -2.29
RPL39	YJL189W	RUP1	Q12242	671 aa		0.75	□□□□□ -2.29
RPL39	YJL189W	BGL2	P15703	313 aa	Known RBP	0.74	□□□□□ -2.29
RPL39	YJL189W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.74	□□□□□ -2.29	not detected
RPL39	YJL189W	YSC83	P32792	385 aa		0.74	□□□□□ -2.29
RPL39	YJL189W	YER084W	P40057	128 aa		0.74	□□□□□ -2.29
RPL39	YJL189W	BAT2	P47176	376 aa	Known RBP	0.74	□□□□□ -2.29
RPL39	YJL189W	ERO1	Q03103	563 aa		0.74	□□□□□ -2.29
RPL39	YJL189W	URC2	Q04411	772 aa		0.74	□□□□□ -2.29
RPL39	YJL189W	APC4	Q04601	652 aa		0.74	□□□□□ -2.29
RPL39	YJL189W	RLP24	Q07915	199 aa	Known RBP	0.74	□□□□□ -2.29
RPL39	YJL189W	PLB3	Q08108	686 aa		0.74	□□□□□ -2.29
RPL39	YJL189W	MED2	Q12124	431 aa		0.74	□□□□□ -2.29
RPL39	YJL189W	YDR018C	Q12185	396 aa		0.74	□□□□□ -2.29
RPL39	YJL189W	TDH2	P00358	332 aa	Known RBP	0.73	□□□□□ -2.29
RPL39	YJL189W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.73	□□□□□ -2.29	not detected
RPL39	YJL189W	URA7	P28274	579 aa	Known RBP	0.73	□□□□□ -2.29
RPL39	YJL189W	TAE1	P38340	232 aa		0.73	□□□□□ -2.29
RPL39	YJL189W	FAD1	P38913	306 aa		0.73	□□□□□ -2.29
RPL39	YJL189W	PCL7	P40186	285 aa		0.73	□□□□□ -2.29
RPL39	YJL189W	YDR341C	Q05506	607 aa	Known RBP	0.73	□□□□□ -2.29
RPL39	YJL189W	ECM19	Q06011	112 aa		0.73	□□□□□ -2.29
RPL39	YJL189W	DXO1	Q06349	442 aa		0.73	□□□□□ -2.29
RPL39	YJL189W	YLH47	Q06493	454 aa		0.73	□□□□□ -2.29
RPL39	YJL189W	YER188W	P40103	239 aa		0.72	□□□□□ -2.29
RPL39	YJL189W	NDE1	P40215	560 aa		0.72	□□□□□ -2.29
RPL39	YJL189W	MNN5	P46982	586 aa		0.72	□□□□□ -2.29
RPL39	YJL189W	CWC22	P53333	577 aa	Known RBP	0.72	□□□□□ -2.29
RPL39	YJL189W	PRP3	Q03338	469 aa	Predicted RBP	0.72	□□□□□ -2.29
RPL39	YJL189W	INP1	Q03694	420 aa		0.72	□□□□□ -2.29
RPL39	YJL189W	GMC1	Q04399	608 aa		0.72	□□□□□ -2.29
RPL39	YJL189W	YLR456W	Q06199	204 aa		0.72	□□□□□ -2.29
RPL39	YJL189W	ARR1	Q06596	294 aa		0.72	□□□□□ -2.29
RPL39	YJL189W	AEP3	Q12089	606 aa		0.72	□□□□□ -2.29
RPL39	YJL189W	PHO91	P27514	894 aa		0.71	□□□□□ -2.3
RPL39	YJL189W	ZRT3	P34240	503 aa		0.71	□□□□□ -2.3
RPL39	YJL189W	HSH155	P49955	971 aa	Known RBP	0.71	□□□□□ -2.3
RPL39	YJL189W	NSE1	Q07913	336 aa		0.71	□□□□□ -2.3
RPL39	YJL189W	SLM3	Q12093	417 aa		0.71	□□□□□ -2.3
RPL39	YJL189W	YPR063C	Q12160	140 aa		0.71	□□□□□ -2.3
RPL39	YJL189W	RNA1	P11745	407 aa	Known RBP	0.7	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms