RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W RPL6AQ02326 176 aaKnown RBP3.96□□□□□ -1.78
HSP42YDR171W SMA1Q02651 245 aa3.96□□□□□ -1.78
HSP42YDR171W YMR178WQ03219 274 aaKnown RBP3.96□□□□□ -1.78
HSP42YDR171W YMR155WQ03795 547 aa3.96□□□□□ -1.78
HSP42YDR171W TRM12Q04235 462 aa3.96□□□□□ -1.78
HSP42YDR171W APC4Q04601 652 aa3.96□□□□□ -1.78
HSP42YDR171W VTA1Q06263 330 aa3.96□□□□□ -1.78
HSP42YDR171W ECM30Q06673 1274 aa3.96□□□□□ -1.78
HSP42YDR171W GRS2Q06817 618 aa3.96□□□□□ -1.78
HSP42YDR171W COS7Q07788 383 aa3.96□□□□□ -1.78
HSP42YDR171W YNG1Q08465 219 aa3.96□□□□□ -1.78
HSP42YDR171W FEX1Q08913 375 aa3.96□□□□□ -1.78
HSP42YDR171W HUA2Q12134 243 aa3.96□□□□□ -1.78
HSP42YDR171W SNU23Q12368 194 aaPredicted RBP3.96□□□□□ -1.78
HSP42YDR171W YBR298C-AQ8TGK4 73 aa3.96□□□□□ -1.78
HSP42YDR171W NSP1P14907 823 aaKnown RBP3.95□□□□□ -1.78
HSP42YDR171W AAC3P18238 307 aa3.95□□□□□ -1.78
HSP42YDR171W RPB8P20436 146 aa3.95□□□□□ -1.78
HSP42YDR171W DBP3P20447 523 aaKnown RBP3.95□□□□□ -1.78
HSP42YDR171W YCK1P23291 538 aa3.95□□□□□ -1.78
HSP42YDR171W SGV1P23293 657 aaKnown RBP3.95□□□□□ -1.78
HSP42YDR171W VMA16P23968 213 aa3.95□□□□□ -1.78
HSP42YDR171W PHO84P25297 587 aaKnown RBP3.95□□□□□ -1.78
HSP42YDR171W ATG22P25568 528 aa3.95□□□□□ -1.78
HSP42YDR171W GID7P25569 745 aa3.95□□□□□ -1.78
HSP42YDR171W MEI5P32489 222 aa3.95□□□□□ -1.78
HSP42YDR171W PAH1P32567 862 aa3.95□□□□□ -1.78
HSP42YDR171W MRPL6P32904 214 aa3.95□□□□□ -1.78
HSP42YDR171W FRE2P36033 711 aa3.95□□□□□ -1.78
HSP42YDR171W SRP72P38688 640 aaKnown RBP3.95□□□□□ -1.78
HSP42YDR171W YHR131CP38835 850 aa3.95□□□□□ -1.78
HSP42YDR171W FAD1P38913 306 aa3.95□□□□□ -1.78
HSP42YDR171W UIP3P39547 235 aa3.95□□□□□ -1.78
HSP42YDR171W YIL152WP40455 235 aa3.95□□□□□ -1.78
HSP42YDR171W GCD10P41814 478 aa3.95□□□□□ -1.78
HSP42YDR171W SER2P42941 309 aa3.95□□□□□ -1.78
HSP42YDR171W YFL012WP43580 148 aa3.95□□□□□ -1.78
HSP42YDR171W MNN5P46982 586 aa3.95□□□□□ -1.78
HSP42YDR171W LSM1P47017 172 aaKnown RBP3.95□□□□□ -1.78
HSP42YDR171W MDE1P47095 244 aa3.95□□□□□ -1.78
HSP42YDR171W ALT2P52892 507 aa3.95□□□□□ -1.78
HSP42YDR171W AIF1P52923 378 aa3.95□□□□□ -1.78
HSP42YDR171W LCL3P53153 274 aa3.95□□□□□ -1.78
HSP42YDR171W MPS2P53159 387 aa3.95□□□□□ -1.78
HSP42YDR171W RTT102P53330 157 aa3.95□□□□□ -1.78
HSP42YDR171W DBP6P53734 629 aaKnown RBP3.95□□□□□ -1.78
HSP42YDR171W LSM3P57743 89 aaKnown RBP3.95□□□□□ -1.78
HSP42YDR171W SPR6Q01684 191 aa3.95□□□□□ -1.78
HSP42YDR171W YMR160WQ03823 816 aa3.95□□□□□ -1.78
HSP42YDR171W BCH1Q05029 724 aa3.95□□□□□ -1.78
HSP42YDR171W HEL2Q05580 639 aaKnown RBP3.95□□□□□ -1.78
HSP42YDR171W YDL218WQ07629 317 aa3.95□□□□□ -1.78
HSP42YDR171W NRT1Q08485 598 aa3.95□□□□□ -1.78
HSP42YDR171W SAM4Q08985 325 aaKnown RBP3.95□□□□□ -1.78
HSP42YDR171W FEX2Q08991 375 aa3.95□□□□□ -1.78
HSP42YDR171W YPL119C-AQ3E751 87 aa3.95□□□□□ -1.78
HSP42YDR171W YHR213W-AQ8TGT4 77 aa3.95□□□□□ -1.78
HSP42YDR171W IZH4Q99393 312 aa3.95□□□□□ -1.78
HSP42YDR171W ATP1P07251 545 aaKnown RBP3.94□□□□□ -1.78
HSP42YDR171W SEC53P07283 254 aaKnown RBP3.94□□□□□ -1.78
HSP42YDR171W GRX2P17695 143 aaKnown RBP3.94□□□□□ -1.78
HSP42YDR171W RPB4P20433 221 aaPredicted RBP3.94□□□□□ -1.78
HSP42YDR171W HXT2P23585 541 aa3.94□□□□□ -1.78
HSP42YDR171W RPL24BP24000 155 aaKnown RBP3.94□□□□□ -1.78
HSP42YDR171W PGS1P25578 521 aa3.94□□□□□ -1.78
HSP42YDR171W YCL068CP25593 260 aa3.94□□□□□ -1.78
HSP42YDR171W YCR090CP25654 182 aaKnown RBP3.94□□□□□ -1.78
HSP42YDR171W CAM1P29547 415 aaKnown RBP3.94□□□□□ -1.78
HSP42YDR171W MRPL40P36534 297 aa3.94□□□□□ -1.78
HSP42YDR171W ATP3P38077 311 aaKnown RBP3.94□□□□□ -1.78
HSP42YDR171W YBL029WP38201 376 aa3.94□□□□□ -1.78
HSP42YDR171W ARC40P38328 384 aaKnown RBP3.94□□□□□ -1.78
HSP42YDR171W YHK8P38776 514 aa3.94□□□□□ -1.78
HSP42YDR171W YFL040WP43562 540 aa3.94□□□□□ -1.78
HSP42YDR171W SCD6P45978 349 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
HSP42YDR171W BUD13P46947 266 aaPredicted RBP3.94□□□□□ -1.78
HSP42YDR171W DUO1P53168 247 aaKnown RBP3.94□□□□□ -1.78
HSP42YDR171W NQM1P53228 333 aaPredicted RBP3.94□□□□□ -1.78
HSP42YDR171W VPS9P54787 451 aa3.94□□□□□ -1.78
HSP42YDR171W HER2Q03557 464 aa3.94□□□□□ -1.78
HSP42YDR171W CSN9Q03981 162 aa3.94□□□□□ -1.78
HSP42YDR171W HPT1Q04178 221 aaKnown RBP3.94□□□□□ -1.78
HSP42YDR171W DXO1Q06349 442 aa3.94□□□□□ -1.78
HSP42YDR171W GPI11Q06636 219 aa3.94□□□□□ -1.78
HSP42YDR171W UAF30Q08747 228 aa3.94□□□□□ -1.78
HSP42YDR171W RPN6Q12377 434 aa3.94□□□□□ -1.78
HSP42YDR171W YBR126W-AQ8TGU7 68 aa3.94□□□□□ -1.78
HSP42YDR171W LAG2Q92325 660 aa3.94□□□□□ -1.78
HSP42YDR171W SLH1P53327 1967 aaKnown RBP3.94□□□□□ -1.78
HSP42YDR171W RAD7P06779 565 aa3.93□□□□□ -1.78
HSP42YDR171W DSF1P0CX08 502 aa3.93□□□□□ -1.78
HSP42YDR171W YNR073CP0CX09 502 aa3.93□□□□□ -1.78
HSP42YDR171W YCR043CP25361 127 aa3.93□□□□□ -1.78
HSP42YDR171W SGF29P25554 259 aa3.93□□□□□ -1.78
HSP42YDR171W BUB2P26448 306 aaPredicted RBP3.93□□□□□ -1.78
HSP42YDR171W PRR1P28708 518 aa3.93□□□□□ -1.78
HSP42YDR171W FRE1P32791 686 aa3.93□□□□□ -1.78
HSP42YDR171W PDR3P33200 976 aa3.93□□□□□ -1.78
HSP42YDR171W MIA40P36046 403 aa3.93□□□□□ -1.78
HSP42YDR171W AUR1P36107 401 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms