RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	YLL007C	Q07799	665 aa		2.61	□□□□□ -1.99
VHR1	YIL056W	RMD5	Q12508	421 aa		2.61	□□□□□ -1.99
VHR1	YIL056W	CDC36	P06100	191 aa	Predicted RBP	2.6	□□□□□ -1.99
VHR1	YIL056W	RPS8A	P0CX39	200 aa	Known RBP	2.6	□□□□□ -1.99
VHR1	YIL056W	RPS8B	P0CX40	200 aa	Known RBP	2.6	□□□□□ -1.99
VHR1	YIL056W	FUS3	P16892	353 aa	Known RBP	2.6	□□□□□ -1.99
VHR1	YIL056W	UGA1	P17649	471 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	YBR137W	P38276	179 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	PET100	P38958	111 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	STN1	P38960	494 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	COX14	P39103	70 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	YER079W	P40052	210 aa	Known RBP	2.6	□□□□□ -1.99
VHR1	YIL056W	YRB2	P40517	327 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	SHY1	P53266	389 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	MTM1	P53320	366 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	RTT102	P53330	157 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	SRL4	Q03085	281 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	MMT1	Q03218	510 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	CCE1	Q03702	353 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	YOL107W	Q12239	342 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	WTM1	Q12363	437 aa	Known RBP	2.6	□□□□□ -1.99
VHR1	YIL056W	CFT1	Q06632	1357 aa	Known RBP	2.6	□□□□□ -1.99
VHR1	YIL056W	ARO4	P32449	370 aa	Known RBP	2.6	□□□□□ -1.99
VHR1	YIL056W	CYS4	P32582	507 aa	Known RBP	2.6	□□□□□ -1.99
VHR1	YIL056W	RRP1	P35178	278 aa	Predicted RBP	2.6	□□□□□ -1.99
VHR1	YIL056W	YER085C	P40058	173 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	SHQ1	P40486	507 aa	Predicted RBP	2.6	□□□□□ -1.99
VHR1	YIL056W	OTU1	P43558	301 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	BRO1	P48582	844 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	HSH155	P49955	971 aa	Known RBP	2.6	□□□□□ -1.99
VHR1	YIL056W	BIO3	P50277	480 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	STD1	Q02794	444 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	YMR027W	Q04371	470 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	GTO3	Q04806	366 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	ATG34	Q12292	412 aa		2.6	□□□□□ -1.99
VHR1	YIL056W	CDC21	P06785	304 aa		2.59	□□□□□ -1.99
VHR1	YIL056W	DST1	P07273	309 aa		2.59	□□□□□ -1.99
VHR1	YIL056W	GAL3	P13045	520 aa		2.59	□□□□□ -1.99
VHR1	YIL056W	SAG1	P20840	650 aa		2.59	□□□□□ -1.99
VHR1	YIL056W	RIM1	P32445	135 aa	Known RBP	2.59	□□□□□ -1.99
VHR1	YIL056W	OLA1	P38219	394 aa	Known RBP	2.59	□□□□□ -1.99
VHR1	YIL056W	ZTA1	P38230	334 aa	Known RBP	2.59	□□□□□ -1.99
VHR1	YIL056W	YHR045W	P38775	560 aa		2.59	□□□□□ -1.99
VHR1	YIL056W	RIB4	P50861	169 aa	Predicted RBP	2.59	□□□□□ -1.99
VHR1	YIL056W	YGL039W	P53183	348 aa	Known RBP	2.59	□□□□□ -1.99
VHR1	YIL056W	RTC4	P53850	401 aa		2.59	□□□□□ -1.99
VHR1	YIL056W	RRG8	Q06109	277 aa		2.59	□□□□□ -1.99
VHR1	YIL056W	NDL1	Q06568	189 aa		2.59	□□□□□ -1.99
VHR1	YIL056W	VAC14	Q06708	880 aa		2.59	□□□□□ -1.99
VHR1	YIL056W	CYC3	P06182	269 aa		2.58	□□□□□ -2
VHR1	YIL056W	MEK1	P24719	497 aa	Predicted RBP	2.58	□□□□□ -2
VHR1	YIL056W	PTK1	P36002	662 aa	Predicted RBP	2.58	□□□□□ -2
VHR1	YIL056W	SWC5	P38326	303 aa		2.58	□□□□□ -2
VHR1	YIL056W	YHR182W	P38870	785 aa		2.58	□□□□□ -2
VHR1	YIL056W	RCY1	P39531	840 aa		2.58	□□□□□ -2
VHR1	YIL056W	VHS2	P40463	436 aa		2.58	□□□□□ -2
VHR1	YIL056W	YGL114W	P53134	725 aa		2.58	□□□□□ -2
VHR1	YIL056W	YGR117C	P53270	476 aa		2.58	□□□□□ -2
VHR1	YIL056W	DBP6	P53734	629 aa	Known RBP	2.58	□□□□□ -2
VHR1	YIL056W	GGA1	Q06336	557 aa		2.58	□□□□□ -2
VHR1	YIL056W	SRL2	Q12020	392 aa		2.58	□□□□□ -2
VHR1	YIL056W	TPT1	Q12272	230 aa	Known RBP	2.58	□□□□□ -2
VHR1	YIL056W	CMC2	Q3E7A4	109 aa		2.58	□□□□□ -2
VHR1	YIL056W	SSK22	P25390	1331 aa	Predicted RBP	2.58	□□□□□ -2
VHR1	YIL056W	ADE4	P04046	510 aa	Known RBP	2.58	□□□□□ -2
VHR1	YIL056W	RNR2	P09938	399 aa	Known RBP	2.58	□□□□□ -2
VHR1	YIL056W	IMA3	P0CW40	589 aa		2.58	□□□□□ -2
VHR1	YIL056W	IMA4	P0CW41	589 aa		2.58	□□□□□ -2
VHR1	YIL056W	YPK2	P18961	677 aa		2.58	□□□□□ -2
VHR1	YIL056W	YCR016W	P25617	290 aa	Known RBP	2.58	□□□□□ -2
VHR1	YIL056W	HXT1	P32465	570 aa		2.58	□□□□□ -2
VHR1	YIL056W	END3	P39013	349 aa		2.58	□□□□□ -2
VHR1	YIL056W	MMF1	P40185	145 aa	Known RBP	2.58	□□□□□ -2
VHR1	YIL056W	JLP2	P40206	208 aa		2.58	□□□□□ -2
VHR1	YIL056W	MAM33	P40513	266 aa		2.58	□□□□□ -2
VHR1	YIL056W	HAC1	P41546	238 aa		2.58	□□□□□ -2
VHR1	YIL056W	YIP5	P53108	310 aa		2.58	□□□□□ -2
VHR1	YIL056W	URH1	Q04179	340 aa		2.58	□□□□□ -2
VHR1	YIL056W	LOT6	Q07923	191 aa		2.58	□□□□□ -2
VHR1	YIL056W	IMA2	Q08295	589 aa		2.58	□□□□□ -2
VHR1	YIL056W	NCA2	Q12374	616 aa		2.58	□□□□□ -2
VHR1	YIL056W	FMP16	Q12497	93 aa		2.58	□□□□□ -2
VHR1	YIL056W	LAG2	Q92325	660 aa		2.58	□□□□□ -2
VHR1	YIL056W	ISY1	P21374	235 aa	Predicted RBP	2.57	□□□□□ -2
VHR1	YIL056W	SPR1	P32603	445 aa		2.57	□□□□□ -2
VHR1	YIL056W	COX13	P32799	129 aa		2.57	□□□□□ -2
VHR1	YIL056W	CSE2	P33308	149 aa		2.57	□□□□□ -2
VHR1	YIL056W	FMC1	P40491	155 aa		2.57	□□□□□ -2
VHR1	YIL056W	BNA6	P43619	295 aa		2.57	□□□□□ -2
VHR1	YIL056W	YFR057W	P43625	151 aa		2.57	□□□□□ -2
VHR1	YIL056W	YHC3	P47040	408 aa		2.57	□□□□□ -2
VHR1	YIL056W	VOA1	P53262	265 aa		2.57	□□□□□ -2
VHR1	YIL056W	RET3	P53600	189 aa		2.57	□□□□□ -2
VHR1	YIL056W	CAB5	Q03941	241 aa		2.57	□□□□□ -2
VHR1	YIL056W	GPN3	Q06543	272 aa		2.57	□□□□□ -2
VHR1	YIL056W	ARR2	Q06597	130 aa		2.57	□□□□□ -2
VHR1	YIL056W	MHR1	Q06630	226 aa		2.57	□□□□□ -2
VHR1	YIL056W	YPR078C	Q06813	372 aa		2.57	□□□□□ -2
VHR1	YIL056W	HTZ1	Q12692	134 aa	Known RBP	2.57	□□□□□ -2
VHR1	YIL056W	SRN2	Q99176	213 aa		2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms