RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 PCDHA12Q9UN75 941 aa16.87■□□□□ 0.29
PHGDH-231ENST00000641939 SPTBN5Q9NRC6 3674 aaKnown RBP16.86■□□□□ 0.29
PHGDH-231ENST00000641939 TMEM150BA6NC51 233 aa16.86■□□□□ 0.29
PHGDH-231ENST00000641939 GPR32O75388 356 aa16.86■□□□□ 0.29
PHGDH-231ENST00000641939 RPS6KA5O75582 802 aa16.86■□□□□ 0.29
PHGDH-231ENST00000641939 MCM7P33993 719 aa16.86■□□□□ 0.29
PHGDH-231ENST00000641939 ADGRE1Q14246 886 aa16.86■□□□□ 0.29
PHGDH-231ENST00000641939 TMEM266Q2M3C6 531 aa16.86■□□□□ 0.29
PHGDH-231ENST00000641939 ODR4Q5SWX8 454 aa16.86■□□□□ 0.29
PHGDH-231ENST00000641939 ANO5Q75V66 913 aa16.86■□□□□ 0.29
PHGDH-231ENST00000641939 NOSTRINQ8IVI9 506 aa16.86■□□□□ 0.29
PHGDH-231ENST00000641939 TMEM40Q8WWA1 233 aa16.86■□□□□ 0.29
PHGDH-231ENST00000641939 MTMR9Q96QG7 549 aa16.86■□□□□ 0.29
PHGDH-231ENST00000641939 CEP89Q96ST8 783 aa16.86■□□□□ 0.29
PHGDH-231ENST00000641939 YME1L1Q96TA2 773 aa16.86■□□□□ 0.29
PHGDH-231ENST00000641939 OSMRQ99650 979 aa16.86■□□□□ 0.29
PHGDH-231ENST00000641939 LXNQ9BS40 222 aa16.86■□□□□ 0.29
PHGDH-231ENST00000641939 TTC12Q9H892 705 aaPredicted RBP16.86■□□□□ 0.29
PHGDH-231ENST00000641939 NOC2LQ9Y3T9 749 aaKnown RBP16.86■□□□□ 0.29
PHGDH-231ENST00000641939 COL4A4P53420 1690 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-231ENST00000641939 LINC01553A4QN01 128 aa16.85■□□□□ 0.29
PHGDH-231ENST00000641939 IGFBP4P22692 258 aa16.85■□□□□ 0.29
PHGDH-231ENST00000641939 TXKP42681 527 aa16.85■□□□□ 0.29
PHGDH-231ENST00000641939 NLRP11P59045 1033 aaKnown RBP16.85■□□□□ 0.29
PHGDH-231ENST00000641939 NFX1Q12986 1120 aaKnown RBP16.85■□□□□ 0.29
PHGDH-231ENST00000641939 ORC2Q13416 577 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-231ENST00000641939 FAM43BQ6ZT52 329 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-231ENST00000641939 C4orf19Q8IY42 314 aa16.85■□□□□ 0.29
PHGDH-231ENST00000641939 SP7Q8TDD2 431 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-231ENST00000641939 ARNTL2Q8WYA1 636 aa16.85■□□□□ 0.29
PHGDH-231ENST00000641939 DYDC2Q96IM9 177 aa16.85■□□□□ 0.29
PHGDH-231ENST00000641939 TGS1Q96RS0 853 aaKnown RBP16.85■□□□□ 0.29
PHGDH-231ENST00000641939 SH2D3AQ9BRG2 576 aa16.85■□□□□ 0.29
PHGDH-231ENST00000641939 TSPYL2Q9H2G4 693 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-231ENST00000641939 ERVK-5Q9HDB9 667 aa16.85■□□□□ 0.29
PHGDH-231ENST00000641939 RGL1Q9NZL6 768 aa16.85■□□□□ 0.29
PHGDH-231ENST00000641939 WRAP73Q9P2S5 460 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-231ENST00000641939 ST3GAL5Q9UNP4 418 aa16.85■□□□□ 0.29
PHGDH-231ENST00000641939 COL4A6Q14031 1691 aa16.85■□□□□ 0.29
PHGDH-231ENST00000641939 RALGAPA2Q2PPJ7 1873 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 A0A0C4DFX4 3053 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 IGKV6-21A0A0C4DH24 114 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 EPOPA6NHQ4 379 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 GPR182O15218 404 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 U2AF2P26368 475 aaKnown RBP eCLIP16.84■□□□□ 0.29
PHGDH-231ENST00000641939 TRAPPC10P48553 1259 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 DNM2P50570 870 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 PLA2G4FQ68DD2 849 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 SPRED2Q7Z698 418 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 RTN4RL1Q86UN2 441 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-231ENST00000641939 SLC17A8Q8NDX2 589 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 LINC01599Q8WXQ3 324 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 EIF2AK1Q9BQI3 630 aaKnown RBP16.84■□□□□ 0.29
PHGDH-231ENST00000641939 JPH2Q9BR39 696 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-231ENST00000641939 TMEM60Q9H2L4 133 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 ADAMTS10Q9H324 1103 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 TMX1Q9H3N1 280 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 ZSWIM4Q9H7M6 989 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 CYP26B1Q9NR63 512 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 GTF3C3Q9Y5Q9 886 aa16.84■□□□□ 0.29
PHGDH-231ENST00000641939 RFXAPO00287 272 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 MAFO75444 373 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-231ENST00000641939 SLITRK3O94933 977 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 GJB2P29033 226 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 YWHABP31946 246 aaKnown RBP16.83■□□□□ 0.28
PHGDH-231ENST00000641939 GPC3P51654 580 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 NPEPPSP55786 919 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 ERVK-21P61565 698 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 CDC42EP1Q00587 391 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 CYP4A11Q02928 519 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 CTTNQ14247 550 aaKnown RBP16.83■□□□□ 0.28
PHGDH-231ENST00000641939 ZNF174Q15697 407 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 TTC38Q5R3I4 469 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 OTUD6AQ7L8S5 288 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 FAM228AQ86W67 206 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 TPH2Q8IWU9 490 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 NEK9Q8TD19 979 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 CEP170P1Q96L14 293 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 NOL7Q9UMY1 257 aaKnown RBP16.83■□□□□ 0.28
PHGDH-231ENST00000641939 PPME1Q9Y570 386 aa16.83■□□□□ 0.28
PHGDH-231ENST00000641939 EIF4BP23588 611 aaKnown RBP16.82■□□□□ 0.28
PHGDH-231ENST00000641939 DRP2Q13474 957 aa16.82■□□□□ 0.28
PHGDH-231ENST00000641939 EXOC8Q8IYI6 725 aa16.82■□□□□ 0.28
PHGDH-231ENST00000641939 SCLT1Q96NL6 688 aa16.82■□□□□ 0.28
PHGDH-231ENST00000641939 HSD17B14Q9BPX1 270 aa16.82■□□□□ 0.28
PHGDH-231ENST00000641939 SUCLA2Q9P2R7 463 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-231ENST00000641939 MTUS1Q9ULD2 1270 aa16.82■□□□□ 0.28
PHGDH-231ENST00000641939 SMC3Q9UQE7 1217 aa16.82■□□□□ 0.28
PHGDH-231ENST00000641939 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-231ENST00000641939 DENND3A2RUS2 1198 aa16.81■□□□□ 0.28
PHGDH-231ENST00000641939 POTEMA6NI47 508 aa16.81■□□□□ 0.28
PHGDH-231ENST00000641939 OR52Z1P0C646 297 aa16.81■□□□□ 0.28
PHGDH-231ENST00000641939 STAG3L1P0CL83 205 aa16.81■□□□□ 0.28
PHGDH-231ENST00000641939 POU3F3P20264 500 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-231ENST00000641939 POLGP54098 1239 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-231ENST00000641939 NPAS4Q8IUM7 802 aa16.81■□□□□ 0.28
PHGDH-231ENST00000641939 CRIPAKQ8N1N5 446 aa16.81■□□□□ 0.28
PHGDH-231ENST00000641939 ZNF579Q8NAF0 562 aaKnown RBP16.81■□□□□ 0.28
PHGDH-231ENST00000641939 NLRP7Q8WX94 980 aa16.81■□□□□ 0.28
PHGDH-231ENST00000641939 SLC7A3Q8WY07 619 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms