RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W RPL12BP0CX54 165 aa1.84□□□□□ -2.11
RPF1YHR088W DAL5P15365 543 aa1.84□□□□□ -2.11
RPF1YHR088W FUR1P18562 216 aaKnown RBP1.84□□□□□ -2.11
RPF1YHR088W SEC27P41811 889 aaKnown RBP1.84□□□□□ -2.11
RPF1YHR088W TCB2P48231 1178 aa1.84□□□□□ -2.11
RPF1YHR088W PIB2P53191 635 aa1.84□□□□□ -2.11
RPF1YHR088W MRX11Q03079 207 aa1.84□□□□□ -2.11
RPF1YHR088W YLR456WQ06199 204 aa1.84□□□□□ -2.11
RPF1YHR088W VPS54Q12071 889 aa1.84□□□□□ -2.11
RPF1YHR088W YAL067W-AQ8TGK6 75 aa1.84□□□□□ -2.11
RPF1YHR088W INH1P01097 85 aa1.83□□□□□ -2.12
RPF1YHR088W ERV1P27882 189 aa1.83□□□□□ -2.12
RPF1YHR088W RIM1P32445 135 aaKnown RBP1.83□□□□□ -2.12
RPF1YHR088W PAC11P40960 533 aa1.83□□□□□ -2.12
RPF1YHR088W URC2Q04411 772 aa1.83□□□□□ -2.12
RPF1YHR088W RRG1Q12167 365 aaPredicted RBP1.83□□□□□ -2.12
RPF1YHR088W PDX1P16451 410 aa1.82□□□□□ -2.12
RPF1YHR088W NRP1P32770 719 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
RPF1YHR088W JNM1P36224 373 aa1.82□□□□□ -2.12
RPF1YHR088W QDR3P38227 689 aa1.82□□□□□ -2.12
RPF1YHR088W PMT5P52867 743 aa1.82□□□□□ -2.12
RPF1YHR088W SLT2Q00772 484 aa1.82□□□□□ -2.12
RPF1YHR088W NDL1Q06568 189 aa1.82□□□□□ -2.12
RPF1YHR088W NOP6Q07623 225 aaKnown RBP1.82□□□□□ -2.12
RPF1YHR088W AAD15Q08361 143 aa1.82□□□□□ -2.12
RPF1YHR088W YOR376WQ08900 122 aa1.82□□□□□ -2.12
RPF1YHR088W YDL109CQ12103 647 aa1.82□□□□□ -2.12
RPF1YHR088W RPC53P25441 422 aa1.81□□□□□ -2.12
RPF1YHR088W SDH4P37298 181 aa1.81□□□□□ -2.12
RPF1YHR088W FAD1P38913 306 aa1.81□□□□□ -2.12
RPF1YHR088W GGC1P38988 300 aa1.81□□□□□ -2.12
RPF1YHR088W NAB3P38996 802 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
RPF1YHR088W HEM14P40012 539 aa1.81□□□□□ -2.12
RPF1YHR088W YJR054WP47114 497 aa1.81□□□□□ -2.12
RPF1YHR088W ABM1P47146 123 aa1.81□□□□□ -2.12
RPF1YHR088W YDR541CQ03049 344 aa1.81□□□□□ -2.12
RPF1YHR088W ERO1Q03103 563 aa1.81□□□□□ -2.12
RPF1YHR088W RMT2Q03305 412 aa1.81□□□□□ -2.12
RPF1YHR088W GMC1Q04399 608 aa1.81□□□□□ -2.12
RPF1YHR088W OPI3P05375 206 aa1.8□□□□□ -2.12
RPF1YHR088W CUP2P15315 225 aa1.8□□□□□ -2.12
RPF1YHR088W RRP7P25368 297 aaPredicted RBP1.8□□□□□ -2.12
RPF1YHR088W PHO91P27514 894 aa1.8□□□□□ -2.12
RPF1YHR088W PPQ1P32945 549 aa1.8□□□□□ -2.12
RPF1YHR088W LTV1P34078 463 aa1.8□□□□□ -2.12
RPF1YHR088W ATG12P38316 186 aa1.8□□□□□ -2.12
RPF1YHR088W RTT102P53330 157 aa1.8□□□□□ -2.12
RPF1YHR088W PRM1P53835 661 aa1.8□□□□□ -2.12
RPF1YHR088W SUB1P54000 292 aaKnown RBP1.8□□□□□ -2.12
RPF1YHR088W GAS2Q06135 555 aa1.8□□□□□ -2.12
RPF1YHR088W UAF30Q08747 228 aa1.8□□□□□ -2.12
RPF1YHR088W RPL23AP0CX41 137 aaKnown RBP1.79□□□□□ -2.12
RPF1YHR088W RPL23BP0CX42 137 aaKnown RBP1.79□□□□□ -2.12
RPF1YHR088W RNA1P11745 407 aaKnown RBP1.79□□□□□ -2.12
RPF1YHR088W MDH1P17505 334 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
RPF1YHR088W MRPL8P22353 238 aa1.79□□□□□ -2.12
RPF1YHR088W MIR1P23641 311 aaKnown RBP1.79□□□□□ -2.12
RPF1YHR088W ALK2P32789 676 aaPredicted RBP1.79□□□□□ -2.12
RPF1YHR088W TKL2P33315 681 aa1.79□□□□□ -2.12
RPF1YHR088W TIP20P33891 701 aa1.79□□□□□ -2.12
RPF1YHR088W YKR015CP36111 568 aa1.79□□□□□ -2.12
RPF1YHR088W EFM1P38732 585 aa1.79□□□□□ -2.12
RPF1YHR088W AIM23P47015 356 aa1.79□□□□□ -2.12
RPF1YHR088W YGR111WP53265 400 aa1.79□□□□□ -2.12
RPF1YHR088W VPS72Q03388 795 aa1.79□□□□□ -2.12
RPF1YHR088W API2Q04413 109 aa1.79□□□□□ -2.12
RPF1YHR088W BDH1P39714 382 aa1.78□□□□□ -2.12
RPF1YHR088W NAS6P50086 228 aa1.78□□□□□ -2.12
RPF1YHR088W CDH1P53197 566 aa1.78□□□□□ -2.12
RPF1YHR088W SPC19Q03954 165 aa1.78□□□□□ -2.12
RPF1YHR088W HPR1P17629 752 aaKnown RBP1.77□□□□□ -2.13
RPF1YHR088W PHO84P25297 587 aaKnown RBP1.77□□□□□ -2.13
RPF1YHR088W YSC83P32792 385 aa1.77□□□□□ -2.13
RPF1YHR088W YPT35P38815 214 aaKnown RBP1.77□□□□□ -2.13
RPF1YHR088W ECM14P38836 430 aa1.77□□□□□ -2.13
RPF1YHR088W YJR030CP47101 745 aa1.77□□□□□ -2.13
RPF1YHR088W ROG1P53118 685 aa1.77□□□□□ -2.13
RPF1YHR088W YGL088WP53151 121 aa1.77□□□□□ -2.13
RPF1YHR088W YOL029CQ08187 201 aa1.77□□□□□ -2.13
RPF1YHR088W CPT1P17898 393 aa1.76□□□□□ -2.13
RPF1YHR088W SWE1P32944 819 aa1.76□□□□□ -2.13
RPF1YHR088W ZIM17P42844 174 aa1.76□□□□□ -2.13
RPF1YHR088W NRM1P53718 249 aa1.76□□□□□ -2.13
RPF1YHR088W SMD1Q02260 146 aaPredicted RBP1.76□□□□□ -2.13
RPF1YHR088W YDL211CQ12121 372 aa1.76□□□□□ -2.13
RPF1YHR088W PDE2P06776 526 aa1.75□□□□□ -2.13
RPF1YHR088W RPS23AP0CX29 145 aaKnown RBP1.75□□□□□ -2.13
RPF1YHR088W RPS23BP0CX30 145 aa1.75□□□□□ -2.13
RPF1YHR088W COX10P21592 462 aa1.75□□□□□ -2.13
RPF1YHR088W EFM3P47163 339 aa1.75□□□□□ -2.13
RPF1YHR088W HSH155P49955 971 aaKnown RBP1.75□□□□□ -2.13
RPF1YHR088W DCI1Q08558 271 aa1.75□□□□□ -2.13
RPF1YHR088W BGL2P15703 313 aaKnown RBP1.74□□□□□ -2.13
RPF1YHR088W BUD13P46947 266 aaPredicted RBP1.74□□□□□ -2.13
RPF1YHR088W GAT3Q07928 141 aa1.74□□□□□ -2.13
RPF1YHR088W ISA2Q12425 185 aa1.74□□□□□ -2.13
RPF1YHR088W SSE1P32589 693 aaKnown RBP1.73□□□□□ -2.13
RPF1YHR088W BUD27P43573 796 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
RPF1YHR088W RLP24Q07915 199 aaKnown RBP1.73□□□□□ -2.13
RPF1YHR088W SRN2Q99176 213 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms