RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 VAC14Q08AM6 782 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 COASYQ13057 564 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 PAK2Q13177 524 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 CAMK1Q14012 370 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 DESI1Q6ICB0 168 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 CASC1Q6TDU7 716 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 EP400NLQ6ZTU2 488 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 HFE2Q6ZVN8 426 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 BMP8AQ7Z5Y6 402 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 SGMS1Q86VZ5 419 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 TMTC2Q8N394 836 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 SRBD1Q8N5C6 995 aaKnown RBP6.28□□□□□ -1.4
PDE4D-229ENST00000638939 EFHBQ8N7U6 833 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 EXOC6Q8TAG9 804 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 DNAJB3Q8WWF6 145 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 GLG1Q92896 1179 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 MAP4K1Q92918 833 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 MFSD14AQ96MC6 490 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 KCNK17Q96T54 332 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 MYL10Q9BUA6 226 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 ALG2Q9H553 416 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 AGO3Q9H9G7 860 aaKnown RBP6.28□□□□□ -1.4
PDE4D-229ENST00000638939 SLC9A2Q9UBY0 812 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 MUTYHQ9UIF7 546 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 RABGEF1Q9UJ41 708 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 PLAGL2Q9UPG8 496 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 SUPT16HQ9Y5B9 1047 aaKnown RBP6.28□□□□□ -1.4
PDE4D-229ENST00000638939 PCDHA2Q9Y5H9 948 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 RBM8AQ9Y5S9 174 aaKnown RBP6.28□□□□□ -1.4
PDE4D-229ENST00000638939 MRPL42Q9Y6G3 142 aaKnown RBP6.28□□□□□ -1.4
PDE4D-229ENST00000638939 DOCK8Q8NF50 2099 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 ZNF292O60281 2723 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 MIA3Q5JRA6 1907 aa6.28□□□□□ -1.4
PDE4D-229ENST00000638939 RIF1Q5UIP0 2472 aaKnown RBP6.27□□□□□ -1.4
PDE4D-229ENST00000638939 CNTNAP5Q8WYK1 1306 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 IGKV6D-21A0A0A0MT36 114 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 SMIM35A0A1B0GVV1 85 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 CCDC69A6NI79 296 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 LOC730098B7Z3J9 87 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 hCG_1984214I3L0E3 225 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 STXBP3O00186 592 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 LINC01565O15544 149 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 GLP2RO95838 553 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 ITGB1P05556 798 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 SCG2P13521 617 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 INSRRP14616 1297 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 DNAJB1P25685 340 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 MCM5P33992 734 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 GTF2F1P35269 517 aaKnown RBP eCLIP6.27□□□□□ -1.41
PDE4D-229ENST00000638939 MRE11P49959 708 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 ACTR2P61160 394 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 ADAM15Q13444 863 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 CBX2Q14781 532 aaPredicted RBP6.27□□□□□ -1.41
PDE4D-229ENST00000638939 CLUL1Q15846 466 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 PKN1Q16512 942 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 UBE2SQ16763 222 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 TMTC3Q6ZXV5 915 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 NIPA1Q7RTP0 329 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 PLPPR4Q7Z2D5 763 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 LAPTM4BQ86VI4 370 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 RNF135Q8IUD6 432 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 ZNF713Q8N859 430 aaPredicted RBP6.27□□□□□ -1.41
PDE4D-229ENST00000638939 PIBF1Q8WXW3 757 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 EDAQ92838 391 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 FBXL18Q96ME1 805 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 UIMC1Q96RL1 719 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 PCYT2Q99447 389 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 CDCA3Q99618 268 aaPredicted RBP6.27□□□□□ -1.41
PDE4D-229ENST00000638939 PRRX2Q99811 253 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 SDF4Q9BRK5 362 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 CELF4Q9BZC1 486 aaKnown RBP6.27□□□□□ -1.41
PDE4D-229ENST00000638939 AZI2Q9H6S1 392 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 VRTNQ9H8Y1 702 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 ALG13Q9NP73 1137 aaKnown RBP6.27□□□□□ -1.41
PDE4D-229ENST00000638939 KCNH7Q9NS40 1196 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 KIAA1468Q9P260 1216 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 PADI3Q9ULW8 664 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 PCDHA6Q9UN73 950 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 PCDHA8Q9Y5H6 950 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 GVINP1Q7Z2Y8 2422 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 CACNA1AO00555 2505 aa6.27□□□□□ -1.41
PDE4D-229ENST00000638939 ZFHX2Q9C0A1 2572 aaPredicted RBP6.26□□□□□ -1.41
PDE4D-229ENST00000638939 C3orf80F5H4A9 247 aa6.26□□□□□ -1.41
PDE4D-229ENST00000638939 FOSP01100 380 aaPredicted RBP6.26□□□□□ -1.41
PDE4D-229ENST00000638939 ATF7P17544 494 aaPredicted RBP6.26□□□□□ -1.41
PDE4D-229ENST00000638939 SREBF1P36956 1147 aa6.26□□□□□ -1.41
PDE4D-229ENST00000638939 SARSP49591 514 aaKnown RBP6.26□□□□□ -1.41
PDE4D-229ENST00000638939 IGBP1P78318 339 aa6.26□□□□□ -1.41
PDE4D-229ENST00000638939 KRT76Q01546 638 aa6.26□□□□□ -1.41
PDE4D-229ENST00000638939 AP3B2Q13367 1082 aa6.26□□□□□ -1.41
PDE4D-229ENST00000638939 PLCB4Q15147 1175 aa6.26□□□□□ -1.41
PDE4D-229ENST00000638939 CEP55Q53EZ4 464 aa6.26□□□□□ -1.41
PDE4D-229ENST00000638939 ODR4Q5SWX8 454 aa6.26□□□□□ -1.41
PDE4D-229ENST00000638939 SWT1Q5T5J6 900 aaKnown RBP6.26□□□□□ -1.41
PDE4D-229ENST00000638939 WWC2Q6AWC2 1192 aa6.26□□□□□ -1.41
PDE4D-229ENST00000638939 PDE12Q6L8Q7 609 aaKnown RBP6.26□□□□□ -1.41
PDE4D-229ENST00000638939 MTHFD1LQ6UB35 978 aa6.26□□□□□ -1.41
PDE4D-229ENST00000638939 NFXL1Q6ZNB6 911 aa6.26□□□□□ -1.41
PDE4D-229ENST00000638939 SND1Q7KZF4 910 aaKnown RBP eCLIP6.26□□□□□ -1.41
PDE4D-229ENST00000638939 HEATR3Q7Z4Q2 680 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms