RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C SHY1P53266 389 aa3.31□□□□□ -1.88
RPN4YDL020C REX2P54964 269 aaKnown RBP3.31□□□□□ -1.88
RPN4YDL020C YOL075CQ08234 1294 aa3.31□□□□□ -1.88
RPN4YDL020C DET1Q99288 334 aaKnown RBP3.31□□□□□ -1.88
RPN4YDL020C CHA1P25379 360 aaKnown RBP3.3□□□□□ -1.88
RPN4YDL020C ZUO1P32527 433 aaKnown RBP3.3□□□□□ -1.88
RPN4YDL020C MRPS5P33759 307 aa3.3□□□□□ -1.88
RPN4YDL020C LIN1P38852 340 aaPredicted RBP3.3□□□□□ -1.88
RPN4YDL020C BAT1P38891 393 aaKnown RBP3.3□□□□□ -1.88
RPN4YDL020C PRE5P40302 234 aaKnown RBP3.3□□□□□ -1.88
RPN4YDL020C GAB1P41733 394 aa3.3□□□□□ -1.88
RPN4YDL020C CIN2P46670 268 aa3.3□□□□□ -1.88
RPN4YDL020C TRF5P48561 642 aaKnown RBP3.3□□□□□ -1.88
RPN4YDL020C LST7P53237 242 aa3.3□□□□□ -1.88
RPN4YDL020C GIS2P53849 153 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
RPN4YDL020C YMR010WQ03687 405 aa3.3□□□□□ -1.88
RPN4YDL020C YMR027WQ04371 470 aa3.3□□□□□ -1.88
RPN4YDL020C MGR3Q04472 501 aa3.3□□□□□ -1.88
RPN4YDL020C MYO2P19524 1574 aaKnown RBP3.3□□□□□ -1.88
RPN4YDL020C STU1P38198 1513 aa3.3□□□□□ -1.88
RPN4YDL020C POL1P13382 1468 aa3.3□□□□□ -1.88
RPN4YDL020C YLL053CP0CD98 152 aa3.29□□□□□ -1.88
RPN4YDL020C RPS18AP0CX55 146 aaKnown RBP3.29□□□□□ -1.88
RPN4YDL020C RPS18BP0CX56 146 aaPredicted RBP3.29□□□□□ -1.88
RPN4YDL020C REV1P12689 985 aa3.29□□□□□ -1.88
RPN4YDL020C MXR2P25566 168 aa3.29□□□□□ -1.88
RPN4YDL020C RPL16AP26784 199 aaKnown RBP3.29□□□□□ -1.88
RPN4YDL020C NUP2P32499 720 aa3.29□□□□□ -1.88
RPN4YDL020C ATG7P38862 630 aa3.29□□□□□ -1.88
RPN4YDL020C YGL114WP53134 725 aa3.29□□□□□ -1.88
RPN4YDL020C YNL146WP53906 100 aa3.29□□□□□ -1.88
RPN4YDL020C PRO2P54885 456 aaKnown RBP3.29□□□□□ -1.88
RPN4YDL020C YET2Q04210 160 aa3.29□□□□□ -1.88
RPN4YDL020C NAT4Q04751 285 aa3.29□□□□□ -1.88
RPN4YDL020C YHC1Q05900 231 aaKnown RBP3.29□□□□□ -1.88
RPN4YDL020C TMC1Q08422 150 aaPredicted RBP3.29□□□□□ -1.88
RPN4YDL020C APC5Q08683 685 aa3.29□□□□□ -1.88
RPN4YDL020C TAF2P23255 1407 aa3.29□□□□□ -1.88
RPN4YDL020C PRP39P39682 629 aaKnown RBP3.29□□□□□ -1.88
RPN4YDL020C YER186CP40101 306 aa3.29□□□□□ -1.88
RPN4YDL020C KEG1P43614 200 aa3.29□□□□□ -1.88
RPN4YDL020C AIP1P46680 615 aaKnown RBP3.29□□□□□ -1.88
RPN4YDL020C YJR030CP47101 745 aa3.29□□□□□ -1.88
RPN4YDL020C MHR1Q06630 226 aa3.29□□□□□ -1.88
RPN4YDL020C SPO24Q3E752 67 aa3.29□□□□□ -1.88
RPN4YDL020C RNR2P09938 399 aaKnown RBP3.28□□□□□ -1.88
RPN4YDL020C ARF2P19146 181 aaKnown RBP3.28□□□□□ -1.88
RPN4YDL020C LDB16P25587 256 aa3.28□□□□□ -1.88
RPN4YDL020C SUR1P33300 382 aa3.28□□□□□ -1.88
RPN4YDL020C LSM12P38828 187 aaKnown RBP3.28□□□□□ -1.88
RPN4YDL020C RBG1P39729 369 aa3.28□□□□□ -1.88
RPN4YDL020C YMR134WP40207 237 aa3.28□□□□□ -1.88
RPN4YDL020C SKI8Q02793 397 aaPredicted RBP3.28□□□□□ -1.88
RPN4YDL020C LIP2Q06005 328 aa3.28□□□□□ -1.88
RPN4YDL020C YDL109CQ12103 647 aa3.28□□□□□ -1.88
RPN4YDL020C HMS1Q12398 434 aa3.28□□□□□ -1.88
RPN4YDL020C ESP1Q03018 1630 aa3.28□□□□□ -1.88
RPN4YDL020C SWR1Q05471 1514 aa3.28□□□□□ -1.89
RPN4YDL020C TRM732Q03496 1420 aa3.27□□□□□ -1.89
RPN4YDL020C HEM4P06174 275 aa3.27□□□□□ -1.89
RPN4YDL020C UTR1P21373 530 aa3.27□□□□□ -1.89
RPN4YDL020C CIN8P27895 1000 aa3.27□□□□□ -1.89
RPN4YDL020C YKR015CP36111 568 aa3.27□□□□□ -1.89
RPN4YDL020C IST2P38250 946 aa3.27□□□□□ -1.89
RPN4YDL020C YPT35P38815 214 aaKnown RBP3.27□□□□□ -1.89
RPN4YDL020C CWC22P53333 577 aaKnown RBP3.27□□□□□ -1.89
RPN4YDL020C RTC5Q12108 567 aaKnown RBP3.27□□□□□ -1.89
RPN4YDL020C RGS2Q99188 309 aa3.27□□□□□ -1.89
RPN4YDL020C MON2P48563 1636 aaPredicted RBP3.26□□□□□ -1.89
RPN4YDL020C RPL23AP0CX41 137 aaKnown RBP3.26□□□□□ -1.89
RPN4YDL020C RPL23BP0CX42 137 aaKnown RBP3.26□□□□□ -1.89
RPN4YDL020C GAL3P13045 520 aa3.26□□□□□ -1.89
RPN4YDL020C CDC50P25656 391 aa3.26□□□□□ -1.89
RPN4YDL020C SPR1P32603 445 aa3.26□□□□□ -1.89
RPN4YDL020C OSW5P40219 148 aa3.26□□□□□ -1.89
RPN4YDL020C DFG10P40526 253 aa3.26□□□□□ -1.89
RPN4YDL020C YLR152CP54072 576 aa3.26□□□□□ -1.89
RPN4YDL020C MSC3Q05812 728 aa3.26□□□□□ -1.89
RPN4YDL020C MCT1Q12283 360 aa3.26□□□□□ -1.89
RPN4YDL020C UBA3Q99344 299 aa3.26□□□□□ -1.89
RPN4YDL020C RAD1P06777 1100 aa3.25□□□□□ -1.89
RPN4YDL020C GIT1P25346 518 aa3.25□□□□□ -1.89
RPN4YDL020C PEX32P38292 413 aa3.25□□□□□ -1.89
RPN4YDL020C SDS24P38314 527 aa3.25□□□□□ -1.89
RPN4YDL020C OM14P38325 134 aa3.25□□□□□ -1.89
RPN4YDL020C PFS1P38872 237 aa3.25□□□□□ -1.89
RPN4YDL020C TIM17P39515 158 aa3.25□□□□□ -1.89
RPN4YDL020C HEM14P40012 539 aa3.25□□□□□ -1.89
RPN4YDL020C SHE10P53075 577 aa3.25□□□□□ -1.89
RPN4YDL020C CSM3Q04659 317 aa3.25□□□□□ -1.89
RPN4YDL020C STE23Q06010 1027 aa3.25□□□□□ -1.89
RPN4YDL020C YDR262WQ12331 272 aa3.25□□□□□ -1.89
RPN4YDL020C SPP41P38904 1435 aa3.25□□□□□ -1.89
RPN4YDL020C ECM5Q03214 1411 aa3.25□□□□□ -1.89
RPN4YDL020C NUP170P38181 1502 aa3.25□□□□□ -1.89
RPN4YDL020C IKI3Q06706 1349 aaKnown RBP3.25□□□□□ -1.89
RPN4YDL020C CDC37P06101 506 aaKnown RBP3.25□□□□□ -1.89
RPN4YDL020C MKK1P32490 508 aa3.25□□□□□ -1.89
RPN4YDL020C MYO3P36006 1272 aa3.25□□□□□ -1.89
RPN4YDL020C YDR089WP38966 869 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms