RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C ADH1P00330 348 aaKnown RBP2.83□□□□□ -1.96
RUB1YDR139C DAP2P18962 818 aa2.83□□□□□ -1.96
RUB1YDR139C UBA1P22515 1024 aaKnown RBP2.83□□□□□ -1.96
RUB1YDR139C DBR1P24309 405 aaKnown RBP2.83□□□□□ -1.96
RUB1YDR139C LCP5P40079 357 aaPredicted RBP2.83□□□□□ -1.96
RUB1YDR139C YNR068CP53754 272 aa2.83□□□□□ -1.96
RUB1YDR139C YPL107WQ02873 248 aa2.83□□□□□ -1.96
RUB1YDR139C YLR177WQ06251 628 aa2.83□□□□□ -1.96
RUB1YDR139C HIF1Q12373 385 aa2.83□□□□□ -1.96
RUB1YDR139C RPL23AP0CX41 137 aaKnown RBP2.82□□□□□ -1.96
RUB1YDR139C RPL23BP0CX42 137 aaKnown RBP2.82□□□□□ -1.96
RUB1YDR139C DPH2P32461 534 aa2.82□□□□□ -1.96
RUB1YDR139C ANP1P32629 500 aa2.82□□□□□ -1.96
RUB1YDR139C ECT1P33412 323 aa2.82□□□□□ -1.96
RUB1YDR139C YKR015CP36111 568 aa2.82□□□□□ -1.96
RUB1YDR139C PEX22P39718 180 aa2.82□□□□□ -1.96
RUB1YDR139C HEM14P40012 539 aa2.82□□□□□ -1.96
RUB1YDR139C SEH1P53011 349 aaKnown RBP2.82□□□□□ -1.96
RUB1YDR139C YGR018CP53211 109 aa2.82□□□□□ -1.96
RUB1YDR139C ATP16Q12165 160 aa2.82□□□□□ -1.96
RUB1YDR139C FSH3Q99369 266 aa2.82□□□□□ -1.96
RUB1YDR139C ASP3-2P0CX77 362 aa2.81□□□□□ -1.96
RUB1YDR139C ASP3-3P0CX78 362 aa2.81□□□□□ -1.96
RUB1YDR139C ASP3-4P0CX79 362 aa2.81□□□□□ -1.96
RUB1YDR139C ASP3-1P0CZ17 362 aa2.81□□□□□ -1.96
RUB1YDR139C UNG1P12887 359 aa2.81□□□□□ -1.96
RUB1YDR139C PHO84P25297 587 aaKnown RBP2.81□□□□□ -1.96
RUB1YDR139C RDS1P25611 832 aa2.81□□□□□ -1.96
RUB1YDR139C RPL21AQ02753 160 aaKnown RBP2.81□□□□□ -1.96
RUB1YDR139C AIM33Q04516 312 aa2.81□□□□□ -1.96
RUB1YDR139C YDR115WQ04598 105 aa2.81□□□□□ -1.96
RUB1YDR139C RPL21BQ12672 160 aaKnown RBP2.81□□□□□ -1.96
RUB1YDR139C THR4P16120 514 aaKnown RBP2.8□□□□□ -1.96
RUB1YDR139C ZUO1P32527 433 aaKnown RBP2.8□□□□□ -1.96
RUB1YDR139C TOA1P32773 286 aa2.8□□□□□ -1.96
RUB1YDR139C COS9P36034 407 aa2.8□□□□□ -1.96
RUB1YDR139C ADH5P38113 351 aaKnown RBP2.8□□□□□ -1.96
RUB1YDR139C RPA34P47006 233 aaPredicted RBP2.8□□□□□ -1.96
RUB1YDR139C YJR030CP47101 745 aa2.8□□□□□ -1.96
RUB1YDR139C RNH201P53942 307 aa2.8□□□□□ -1.96
RUB1YDR139C UTP6Q02354 440 aaKnown RBP2.8□□□□□ -1.96
RUB1YDR139C GAS2Q06135 555 aa2.8□□□□□ -1.96
RUB1YDR139C YOL075CQ08234 1294 aa2.8□□□□□ -1.96
RUB1YDR139C LDB17Q12342 491 aa2.8□□□□□ -1.96
RUB1YDR139C DET1Q99288 334 aaKnown RBP2.8□□□□□ -1.96
RUB1YDR139C UBA3Q99344 299 aa2.8□□□□□ -1.96
RUB1YDR139C MAS1P10507 462 aa2.79□□□□□ -1.96
RUB1YDR139C MIR1P23641 311 aaKnown RBP2.79□□□□□ -1.96
RUB1YDR139C GRR1P24814 1151 aa2.79□□□□□ -1.96
RUB1YDR139C YBR241CP38142 488 aa2.79□□□□□ -1.96
RUB1YDR139C YFL012WP43580 148 aa2.79□□□□□ -1.96
RUB1YDR139C FLC3P53121 802 aa2.79□□□□□ -1.96
RUB1YDR139C YMR310CQ04867 317 aaPredicted RBP2.79□□□□□ -1.96
RUB1YDR139C AIM45Q12480 344 aaKnown RBP2.79□□□□□ -1.96
RUB1YDR139C SFG1Q12507 346 aa2.79□□□□□ -1.96
RUB1YDR139C NBL1Q3E7Y6 73 aa2.79□□□□□ -1.96
RUB1YDR139C RPS16AP0CX51 143 aaKnown RBP2.78□□□□□ -1.96
RUB1YDR139C RPS16BP0CX52 143 aaKnown RBP2.78□□□□□ -1.96
RUB1YDR139C FAR1P21268 830 aa2.78□□□□□ -1.96
RUB1YDR139C HMX1P32339 317 aa2.78□□□□□ -1.96
RUB1YDR139C YPT35P38815 214 aaKnown RBP2.78□□□□□ -1.96
RUB1YDR139C APE4P38821 490 aa2.78□□□□□ -1.96
RUB1YDR139C CHL4P38907 458 aa2.78□□□□□ -1.96
RUB1YDR139C AIM23P47015 356 aa2.78□□□□□ -1.96
RUB1YDR139C BIO3P50277 480 aa2.78□□□□□ -1.96
RUB1YDR139C YGR015CP53208 328 aa2.78□□□□□ -1.96
RUB1YDR139C LST7P53237 242 aa2.78□□□□□ -1.96
RUB1YDR139C SLT2Q00772 484 aa2.78□□□□□ -1.96
RUB1YDR139C RNY1Q02933 434 aaKnown RBP2.78□□□□□ -1.96
RUB1YDR139C SMP3Q04174 516 aa2.78□□□□□ -1.96
RUB1YDR139C SRO7Q12038 1033 aa2.78□□□□□ -1.96
RUB1YDR139C GLE1Q12315 538 aa2.78□□□□□ -1.96
RUB1YDR139C PDC2P32896 925 aa2.77□□□□□ -1.97
RUB1YDR139C BLI1P35727 113 aa2.77□□□□□ -1.97
RUB1YDR139C LAS1P36146 502 aaPredicted RBP2.77□□□□□ -1.97
RUB1YDR139C SHE1P38200 338 aa2.77□□□□□ -1.97
RUB1YDR139C SHE3P38272 425 aaKnown RBP2.77□□□□□ -1.97
RUB1YDR139C RBG1P39729 369 aa2.77□□□□□ -1.97
RUB1YDR139C YNL143CP53908 130 aa2.77□□□□□ -1.97
RUB1YDR139C PIN3Q06449 215 aa2.77□□□□□ -1.97
RUB1YDR139C YOR376WQ08900 122 aa2.77□□□□□ -1.97
RUB1YDR139C NFI1Q12216 726 aa2.77□□□□□ -1.97
RUB1YDR139C TPI1P00942 248 aaKnown RBP2.76□□□□□ -1.97
RUB1YDR139C CKI1P20485 582 aa2.76□□□□□ -1.97
RUB1YDR139C EPT1P22140 391 aa2.76□□□□□ -1.97
RUB1YDR139C PMT2P31382 759 aa2.76□□□□□ -1.97
RUB1YDR139C PTK1P36002 662 aaPredicted RBP2.76□□□□□ -1.97
RUB1YDR139C YJR054WP47114 497 aa2.76□□□□□ -1.97
RUB1YDR139C VEL1P53058 206 aa2.76□□□□□ -1.97
RUB1YDR139C CDH1P53197 566 aa2.76□□□□□ -1.97
RUB1YDR139C DBP9Q06218 594 aaKnown RBP2.76□□□□□ -1.97
RUB1YDR139C IES4Q08561 116 aa2.76□□□□□ -1.97
RUB1YDR139C SLM3Q12093 417 aa2.76□□□□□ -1.97
RUB1YDR139C YOR012WQ12351 137 aa2.76□□□□□ -1.97
RUB1YDR139C RAX2Q12465 1220 aa2.76□□□□□ -1.97
RUB1YDR139C RPS19AP07280 144 aaKnown RBP2.75□□□□□ -1.97
RUB1YDR139C RPS19BP07281 144 aaPredicted RBP2.75□□□□□ -1.97
RUB1YDR139C PUT4P15380 627 aa2.75□□□□□ -1.97
RUB1YDR139C ARF2P19146 181 aaKnown RBP2.75□□□□□ -1.97
RUB1YDR139C SWI3P32591 825 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms