RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 PRDM4Q9UKN5 801 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 NDUFB10O96000 172 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 FXR2P51116 673 aaKnown RBP eCLIP9.07□□□□□ -0.963e-11■□□□□ 9.5
HNRNPU-222ENST00000639880 BFSP1Q12934 665 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 MTERF2Q49AM1 385 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 CDC42EP5Q6NZY7 148 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 XXYLT1Q8NBI6 393 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 NKX2-3Q8TAU0 364 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 RSAD2Q8WXG1 361 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 LXNQ9BS40 222 aa9.07□□□□□ -0.96
HNRNPU-222ENST00000639880 BCL9O00512 1426 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 JCADQ9P266 1359 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 A0A1B0GUA9 196 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 PDXKO00764 312 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 ECE2O60344 883 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 GALCP54803 685 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 TNFAIP1Q13829 316 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 GJB7Q6PEY0 223 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 CEP128Q6ZU80 1094 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 SH3RF1Q7Z6J0 888 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 FRMD5Q7Z6J6 570 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 PALM2Q8IXS6 379 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 RPUSD2Q8IZ73 545 aaKnown RBP9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 FLAD1Q8NFF5 587 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 ATP6V0A1Q93050 837 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 ATP6V1G3Q96LB4 118 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 A0A1W2PQJ5 194 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 TTI1O43156 1089 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 PCK1P35558 622 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 HIBCHQ6NVY1 386 aaPredicted RBP9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 SCYL2Q6P3W7 929 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 DAGLBQ8NCG7 672 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 KIAA0895Q8NCT3 520 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 GDAP1Q8TB36 358 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 ANKS1AQ92625 1134 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 SAAL1Q96ER3 474 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 ELAC2Q9BQ52 826 aaKnown RBP9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 JPH2Q9BR39 696 aaPredicted RBP9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 ANAPC7Q9UJX3 599 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 ANAPC5Q9UJX4 755 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 EMSYQ7Z589 1322 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 GOLGA8SH3BPF8 625 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 RAD51CO43502 376 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 EVI5O60447 810 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 RPSAP08865 295 aaKnown RBP9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 CD58P19256 250 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 IRAK1P51617 712 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 RWDD2BP57060 319 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 DYNLT1P63172 113 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 GPC5P78333 572 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 BRDTQ58F21 947 aaPredicted RBP9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 RC3H1Q5TC82 1133 aaKnown RBP9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 BSPRYQ5W0U4 402 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 CENPPQ6IPU0 288 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 CATSPER3Q86XQ3 398 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 SP8Q8IXZ3 490 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 ZIM3Q96PE6 472 aa9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 DUSP9Q99956 384 aaKnown RBP9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 INTS2Q9H0H0 1204 aaKnown RBP9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 CNOT8Q9UFF9 292 aaKnown RBP9.06□□□□□ -0.96
HNRNPU-222ENST00000639880 HSPA6P17066 643 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 GBP1P32455 592 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 NFIAQ12857 509 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 MTMR1Q13613 665 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 ZNF394Q53GI3 561 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 WDR93Q6P2C0 686 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 CASC4Q6P4E1 433 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 EEPD1Q7L9B9 569 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 SLC7A3Q8WY07 619 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 RNPC3Q96LT9 517 aaKnown RBP9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 PACSIN1Q9BY11 444 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 CHORDC1Q9UHD1 332 aaPredicted RBP9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 GRID2IPA4D2P6 1211 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 SUN1O94901 812 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 ZRANB2O95218 330 aaKnown RBP eCLIP9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 EYA4O95677 639 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 MMEP08473 750 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 TMEM191BP0C7N4 346 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 ADRA2BP18089 450 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 SOX5P35711 763 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 VAMP7P51809 220 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 BPIFB4P59827 614 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 ANKRD20A3Q5VUR7 823 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 PAPD7Q5XG87 772 aaKnown RBP9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 PASD1Q8IV76 773 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 RFFLQ8WZ73 363 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 STMN2Q93045 179 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 MCUR1Q96AQ8 359 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 THOC1Q96FV9 657 aaKnown RBP9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 PSMD1Q99460 953 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 NUDT12Q9BQG2 462 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 TRIM51Q9BSJ1 452 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 RAVER2Q9HCJ3 691 aaKnown RBP9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 RGPD8O14715 1765 aaPredicted RBP9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 TNS2Q63HR2 1409 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 FER1L4A9Z1Z3 1794 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 AKAP12Q02952 1782 aa9.05□□□□□ -0.96
HNRNPU-222ENST00000639880 ESYT2A0FGR8 921 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms