RNA–Protein interactions for RNA: YDR048C

YDR048C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR048C, Length 315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR048CYDR048C YGL088WP53151 121 aa1□□□□□ -2.25
YDR048CYDR048C CWC22P53333 577 aaKnown RBP1□□□□□ -2.25
YDR048CYDR048C PRM1P53835 661 aa1□□□□□ -2.25
YDR048CYDR048C SMD1Q02260 146 aaPredicted RBP1□□□□□ -2.25
YDR048CYDR048C SFI1Q12369 946 aa1□□□□□ -2.25
YDR048CYDR048C YRF1-4O13559 1382 aa0.99□□□□□ -2.25
YDR048CYDR048C MIG1P27705 504 aa0.99□□□□□ -2.25
YDR048CYDR048C NFU1P32860 256 aa0.99□□□□□ -2.25
YDR048CYDR048C SEC27P41811 889 aaKnown RBP0.99□□□□□ -2.25
YDR048CYDR048C HSH155P49955 971 aaKnown RBP0.99□□□□□ -2.25
YDR048CYDR048C NBP1P52919 319 aaPredicted RBP0.99□□□□□ -2.25
YDR048CYDR048C ROG1P53118 685 aa0.99□□□□□ -2.25
YDR048CYDR048C PIB2P53191 635 aa0.99□□□□□ -2.25
YDR048CYDR048C CDH1P53197 566 aa0.99□□□□□ -2.25
YDR048CYDR048C RGM1Q00453 211 aa0.99□□□□□ -2.25
YDR048CYDR048C YMR010WQ03687 405 aa0.99□□□□□ -2.25
YDR048CYDR048C GMC1Q04399 608 aa0.99□□□□□ -2.25
YDR048CYDR048C URC2Q04411 772 aa0.99□□□□□ -2.25
YDR048CYDR048C YOL029CQ08187 201 aa0.99□□□□□ -2.25
YDR048CYDR048C YDL109CQ12103 647 aa0.99□□□□□ -2.25
YDR048CYDR048C YDL211CQ12121 372 aa0.99□□□□□ -2.25
YDR048CYDR048C FRE8Q12209 686 aa0.99□□□□□ -2.25
YDR048CYDR048C RPL23AP0CX41 137 aaKnown RBP0.98□□□□□ -2.25
YDR048CYDR048C RPL23BP0CX42 137 aaKnown RBP0.98□□□□□ -2.25
YDR048CYDR048C MIR1P23641 311 aaKnown RBP0.98□□□□□ -2.25
YDR048CYDR048C RPL16AP26784 199 aaKnown RBP0.98□□□□□ -2.25
YDR048CYDR048C URA7P28274 579 aaKnown RBP0.98□□□□□ -2.25
YDR048CYDR048C DOA1P36037 715 aa0.98□□□□□ -2.25
YDR048CYDR048C ZTA1P38230 334 aaKnown RBP0.98□□□□□ -2.25
YDR048CYDR048C SER3P40054 469 aa0.98□□□□□ -2.25
YDR048CYDR048C BNI5P53890 448 aaKnown RBP0.98□□□□□ -2.25
YDR048CYDR048C SLT2Q00772 484 aa0.98□□□□□ -2.25
YDR048CYDR048C YPL113CQ02961 396 aa0.98□□□□□ -2.25
YDR048CYDR048C NOP6Q07623 225 aaKnown RBP0.98□□□□□ -2.25
YDR048CYDR048C AFI1Q99222 893 aa0.98□□□□□ -2.25
YDR048CYDR048C OPI3P05375 206 aa0.97□□□□□ -2.25
YDR048CYDR048C HPR1P17629 752 aaKnown RBP0.97□□□□□ -2.25
YDR048CYDR048C CPT1P17898 393 aa0.97□□□□□ -2.25
YDR048CYDR048C SNF6P18888 332 aa0.97□□□□□ -2.25
YDR048CYDR048C SLM5P25345 492 aaKnown RBP0.97□□□□□ -2.25
YDR048CYDR048C LSM5P40089 93 aaKnown RBP0.97□□□□□ -2.25
YDR048CYDR048C AIM23P47015 356 aa0.97□□□□□ -2.25
YDR048CYDR048C EFM3P47163 339 aa0.97□□□□□ -2.25
YDR048CYDR048C MIX17Q03667 156 aa0.97□□□□□ -2.25
YDR048CYDR048C DIB1Q06819 143 aaPredicted RBP0.97□□□□□ -2.25
YDR048CYDR048C PRP46Q12417 451 aaPredicted RBP0.97□□□□□ -2.25
YDR048CYDR048C FLO11P08640 1367 aa0.96□□□□□ -2.26
YDR048CYDR048C TDH2P00358 332 aaKnown RBP0.96□□□□□ -2.26
YDR048CYDR048C TDH3P00359 332 aaKnown RBP RIP-Chip data0.96□□□□□ -2.26not detected
YDR048CYDR048C RNA1P11745 407 aaKnown RBP0.96□□□□□ -2.26
YDR048CYDR048C SAG1P20840 650 aa0.96□□□□□ -2.26
YDR048CYDR048C RRP7P25368 297 aaPredicted RBP0.96□□□□□ -2.26
YDR048CYDR048C PMT2P31382 759 aa0.96□□□□□ -2.26
YDR048CYDR048C RIM1P32445 135 aaKnown RBP0.96□□□□□ -2.26
YDR048CYDR048C BYE1P36106 594 aa0.96□□□□□ -2.26
YDR048CYDR048C QDR3P38227 689 aa0.96□□□□□ -2.26
YDR048CYDR048C YMR262WP38430 313 aa0.96□□□□□ -2.26
YDR048CYDR048C YLR456WQ06199 204 aa0.96□□□□□ -2.26
YDR048CYDR048C YDR018CQ12185 396 aa0.96□□□□□ -2.26
YDR048CYDR048C NRP1P32770 719 aaKnown RBP RIP-Chip data0.95□□□□□ -2.26not detected
YDR048CYDR048C YKR032WP36127 104 aa0.95□□□□□ -2.26
YDR048CYDR048C EFM1P38732 585 aa0.95□□□□□ -2.26
YDR048CYDR048C SMC2P38989 1170 aaKnown RBP0.95□□□□□ -2.26
YDR048CYDR048C PAC11P40960 533 aa0.95□□□□□ -2.26
YDR048CYDR048C GPD2P41911 440 aaKnown RBP0.95□□□□□ -2.26
YDR048CYDR048C SHE4P51534 789 aa0.95□□□□□ -2.26
YDR048CYDR048C SCS7Q03529 384 aa0.95□□□□□ -2.26
YDR048CYDR048C GTO3Q04806 366 aa0.95□□□□□ -2.26
YDR048CYDR048C GAS2Q06135 555 aa0.95□□□□□ -2.26
YDR048CYDR048C RLP24Q07915 199 aaKnown RBP0.95□□□□□ -2.26
YDR048CYDR048C GAT3Q07928 141 aa0.95□□□□□ -2.26
YDR048CYDR048C CLP1Q08685 445 aaPredicted RBP0.95□□□□□ -2.26
YDR048CYDR048C AEP3Q12089 606 aa0.95□□□□□ -2.26
YDR048CYDR048C DAL81P21657 970 aa0.94□□□□□ -2.26
YDR048CYDR048C ADK2P26364 225 aa0.94□□□□□ -2.26
YDR048CYDR048C ERV1P27882 189 aa0.94□□□□□ -2.26
YDR048CYDR048C YKR015CP36111 568 aa0.94□□□□□ -2.26
YDR048CYDR048C YBL081WP38180 368 aaKnown RBP0.94□□□□□ -2.26
YDR048CYDR048C PCL7P40186 285 aa0.94□□□□□ -2.26
YDR048CYDR048C MNN5P46982 586 aa0.94□□□□□ -2.26
YDR048CYDR048C MMT2Q08970 484 aa0.94□□□□□ -2.26
YDR048CYDR048C VPS54Q12071 889 aa0.94□□□□□ -2.26
YDR048CYDR048C SLM3Q12093 417 aa0.94□□□□□ -2.26
YDR048CYDR048C MET2P08465 486 aa0.93□□□□□ -2.26
YDR048CYDR048C BGL2P15703 313 aaKnown RBP0.93□□□□□ -2.26
YDR048CYDR048C YSC83P32792 385 aa0.93□□□□□ -2.26
YDR048CYDR048C RRG9P40156 214 aa0.93□□□□□ -2.26
YDR048CYDR048C BUD13P46947 266 aaPredicted RBP0.93□□□□□ -2.26
YDR048CYDR048C RTT102P53330 157 aa0.93□□□□□ -2.26
YDR048CYDR048C ERO1Q03103 563 aa0.93□□□□□ -2.26
YDR048CYDR048C YLR287CQ05881 355 aa0.93□□□□□ -2.26
YDR048CYDR048C ECM19Q06011 112 aa0.93□□□□□ -2.26
YDR048CYDR048C NDL1Q06568 189 aa0.93□□□□□ -2.26
YDR048CYDR048C TSR2Q06672 205 aaKnown RBP0.93□□□□□ -2.26
YDR048CYDR048C PLB3Q08108 686 aa0.93□□□□□ -2.26
YDR048CYDR048C SGT2Q12118 346 aaKnown RBP0.93□□□□□ -2.26
YDR048CYDR048C SCM3Q12334 223 aa0.93□□□□□ -2.26
YDR048CYDR048C BEM2P39960 2167 aaKnown RBP0.93□□□□□ -2.26
YDR048CYDR048C MRPL8P22353 238 aa0.92□□□□□ -2.26
YDR048CYDR048C CPR2P23285 205 aa0.92□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms